data_1O87
#
_model_server_result.job_id            TKOSx-O0zFLrAYkKJnvN6w 
_model_server_result.datetime_utc      '2024-12-26 22:23:28' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1o87 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"L","auth_seq_id":1299}' 
#
_entry.id    1O87 
#
_exptl.entry_id    1O87 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              443.201 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "GUANOSINE-5'-DIPHOSPHATE" 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          111.76 
_cell.angle_gamma         90 
_cell.entry_id            1O87 
_cell.length_a            55.415 
_cell.length_b            113.631 
_cell.length_c            61.382 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1O87 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PQS monomeric 1 author_and_software_defined_assembly 1 
PQS monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,G,H,O 1 1 
B,I,J,K,L,M,N,P 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 F N N 
? 4 L N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OG1 THR 112 A THR 112 1_555 G MG MG . A MG 1300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.081 ? 
metalc ? metalc2 A O ASP 212 A ASP 212 1_555 H MG MG . A MG 1301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.163 ? 
metalc ? metalc3 F O1B GDP . A GDP 1299 1_555 G MG MG . A MG 1300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.082 ? 
metalc ? metalc4 G MG MG . A MG 1300 1_555 O O HOH . A HOH 2055 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.07 ? 
metalc ? metalc5 G MG MG . A MG 1300 1_555 O O HOH . A HOH 2074 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.11 ? 
metalc ? metalc6 G MG MG . A MG 1300 1_555 O O HOH . A HOH 2127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.083 ? 
metalc ? metalc7 G MG MG . A MG 1300 1_555 O O HOH . A HOH 2128 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? 
metalc ? metalc8 H MG MG . A MG 1301 1_555 O O HOH . A HOH 2032 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.137 ? 
metalc ? metalc9 H MG MG . A MG 1301 1_555 O O HOH . A HOH 2090 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.204 ? 
metalc ? metalc10 H MG MG . A MG 1301 1_555 O O HOH . A HOH 2091 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.205 ? 
metalc ? metalc11 H MG MG . A MG 1301 1_555 O O HOH . A HOH 2092 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.234 ? 
metalc ? metalc12 B OG1 THR 112 B THR 112 1_555 M MG MG . B MG 1300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
metalc ? metalc13 B O ASP 212 B ASP 212 1_555 N MG MG . B MG 1301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.176 ? 
metalc ? metalc14 L O1B GDP . B GDP 1299 1_555 M MG MG . B MG 1300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? 
metalc ? metalc15 M MG MG . B MG 1300 1_555 P O HOH . B HOH 2067 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.086 ? 
metalc ? metalc16 M MG MG . B MG 1300 1_555 P O HOH . B HOH 2098 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.072 ? 
metalc ? metalc17 M MG MG . B MG 1300 1_555 P O HOH . B HOH 2143 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? 
metalc ? metalc18 N MG MG . B MG 1301 1_555 P O HOH . B HOH 2116 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.183 ? 
metalc ? metalc19 N MG MG . B MG 1301 1_555 P O HOH . B HOH 2117 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.192 ? 
