data_1O96
#
_model_server_result.job_id            8CYSsyFgmVSz6pACngebHQ 
_model_server_result.datetime_utc      '2024-11-22 10:00:01' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1o96 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":1263}' 
#
_entry.id    1O96 
#
_exptl.entry_id    1O96 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              347.221 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ADENOSINE MONOPHOSPHATE' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1O96 
_cell.length_a            117.516 
_cell.length_b            126.877 
_cell.length_c            221.39 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1O96 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PQS dimeric 2 author_and_software_defined_assembly 1 
PQS dimeric 2 author_and_software_defined_assembly 2 
PQS dimeric 2 author_and_software_defined_assembly 3 
PQS dimeric 2 author_and_software_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,I,J 1 1 
C,D,K,L 2 1 
E,F,M,N 3 1 
G,H,O,P 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 I N N 
? 3 K N N 
? 3 M N N 
? 3 O N N 
#
_chem_comp.formula           'C10 H14 N5 O7 P' 
_chem_comp.formula_weight    347.221 
_chem_comp.id                AMP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ADENOSINE MONOPHOSPHATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
P O1P AMP doub 13 n n 
P O2P AMP sing 14 n n 
P O3P AMP sing 15 n n 
P O5' AMP sing 16 n n 
O2P HOP2 AMP sing 17 n n 
O3P HOP3 AMP sing 18 n n 
O5' C5' AMP sing 19 n n 
C5' C4' AMP sing 20 n n 
C5' "H5'1" AMP sing 21 n n 
C5' "H5'2" AMP sing 22 n n 
C4' O4' AMP sing 23 n n 
C4' C3' AMP sing 24 n n 
C4' H4' AMP sing 25 n n 
O4' C1' AMP sing 26 n n 
C3' O3' AMP sing 27 n n 
C3' C2' AMP sing 28 n n 
C3' H3' AMP sing 29 n n 
O3' HO3' AMP sing 30 n n 
C2' O2' AMP sing 31 n n 
C2' C1' AMP sing 32 n n 
C2' H2' AMP sing 33 n n 
O2' HO2' AMP sing 34 n n 
C1' N9 AMP sing 35 n n 
C1' H1' AMP sing 36 n n 
N9 C8 AMP sing 37 n y 
N9 C4 AMP sing 38 n y 
C8 N7 AMP doub 39 n y 
C8 H8 AMP sing 40 n n 
N7 C5 AMP sing 41 n y 
C5 C6 AMP sing 42 n y 
C5 C4 AMP doub 43 n y 
C6 N6 AMP sing 44 n n 
C6 N1 AMP doub 45 n y 
N6 HN61 AMP sing 46 n n 
N6 HN62 AMP sing 47 n n 
N1 C2 AMP sing 48 n y 
C2 N3 AMP doub 49 n y 
C2 H2 AMP sing 50 n n 
N3 C4 AMP sing 51 n y 
#
_atom_sites.entry_id                     1O96 
_atom_sites.fract_transf_matrix[1][1]    0.008509 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007882 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004517 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
I 3 AMP A 1 1263 1263 AMP AMP . 
J 4 FAD B 1 1319 1319 FAD FAD . 
K 3 AMP C 1 1262 1262 AMP AMP . 
L 4 FAD D 1 1319 1319 FAD FAD . 
M 3 AMP E 1 1262 1262 AMP AMP . 
N 4 FAD F 1 1319 1319 FAD FAD . 
O 3 AMP Q 1 1262 1262 AMP AMP . 
P 4 FAD Z 1 1319 1319 FAD FAD . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P P AMP . . . I 3 23.368 24.892 81.12 1 36.76 ? P AMP 1263 A 1 
HETATM 2 O O1P AMP . . . I 3 23.569 23.278 81.219 1 37.14 ? O1P AMP 1263 A 1 
HETATM 3 O O2P AMP . . . I 3 22.681 25.255 79.844 1 32.58 ? O2P AMP 1263 A 1 
HETATM 4 O O3P AMP . . . I 3 24.652 25.743 81.276 1 27.63 ? O3P AMP 1263 A 1 
HETATM 5 O O5' AMP . . . I 3 22.605 25.275 82.487 1 33.19 ? O5' AMP 1263 A 1 
HETATM 6 C C5' AMP . . . I 3 21.337 25.828 82.518 1 34.99 ? C5' AMP 1263 A 1 
HETATM 7 C C4' AMP . . . I 3 20.066 24.999 82.826 1 32.13 ? C4' AMP 1263 A 1 
HETATM 8 O O4' AMP . . . I 3 19.89 23.885 81.999 1 32.95 ? O4' AMP 1263 A 1 
HETATM 9 C C3' AMP . . . I 3 19.723 24.482 84.202 1 27.64 ? C3' AMP 1263 A 1 
HETATM 10 O O3' AMP . . . I 3 19.304 25.466 85.099 1 23.33 ? O3' AMP 1263 A 1 
HETATM 11 C C2' AMP . . . I 3 18.492 23.684 83.821 1 27.26 ? C2' AMP 1263 A 1 
HETATM 12 O O2' AMP . . . I 3 17.443 24.567 83.673 1 26.4 ? O2' AMP 1263 A 1 
HETATM 13 C C1' AMP . . . I 3 18.76 23.211 82.441 1 27.75 ? C1' AMP 1263 A 1 
HETATM 14 N N9 AMP . . . I 3 19.398 21.931 82.414 1 29.15 ? N9 AMP 1263 A 1 
HETATM 15 C C8 AMP . . . I 3 20.645 21.692 81.905 1 27.19 ? C8 AMP 1263 A 1 
HETATM 16 N N7 AMP . . . I 3 20.827 20.374 82.037 1 28.43 ? N7 AMP 1263 A 1 
HETATM 17 C C5 AMP . . . I 3 19.762 19.785 82.583 1 28.75 ? C5 AMP 1263 A 1 
HETATM 18 C C6 AMP . . . I 3 19.453 18.464 82.824 1 28.39 ? C6 AMP 1263 A 1 
HETATM 19 N N6 AMP . . . I 3 20.393 17.571 82.585 1 27.52 ? N6 AMP 1263 A 1 
HETATM 20 N N1 AMP . . . I 3 18.223 18.107 83.325 1 29.33 ? N1 AMP 1263 A 1 
HETATM 21 C C2 AMP . . . I 3 17.33 19.139 83.561 1 33.54 ? C2 AMP 1263 A 1 
HETATM 22 N N3 AMP . . . I 3 17.589 20.489 83.285 1 32.6 ? N3 AMP 1263 A 1 
HETATM 23 C C4 AMP . . . I 3 18.824 20.777 82.805 1 31.17 ? C4 AMP 1263 A 1 
#
_model_server_stats.io_time_ms              62 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    36 
_model_server_stats.query_time_ms           289 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           23 
#