data_1O95 # _model_server_result.job_id qDrE42R56mZ8QCdABURVag _model_server_result.datetime_utc '2024-11-25 15:09:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1o95 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":1732}' # _entry.id 1O95 # _exptl.entry_id 1O95 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 351.64 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'IRON/SULFUR CLUSTER' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 95.35 _cell.angle_gamma 90 _cell.entry_id 1O95 _cell.length_a 102.5 _cell.length_b 116.513 _cell.length_c 138.706 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1O95 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 I N N ? 6 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 30 A CYS 30 1_555 G C6 FMN . A FMN 1730 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.835 ? covale ? covale2 B SG CYS 30 B CYS 30 1_555 J C6 FMN . B FMN 1730 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.857 ? metalc ? metalc1 A SG CYS 345 A CYS 345 1_555 I FE1 SF4 . A SF4 1732 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.004 ? metalc ? metalc2 A SG CYS 348 A CYS 348 1_555 I FE4 SF4 . A SF4 1732 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.726 ? metalc ? metalc3 A SG CYS 351 A CYS 351 1_555 I FE2 SF4 . A SF4 1732 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.504 ? metalc ? metalc4 A SG CYS 364 A CYS 364 1_555 I FE3 SF4 . A SF4 1732 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.079 ? metalc ? metalc5 B SG CYS 345 B CYS 345 1_555 L FE3 SF4 . B SF4 1732 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.118 ? metalc ? metalc6 B SG CYS 348 B CYS 348 1_555 L FE1 SF4 . B SF4 1732 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.936 ? metalc ? metalc7 B SG CYS 351 B CYS 351 1_555 L FE2 SF4 . B SF4 1732 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.209 ? metalc ? metalc8 B SG CYS 364 B CYS 364 1_555 L FE4 SF4 . B SF4 1732 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.173 ? # _chem_comp.formula 'Fe4 S4' _chem_comp.formula_weight 351.64 _chem_comp.id SF4 _chem_comp.mon_nstd_flag . _chem_comp.name 'IRON/SULFUR CLUSTER' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag FE1 S2 SF4 sing 425 n n FE1 S3 SF4 sing 426 n n FE1 S4 SF4 sing 427 n n FE2 S1 SF4 sing 428 n n FE2 S3 SF4 sing 429 n n FE2 S4 SF4 sing 430 n n FE3 S1 SF4 sing 431 n n FE3 S2 SF4 sing 432 n n FE3 S4 SF4 sing 433 n n FE4 S1 SF4 sing 434 n n FE4 S2 SF4 sing 435 n n FE4 S3 SF4 sing 436 n n # _atom_sites.entry_id 1O95 _atom_sites.fract_transf_matrix[1][1] 0.009756 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000914 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008583 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007241 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 4 FMN A 1 1730 1730 FMN FMN . H 5 ADP A 1 1731 1731 ADP ADP . I 6 SF4 A 1 1732 1732 SF4 SF4 . J 4 FMN B 1 1730 1730 FMN FMN . K 5 ADP B 1 1731 1731 ADP ADP . L 6 SF4 B 1 1732 1732 SF4 SF4 . M 7 AMP C 1 1236 1236 AMP AMP . N 7 AMP E 1 1237 1237 AMP AMP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 FE FE1 SF4 . . . I 6 56.31 0.506 45.791 1 38.05 ? FE1 SF4 1732 A 1 HETATM 2 FE FE2 SF4 . . . I 6 54.142 0.697 44.836 1 31.96 ? FE2 SF4 1732 A 1 HETATM 3 FE FE3 SF4 . . . I 6 54.442 1.652 46.891 1 40.03 ? FE3 SF4 1732 A 1 HETATM 4 FE FE4 SF4 . . . I 6 54.401 -0.971 46.702 1 36.86 ? FE4 SF4 1732 A 1 HETATM 5 S S1 SF4 . . . I 6 52.64 0.376 46.453 1 39.44 ? S1 SF4 1732 A 1 HETATM 6 S S2 SF4 . . . I 6 55.848 0.118 47.965 1 33.22 ? S2 SF4 1732 A 1 HETATM 7 S S3 SF4 . . . I 6 55.365 -1.218 44.691 1 41.8 ? S3 SF4 1732 A 1 HETATM 8 S S4 SF4 . . . I 6 55.459 2.517 45.076 1 33.45 ? S4 SF4 1732 A 1 # _model_server_stats.io_time_ms 26 _model_server_stats.parse_time_ms 66 _model_server_stats.create_model_time_ms 118 _model_server_stats.query_time_ms 386 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 8 #