#
_chem_comp.formula           'C10 H15 N5 O11 P2' 
_chem_comp.formula_weight    443.201 
_chem_comp.id                GDP 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              "GUANOSINE-5'-DIPHOSPHATE" 
_chem_comp.type              'rna linking' 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PB O1B GDP doub 74 n n 
PB O2B GDP sing 75 n n 
PB O3B GDP sing 76 n n 
PB O3A GDP sing 77 n n 
O2B HOB2 GDP sing 78 n n 
O3B HOB3 GDP sing 79 n n 
O3A PA GDP sing 80 n n 
PA O1A GDP doub 81 n n 
PA O2A GDP sing 82 n n 
PA O5' GDP sing 83 n n 
O2A HOA2 GDP sing 84 n n 
O5' C5' GDP sing 85 n n 
C5' C4' GDP sing 86 n n 
C5' H5' GDP sing 87 n n 
C5' "H5''" GDP sing 88 n n 
C4' O4' GDP sing 89 n n 
C4' C3' GDP sing 90 n n 
C4' H4' GDP sing 91 n n 
O4' C1' GDP sing 92 n n 
C3' O3' GDP sing 93 n n 
C3' C2' GDP sing 94 n n 
C3' H3' GDP sing 95 n n 
O3' HO3' GDP sing 96 n n 
C2' O2' GDP sing 97 n n 
C2' C1' GDP sing 98 n n 
C2' H2' GDP sing 99 n n 
O2' HO2' GDP sing 100 n n 
C1' N9 GDP sing 101 n n 
C1' H1' GDP sing 102 n n 
N9 C8 GDP sing 103 n y 
N9 C4 GDP sing 104 n y 
C8 N7 GDP doub 105 n y 
C8 H8 GDP sing 106 n n 
N7 C5 GDP sing 107 n y 
C5 C6 GDP sing 108 n n 
C5 C4 GDP doub 109 n y 
C6 O6 GDP doub 110 n n 
C6 N1 GDP sing 111 n n 
N1 C2 GDP sing 112 n n 
N1 HN1 GDP sing 113 n n 
C2 N2 GDP sing 114 n n 
C2 N3 GDP doub 115 n n 
N2 HN21 GDP sing 116 n n 
N2 HN22 GDP sing 117 n n 
N3 C4 GDP sing 118 n n 
#
_atom_sites.entry_id                     1O87 
_atom_sites.fract_transf_matrix[1][1]    0.018046 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.007203 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.0088 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.017541 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 CL A 1 1296 1296 CL CL . 
D 3 FMT A 1 1297 1297 FMT FMT . 
E 3 FMT A 1 1298 1298 FMT FMT . 
F 4 GDP A 1 1299 1299 GDP GDP . 
G 5 MG A 1 1300 1300 MG MG . 
H 5 MG A 1 1301 1301 MG MG . 
I 3 FMT B 1 1296 1296 FMT FMT . 
J 3 FMT B 1 1297 1297 FMT FMT . 
K 3 FMT B 1 1298 1298 FMT FMT . 
L 4 GDP B 1 1299 1299 GDP GDP . 
M 5 MG B 1 1300 1300 MG MG . 
N 5 MG B 1 1301 1301 MG MG . 
O 6 HOH A 1 2001 2001 HOH HOH . 
O 6 HOH A 2 2002 2002 HOH HOH . 
O 6 HOH A 3 2003 2003 HOH HOH . 
O 6 HOH A 4 2004 2004 HOH HOH . 
O 6 HOH A 5 2005 2005 HOH HOH . 
O 6 HOH A 6 2006 2006 HOH HOH . 
O 6 HOH A 7 2007 2007 HOH HOH . 
O 6 HOH A 8 2008 2008 HOH HOH . 
O 6 HOH A 9 2009 2009 HOH HOH . 
O 6 HOH A 10 2010 2010 HOH HOH . 
O 6 HOH A 11 2011 2011 HOH HOH . 
O 6 HOH A 12 2012 2012 HOH HOH . 
O 6 HOH A 13 2013 2013 HOH HOH . 
O 6 HOH A 14 2014 2014 HOH HOH . 
O 6 HOH A 15 2015 2015 HOH HOH . 
O 6 HOH A 16 2016 2016 HOH HOH . 
O 6 HOH A 17 2017 2017 HOH HOH . 
O 6 HOH A 18 2018 2018 HOH HOH . 
O 6 HOH A 19 2019 2019 HOH HOH . 
O 6 HOH A 20 2020 2020 HOH HOH . 
O 6 HOH A 21 2021 2021 HOH HOH . 
O 6 HOH A 22 2022 2022 HOH HOH . 
O 6 HOH A 23 2023 2023 HOH HOH . 
O 6 HOH A 24 2024 2024 HOH HOH . 
O 6 HOH A 25 2025 2025 HOH HOH . 
O 6 HOH A 26 2026 2026 HOH HOH . 
O 6 HOH A 27 2027 2027 HOH HOH . 
