data_1OBV
#
_model_server_result.job_id            eEpwRwpeE-FdnvuA2NFQqA 
_model_server_result.datetime_utc      '2024-10-14 08:20:25' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1obv 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":1170}' 
#
_entry.id    1OBV 
#
_exptl.entry_id    1OBV 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              456.344 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN MONONUCLEOTIDE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1OBV 
_cell.length_a            44.086 
_cell.length_b            57.146 
_cell.length_c            58.93 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1OBV 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PQS 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C17 H21 N4 O9 P' 
_chem_comp.formula_weight    456.344 
_chem_comp.id                FMN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN MONONUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'RIBOFLAVIN MONOPHOSPHATE' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C2 FMN sing 83 n n 
N1 C10 FMN doub 84 n n 
C2 O2 FMN doub 85 n n 
C2 N3 FMN sing 86 n n 
N3 C4 FMN sing 87 n n 
N3 HN3 FMN sing 88 n n 
C4 O4 FMN doub 89 n n 
C4 C4A FMN sing 90 n n 
C4A N5 FMN doub 91 n n 
C4A C10 FMN sing 92 n n 
N5 C5A FMN sing 93 n n 
C5A C6 FMN doub 94 n y 
C5A C9A FMN sing 95 n y 
C6 C7 FMN sing 96 n y 
C6 H6 FMN sing 97 n n 
C7 C7M FMN sing 98 n n 
C7 C8 FMN doub 99 n y 
C7M HM71 FMN sing 100 n n 
C7M HM72 FMN sing 101 n n 
C7M HM73 FMN sing 102 n n 
C8 C8M FMN sing 103 n n 
C8 C9 FMN sing 104 n y 
C8M HM81 FMN sing 105 n n 
C8M HM82 FMN sing 106 n n 
C8M HM83 FMN sing 107 n n 
C9 C9A FMN doub 108 n y 
C9 H9 FMN sing 109 n n 
C9A N10 FMN sing 110 n n 
N10 C10 FMN sing 111 n n 
N10 C1' FMN sing 112 n n 
C1' C2' FMN sing 113 n n 
C1' "H1'1" FMN sing 114 n n 
C1' "H1'2" FMN sing 115 n n 
C2' O2' FMN sing 116 n n 
C2' C3' FMN sing 117 n n 
C2' H2' FMN sing 118 n n 
O2' HO2' FMN sing 119 n n 
C3' O3' FMN sing 120 n n 
C3' C4' FMN sing 121 n n 
C3' H3' FMN sing 122 n n 
O3' HO3' FMN sing 123 n n 
C4' O4' FMN sing 124 n n 
C4' C5' FMN sing 125 n n 
C4' H4' FMN sing 126 n n 
O4' HO4' FMN sing 127 n n 
C5' O5' FMN sing 128 n n 
C5' "H5'1" FMN sing 129 n n 
C5' "H5'2" FMN sing 130 n n 
O5' P FMN sing 131 n n 
P O1P FMN doub 132 n n 
P O2P FMN sing 133 n n 
P O3P FMN sing 134 n n 
O2P HOP2 FMN sing 135 n n 
O3P HOP3 FMN sing 136 n n 
#
_atom_sites.entry_id                     1OBV 
_atom_sites.fract_transf_matrix[1][1]    0.022683 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.017499 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.016969 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 FMN A 1 1170 1170 FMN FMN . 
C 3 SO4 A 1 1171 1171 SO4 SO4 . 
D 3 SO4 A 1 1172 1172 SO4 SO4 . 
E 3 SO4 A 1 1173 1173 SO4 SO4 . 
F 4 HOH A 1 2001 2001 HOH HOH . 
F 4 HOH A 2 2002 2002 HOH HOH . 
F 4 HOH A 3 2003 2003 HOH HOH . 
F 4 HOH A 4 2004 2004 HOH HOH . 
F 4 HOH A 5 2005 2005 HOH HOH . 
F 4 HOH A 6 2006 2006 HOH HOH . 
F 4 HOH A 7 2007 2007 HOH HOH . 
F 4 HOH A 8 2008 2008 HOH HOH . 
F 4 HOH A 9 2009 2009 HOH HOH . 
F 4 HOH A 10 2010 2010 HOH HOH . 