O 6 HOH A 28 2028 2028 HOH HOH . 
O 6 HOH A 29 2029 2029 HOH HOH . 
O 6 HOH A 30 2030 2030 HOH HOH . 
O 6 HOH A 31 2031 2031 HOH HOH . 
O 6 HOH A 32 2032 2032 HOH HOH . 
O 6 HOH A 33 2033 2033 HOH HOH . 
O 6 HOH A 34 2034 2034 HOH HOH . 
O 6 HOH A 35 2035 2035 HOH HOH . 
O 6 HOH A 36 2036 2036 HOH HOH . 
O 6 HOH A 37 2037 2037 HOH HOH . 
O 6 HOH A 38 2038 2038 HOH HOH . 
O 6 HOH A 39 2039 2039 HOH HOH . 
O 6 HOH A 40 2040 2040 HOH HOH . 
O 6 HOH A 41 2041 2041 HOH HOH . 
O 6 HOH A 42 2042 2042 HOH HOH . 
O 6 HOH A 43 2043 2043 HOH HOH . 
O 6 HOH A 44 2044 2044 HOH HOH . 
O 6 HOH A 45 2045 2045 HOH HOH . 
O 6 HOH A 46 2046 2046 HOH HOH . 
O 6 HOH A 47 2047 2047 HOH HOH . 
O 6 HOH A 48 2048 2048 HOH HOH . 
O 6 HOH A 49 2049 2049 HOH HOH . 
O 6 HOH A 50 2050 2050 HOH HOH . 
O 6 HOH A 51 2051 2051 HOH HOH . 
O 6 HOH A 52 2052 2052 HOH HOH . 
O 6 HOH A 53 2053 2053 HOH HOH . 
O 6 HOH A 54 2054 2054 HOH HOH . 
O 6 HOH A 55 2055 2055 HOH HOH . 
O 6 HOH A 56 2056 2056 HOH HOH . 
O 6 HOH A 57 2057 2057 HOH HOH . 
O 6 HOH A 58 2058 2058 HOH HOH . 
O 6 HOH A 59 2059 2059 HOH HOH . 
O 6 HOH A 60 2060 2060 HOH HOH . 
O 6 HOH A 61 2061 2061 HOH HOH . 
O 6 HOH A 62 2062 2062 HOH HOH . 
O 6 HOH A 63 2063 2063 HOH HOH . 
O 6 HOH A 64 2064 2064 HOH HOH . 
O 6 HOH A 65 2065 2065 HOH HOH . 
O 6 HOH A 66 2066 2066 HOH HOH . 
O 6 HOH A 67 2067 2067 HOH HOH . 
O 6 HOH A 68 2068 2068 HOH HOH . 
O 6 HOH A 69 2069 2069 HOH HOH . 
O 6 HOH A 70 2070 2070 HOH HOH . 
O 6 HOH A 71 2071 2071 HOH HOH . 
O 6 HOH A 72 2072 2072 HOH HOH . 
O 6 HOH A 73 2073 2073 HOH HOH . 
O 6 HOH A 74 2074 2074 HOH HOH . 
O 6 HOH A 75 2075 2075 HOH HOH . 
O 6 HOH A 76 2076 2076 HOH HOH . 
O 6 HOH A 77 2077 2077 HOH HOH . 
O 6 HOH A 78 2078 2078 HOH HOH . 
O 6 HOH A 79 2079 2079 HOH HOH . 
O 6 HOH A 80 2080 2080 HOH HOH . 
O 6 HOH A 81 2081 2081 HOH HOH . 
O 6 HOH A 82 2082 2082 HOH HOH . 
O 6 HOH A 83 2083 2083 HOH HOH . 
O 6 HOH A 84 2084 2084 HOH HOH . 
O 6 HOH A 85 2085 2085 HOH HOH . 
O 6 HOH A 86 2086 2086 HOH HOH . 
O 6 HOH A 87 2087 2087 HOH HOH . 
O 6 HOH A 88 2088 2088 HOH HOH . 
O 6 HOH A 89 2089 2089 HOH HOH . 
O 6 HOH A 90 2090 2090 HOH HOH . 
O 6 HOH A 91 2091 2091 HOH HOH . 
O 6 HOH A 92 2092 2092 HOH HOH . 
O 6 HOH A 93 2093 2093 HOH HOH . 
O 6 HOH A 94 2094 2094 HOH HOH . 
O 6 HOH A 95 2095 2095 HOH HOH . 
O 6 HOH A 96 2096 2096 HOH HOH . 
O 6 HOH A 97 2097 2097 HOH HOH . 
O 6 HOH A 98 2098 2098 HOH HOH . 
O 6 HOH A 99 2099 2099 HOH HOH . 
O 6 HOH A 100 2100 2100 HOH HOH . 
O 6 HOH A 101 2101 2101 HOH HOH . 
O 6 HOH A 102 2102 2102 HOH HOH . 
O 6 HOH A 103 2103 2103 HOH HOH . 
O 6 HOH A 104 2104 2104 HOH HOH . 
O 6 HOH A 105 2105 2105 HOH HOH . 
O 6 HOH A 106 2106 2106 HOH HOH . 
O 6 HOH A 107 2107 2107 HOH HOH . 
O 6 HOH A 108 2108 2108 HOH HOH . 
O 6 HOH A 109 2109 2109 HOH HOH . 
O 6 HOH A 110 2110 2110 HOH HOH . 
O 6 HOH A 111 2111 2111 HOH HOH . 
O 6 HOH A 112 2112 2112 HOH HOH . 
O 6 HOH A 113 2113 2113 HOH HOH . 
O 6 HOH A 114 2114 2114 HOH HOH . 
O 6 HOH A 115 2115 2115 HOH HOH . 
O 6 HOH A 116 2116 2116 HOH HOH . 
O 6 HOH A 117 2117 2117 HOH HOH . 
O 6 HOH A 118 2118 2118 HOH HOH . 
O 6 HOH A 119 2119 2119 HOH HOH . 
O 6 HOH A 120 2120 2120 HOH HOH . 
O 6 HOH A 121 2121 2121 HOH HOH . 
O 6 HOH A 122 2122 2122 HOH HOH . 
O 6 HOH A 123 2123 2123 HOH HOH . 
O 6 HOH A 124 2124 2124 HOH HOH . 
O 6 HOH A 125 2125 2125 HOH HOH . 
O 6 HOH A 126 2126 2126 HOH HOH . 
O 6 HOH A 127 2127 2127 HOH HOH . 
O 6 HOH A 128 2128 2128 HOH HOH . 
O 6 HOH A 129 2129 2129 HOH HOH . 
O 6 HOH A 130 2130 2130 HOH HOH . 
P 6 HOH B 1 2001 2001 HOH HOH . 
P 6 HOH B 2 2002 2002 HOH HOH . 
P 6 HOH B 3 2003 2003 HOH HOH . 
P 6 HOH B 4 2004 2004 HOH HOH . 
P 6 HOH B 5 2005 2005 HOH HOH . 
P 6 HOH B 6 2006 2006 HOH HOH . 
P 6 HOH B 7 2007 2007 HOH HOH . 
P 6 HOH B 8 2008 2008 HOH HOH . 
P 6 HOH B 9 2009 2009 HOH HOH . 
P 6 HOH B 10 2010 2010 HOH HOH . 
P 6 HOH B 11 2011 2011 HOH HOH . 
P 6 HOH B 12 2012 2012 HOH HOH . 
P 6 HOH B 13 2013 2013 HOH HOH . 
P 6 HOH B 14 2014 2014 HOH HOH . 
P 6 HOH B 15 2015 2015 HOH HOH . 
P 6 HOH B 16 2016 2016 HOH HOH . 
P 6 HOH B 17 2017 2017 HOH HOH . 
P 6 HOH B 18 2018 2018 HOH HOH . 
P 6 HOH B 19 2019 2019 HOH HOH . 
P 6 HOH B 20 2020 2020 HOH HOH . 
P 6 HOH B 21 2021 2021 HOH HOH . 