F 4 HOH A 11 2011 2011 HOH HOH . 
F 4 HOH A 12 2012 2012 HOH HOH . 
F 4 HOH A 13 2013 2013 HOH HOH . 
F 4 HOH A 14 2014 2014 HOH HOH . 
F 4 HOH A 15 2015 2015 HOH HOH . 
F 4 HOH A 16 2016 2016 HOH HOH . 
F 4 HOH A 17 2017 2017 HOH HOH . 
F 4 HOH A 18 2018 2018 HOH HOH . 
F 4 HOH A 19 2019 2019 HOH HOH . 
F 4 HOH A 20 2020 2020 HOH HOH . 
F 4 HOH A 21 2021 2021 HOH HOH . 
F 4 HOH A 22 2022 2022 HOH HOH . 
F 4 HOH A 23 2023 2023 HOH HOH . 
F 4 HOH A 24 2024 2024 HOH HOH . 
F 4 HOH A 25 2025 2025 HOH HOH . 
F 4 HOH A 26 2026 2026 HOH HOH . 
F 4 HOH A 27 2027 2027 HOH HOH . 
F 4 HOH A 28 2028 2028 HOH HOH . 
F 4 HOH A 29 2029 2029 HOH HOH . 
F 4 HOH A 30 2030 2030 HOH HOH . 
F 4 HOH A 31 2031 2031 HOH HOH . 
F 4 HOH A 32 2032 2032 HOH HOH . 
F 4 HOH A 33 2033 2033 HOH HOH . 
F 4 HOH A 34 2034 2034 HOH HOH . 
F 4 HOH A 35 2035 2035 HOH HOH . 
F 4 HOH A 36 2036 2036 HOH HOH . 
F 4 HOH A 37 2037 2037 HOH HOH . 
F 4 HOH A 38 2038 2038 HOH HOH . 
F 4 HOH A 39 2039 2039 HOH HOH . 
F 4 HOH A 40 2040 2040 HOH HOH . 
F 4 HOH A 41 2041 2041 HOH HOH . 
F 4 HOH A 42 2042 2042 HOH HOH . 
F 4 HOH A 43 2043 2043 HOH HOH . 
F 4 HOH A 44 2044 2044 HOH HOH . 
F 4 HOH A 45 2045 2045 HOH HOH . 
F 4 HOH A 46 2046 2046 HOH HOH . 
F 4 HOH A 47 2047 2047 HOH HOH . 
F 4 HOH A 48 2048 2048 HOH HOH . 
F 4 HOH A 49 2049 2049 HOH HOH . 
F 4 HOH A 50 2050 2050 HOH HOH . 
F 4 HOH A 51 2051 2051 HOH HOH . 
F 4 HOH A 52 2052 2052 HOH HOH . 
F 4 HOH A 53 2053 2053 HOH HOH . 
F 4 HOH A 54 2054 2054 HOH HOH . 
F 4 HOH A 55 2055 2055 HOH HOH . 
F 4 HOH A 56 2056 2056 HOH HOH . 
F 4 HOH A 57 2057 2057 HOH HOH . 
F 4 HOH A 58 2058 2058 HOH HOH . 
F 4 HOH A 59 2059 2059 HOH HOH . 
F 4 HOH A 60 2060 2060 HOH HOH . 
F 4 HOH A 61 2061 2061 HOH HOH . 
F 4 HOH A 62 2062 2062 HOH HOH . 
F 4 HOH A 63 2063 2063 HOH HOH . 
F 4 HOH A 64 2064 2064 HOH HOH . 
F 4 HOH A 65 2065 2065 HOH HOH . 
F 4 HOH A 66 2066 2066 HOH HOH . 
F 4 HOH A 67 2067 2067 HOH HOH . 
F 4 HOH A 68 2068 2068 HOH HOH . 
F 4 HOH A 69 2069 2069 HOH HOH . 
F 4 HOH A 70 2070 2070 HOH HOH . 
F 4 HOH A 71 2071 2071 HOH HOH . 
F 4 HOH A 72 2072 2072 HOH HOH . 
F 4 HOH A 73 2073 2073 HOH HOH . 
F 4 HOH A 74 2074 2074 HOH HOH . 
F 4 HOH A 75 2075 2075 HOH HOH . 