P 6 HOH B 22 2022 2022 HOH HOH . 
P 6 HOH B 23 2023 2023 HOH HOH . 
P 6 HOH B 24 2024 2024 HOH HOH . 
P 6 HOH B 25 2025 2025 HOH HOH . 
P 6 HOH B 26 2026 2026 HOH HOH . 
P 6 HOH B 27 2027 2027 HOH HOH . 
P 6 HOH B 28 2028 2028 HOH HOH . 
P 6 HOH B 29 2029 2029 HOH HOH . 
P 6 HOH B 30 2030 2030 HOH HOH . 
P 6 HOH B 31 2031 2031 HOH HOH . 
P 6 HOH B 32 2032 2032 HOH HOH . 
P 6 HOH B 33 2033 2033 HOH HOH . 
P 6 HOH B 34 2034 2034 HOH HOH . 
P 6 HOH B 35 2035 2035 HOH HOH . 
P 6 HOH B 36 2036 2036 HOH HOH . 
P 6 HOH B 37 2037 2037 HOH HOH . 
P 6 HOH B 38 2038 2038 HOH HOH . 
P 6 HOH B 39 2039 2039 HOH HOH . 
P 6 HOH B 40 2040 2040 HOH HOH . 
P 6 HOH B 41 2041 2041 HOH HOH . 
P 6 HOH B 42 2042 2042 HOH HOH . 
P 6 HOH B 43 2043 2043 HOH HOH . 
P 6 HOH B 44 2044 2044 HOH HOH . 
P 6 HOH B 45 2045 2045 HOH HOH . 
P 6 HOH B 46 2046 2046 HOH HOH . 
P 6 HOH B 47 2047 2047 HOH HOH . 
P 6 HOH B 48 2048 2048 HOH HOH . 
P 6 HOH B 49 2049 2049 HOH HOH . 
P 6 HOH B 50 2050 2050 HOH HOH . 
P 6 HOH B 51 2051 2051 HOH HOH . 
P 6 HOH B 52 2052 2052 HOH HOH . 
P 6 HOH B 53 2053 2053 HOH HOH . 
P 6 HOH B 54 2054 2054 HOH HOH . 
P 6 HOH B 55 2055 2055 HOH HOH . 
P 6 HOH B 56 2056 2056 HOH HOH . 
P 6 HOH B 57 2057 2057 HOH HOH . 
P 6 HOH B 58 2058 2058 HOH HOH . 
P 6 HOH B 59 2059 2059 HOH HOH . 
P 6 HOH B 60 2060 2060 HOH HOH . 
P 6 HOH B 61 2061 2061 HOH HOH . 
P 6 HOH B 62 2062 2062 HOH HOH . 
P 6 HOH B 63 2063 2063 HOH HOH . 
P 6 HOH B 64 2064 2064 HOH HOH . 
P 6 HOH B 65 2065 2065 HOH HOH . 
P 6 HOH B 66 2066 2066 HOH HOH . 
P 6 HOH B 67 2067 2067 HOH HOH . 
P 6 HOH B 68 2068 2068 HOH HOH . 
P 6 HOH B 69 2069 2069 HOH HOH . 
P 6 HOH B 70 2070 2070 HOH HOH . 
P 6 HOH B 71 2071 2071 HOH HOH . 
P 6 HOH B 72 2072 2072 HOH HOH . 
P 6 HOH B 73 2073 2073 HOH HOH . 
P 6 HOH B 74 2074 2074 HOH HOH . 
P 6 HOH B 75 2075 2075 HOH HOH . 
P 6 HOH B 76 2076 2076 HOH HOH . 
P 6 HOH B 77 2077 2077 HOH HOH . 
P 6 HOH B 78 2078 2078 HOH HOH . 
P 6 HOH B 79 2079 2079 HOH HOH . 
P 6 HOH B 80 2080 2080 HOH HOH . 
P 6 HOH B 81 2081 2081 HOH HOH . 
P 6 HOH B 82 2082 2082 HOH HOH . 
P 6 HOH B 83 2083 2083 HOH HOH . 
P 6 HOH B 84 2084 2084 HOH HOH . 
P 6 HOH B 85 2085 2085 HOH HOH . 
P 6 HOH B 86 2086 2086 HOH HOH . 
P 6 HOH B 87 2087 2087 HOH HOH . 
P 6 HOH B 88 2088 2088 HOH HOH . 
P 6 HOH B 89 2089 2089 HOH HOH . 
P 6 HOH B 90 2090 2090 HOH HOH . 
P 6 HOH B 91 2091 2091 HOH HOH . 
P 6 HOH B 92 2092 2092 HOH HOH . 
P 6 HOH B 93 2093 2093 HOH HOH . 
P 6 HOH B 94 2094 2094 HOH HOH . 
P 6 HOH B 95 2095 2095 HOH HOH . 
P 6 HOH B 96 2096 2096 HOH HOH . 
P 6 HOH B 97 2097 2097 HOH HOH . 
P 6 HOH B 98 2098 2098 HOH HOH . 
P 6 HOH B 99 2099 2099 HOH HOH . 
P 6 HOH B 100 2100 2100 HOH HOH . 
P 6 HOH B 101 2101 2101 HOH HOH . 
P 6 HOH B 102 2102 2102 HOH HOH . 
P 6 HOH B 103 2103 2103 HOH HOH . 
P 6 HOH B 104 2104 2104 HOH HOH . 
P 6 HOH B 105 2105 2105 HOH HOH . 
P 6 HOH B 106 2106 2106 HOH HOH . 
P 6 HOH B 107 2107 2107 HOH HOH . 
P 6 HOH B 108 2108 2108 HOH HOH . 
P 6 HOH B 109 2109 2109 HOH HOH . 
P 6 HOH B 110 2110 2110 HOH HOH . 
P 6 HOH B 111 2111 2111 HOH HOH . 
P 6 HOH B 112 2112 2112 HOH HOH . 
P 6 HOH B 113 2113 2113 HOH HOH . 
P 6 HOH B 114 2114 2114 HOH HOH . 
P 6 HOH B 115 2115 2115 HOH HOH . 
P 6 HOH B 116 2116 2116 HOH HOH . 
P 6 HOH B 117 2117 2117 HOH HOH . 
P 6 HOH B 118 2118 2118 HOH HOH . 
P 6 HOH B 119 2119 2119 HOH HOH . 
P 6 HOH B 120 2120 2120 HOH HOH . 
P 6 HOH B 121 2121 2121 HOH HOH . 
P 6 HOH B 122 2122 2122 HOH HOH . 
P 6 HOH B 123 2123 2123 HOH HOH . 
P 6 HOH B 124 2124 2124 HOH HOH . 
P 6 HOH B 125 2125 2125 HOH HOH . 
P 6 HOH B 126 2126 2126 HOH HOH . 
P 6 HOH B 127 2127 2127 HOH HOH . 
P 6 HOH B 128 2128 2128 HOH HOH . 
P 6 HOH B 129 2129 2129 HOH HOH . 
P 6 HOH B 130 2130 2130 HOH HOH . 
P 6 HOH B 131 2131 2131 HOH HOH . 
P 6 HOH B 132 2132 2132 HOH HOH . 
P 6 HOH B 133 2133 2133 HOH HOH . 
P 6 HOH B 134 2134 2134 HOH HOH . 
P 6 HOH B 135 2135 2135 HOH HOH . 
P 6 HOH B 136 2136 2136 HOH HOH . 
P 6 HOH B 137 2137 2137 HOH HOH . 
P 6 HOH B 138 2138 2138 HOH HOH . 
P 6 HOH B 139 2139 2139 HOH HOH . 
P 6 HOH B 140 2140 2140 HOH HOH . 
P 6 HOH B 141 2141 2141 HOH HOH . 
P 6 HOH B 142 2142 2142 HOH HOH . 
P 6 HOH B 143 2143 2143 HOH HOH . 
P 6 HOH B 144 2144 2144 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PB GDP . . . L 4 43.713 65.424 0.601 1 21.12 ? PB GDP 1299 B 1 
HETATM 2 O O1B GDP . . . L 4 45.192 65.309 0.687 1 18.75 ? O1B GDP 1299 B 1 
HETATM 3 O O2B GDP . . . L 4 43.101 65.294 -0.92 1 21.92 ? O2B GDP 1299 B 1 
HETATM 4 O O3B GDP . . . L 4 43.282 66.746 1.491 1 25.98 ? O3B GDP 1299 B 1 
HETATM 5 O O3A GDP . . . L 4 43.137 64.176 1.463 1 24.04 ? O3A GDP 1299 B 1 
HETATM 6 P PA GDP . . . L 4 43.98 63.33 2.544 1 22.15 ? PA GDP 1299 B 1 
HETATM 7 O O1A GDP . . . L 4 44.603 64.181 3.639 1 22.49 ? O1A GDP 1299 B 1 
HETATM 8 O O2A GDP . . . L 4 45.138 62.375 1.865 1 20.89 ? O2A GDP 1299 B 1 
HETATM 9 O O5' GDP . . . L 4 42.859 62.3 3.121 1 25.18 ? O5' GDP 1299 B 1 
HETATM 10 C C5' GDP . . . L 4 41.611 62.75 3.623 1 24.06 ? C5' GDP 1299 B 1 
HETATM 11 C C4' GDP . . . L 4 41.11 61.863 4.728 1 22.68 ? C4' GDP 1299 B 1 
HETATM 12 O O4' GDP . . . L 4 40.646 60.66 4.165 1 23.24 ? O4' GDP 1299 B 1 
HETATM 13 C C3' GDP . . . L 4 42.168 61.426 5.73 1 23.37 ? C3' GDP 1299 B 1 
HETATM 14 O O3' GDP . . . L 4 41.456 61.247 6.971 1 24.4 ? O3' GDP 1299 B 1 
HETATM 15 C C2' GDP . . . L 4 42.666 60.069 5.235 1 22.01 ? C2' GDP 1299 B 1 
HETATM 16 O O2' GDP . . . L 4 42.992 59.14 6.252 1 23.13 ? O2' GDP 1299 B 1 
HETATM 17 C C1' GDP . . . L 4 41.43 59.525 4.615 1 21.49 ? C1' GDP 1299 B 1 
HETATM 18 N N9 GDP . . . L 4 41.538 58.619 3.447 1 20.43 ? N9 GDP 1299 B 1 
HETATM 19 C C8 GDP . . . L 4 42.134 58.822 2.255 1 20.48 ? C8 GDP 1299 B 1 
HETATM 20 N N7 GDP . . . L 4 41.913 57.759 1.448 1 18.36 ? N7 GDP 1299 B 1 
HETATM 21 C C5 GDP . . . L 4 41.154 56.889 2.12 1 16.95 ? C5 GDP 1299 B 1 
HETATM 22 C C6 GDP . . . L 4 40.51 55.576 1.878 1 17.26 ? C6 GDP 1299 B 1 
HETATM 23 O O6 GDP . . . L 4 40.637 54.997 0.768 1 14.74 ? O6 GDP 1299 B 1 
HETATM 24 N N1 GDP . . . L 4 39.795 55.031 2.899 1 16.41 ? N1 GDP 1299 B 1 
HETATM 25 C C2 GDP . . . L 4 39.629 55.642 4.083 1 16.04 ? C2 GDP 1299 B 1 
HETATM 26 N N2 GDP . . . L 4 38.886 55.099 5.064 1 18.82 ? N2 GDP 1299 B 1 
HETATM 27 N N3 GDP . . . L 4 40.154 56.82 4.362 1 15.78 ? N3 GDP 1299 B 1 
HETATM 28 C C4 GDP . . . L 4 40.884 57.474 3.429 1 18.59 ? C4 GDP 1299 B 1 
#
_model_server_stats.io_time_ms              15 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    11 
_model_server_stats.query_time_ms           326 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           28 
#