F 4 HOH A 76 2076 2076 HOH HOH . 
F 4 HOH A 77 2077 2077 HOH HOH . 
F 4 HOH A 78 2078 2078 HOH HOH . 
F 4 HOH A 79 2079 2079 HOH HOH . 
F 4 HOH A 80 2080 2080 HOH HOH . 
F 4 HOH A 81 2081 2081 HOH HOH . 
F 4 HOH A 82 2082 2082 HOH HOH . 
F 4 HOH A 83 2083 2083 HOH HOH . 
F 4 HOH A 84 2084 2084 HOH HOH . 
F 4 HOH A 85 2085 2085 HOH HOH . 
F 4 HOH A 86 2086 2086 HOH HOH . 
F 4 HOH A 87 2087 2087 HOH HOH . 
F 4 HOH A 88 2088 2088 HOH HOH . 
F 4 HOH A 89 2089 2089 HOH HOH . 
F 4 HOH A 90 2090 2090 HOH HOH . 
F 4 HOH A 91 2091 2091 HOH HOH . 
F 4 HOH A 92 2092 2092 HOH HOH . 
F 4 HOH A 93 2093 2093 HOH HOH . 
F 4 HOH A 94 2094 2094 HOH HOH . 
F 4 HOH A 95 2095 2095 HOH HOH . 
F 4 HOH A 96 2096 2096 HOH HOH . 
F 4 HOH A 97 2097 2097 HOH HOH . 
F 4 HOH A 98 2098 2098 HOH HOH . 
F 4 HOH A 99 2099 2099 HOH HOH . 
F 4 HOH A 100 2100 2100 HOH HOH . 
F 4 HOH A 101 2101 2101 HOH HOH . 
F 4 HOH A 102 2102 2102 HOH HOH . 
F 4 HOH A 103 2103 2103 HOH HOH . 
F 4 HOH A 104 2104 2104 HOH HOH . 
F 4 HOH A 105 2105 2105 HOH HOH . 
F 4 HOH A 106 2106 2106 HOH HOH . 
F 4 HOH A 107 2107 2107 HOH HOH . 
F 4 HOH A 108 2108 2108 HOH HOH . 
F 4 HOH A 109 2109 2109 HOH HOH . 
F 4 HOH A 110 2110 2110 HOH HOH . 
F 4 HOH A 111 2111 2111 HOH HOH . 
F 4 HOH A 112 2112 2112 HOH HOH . 
F 4 HOH A 113 2113 2113 HOH HOH . 
F 4 HOH A 114 2114 2114 HOH HOH . 
F 4 HOH A 115 2115 2115 HOH HOH . 
F 4 HOH A 116 2116 2116 HOH HOH . 
F 4 HOH A 117 2117 2117 HOH HOH . 
F 4 HOH A 118 2118 2118 HOH HOH . 
F 4 HOH A 119 2119 2119 HOH HOH . 
F 4 HOH A 120 2120 2120 HOH HOH . 
F 4 HOH A 121 2121 2121 HOH HOH . 
F 4 HOH A 122 2122 2122 HOH HOH . 
F 4 HOH A 123 2123 2123 HOH HOH . 
F 4 HOH A 124 2124 2124 HOH HOH . 
F 4 HOH A 125 2125 2125 HOH HOH . 
F 4 HOH A 126 2126 2126 HOH HOH . 
F 4 HOH A 127 2127 2127 HOH HOH . 
F 4 HOH A 128 2128 2128 HOH HOH . 
F 4 HOH A 129 2129 2129 HOH HOH . 
F 4 HOH A 130 2130 2130 HOH HOH . 
F 4 HOH A 131 2131 2131 HOH HOH . 
F 4 HOH A 132 2132 2132 HOH HOH . 
F 4 HOH A 133 2133 2133 HOH HOH . 
F 4 HOH A 134 2134 2134 HOH HOH . 
F 4 HOH A 135 2135 2135 HOH HOH . 
F 4 HOH A 136 2136 2136 HOH HOH . 
F 4 HOH A 137 2137 2137 HOH HOH . 
F 4 HOH A 138 2138 2138 HOH HOH . 
F 4 HOH A 139 2139 2139 HOH HOH . 
F 4 HOH A 140 2140 2140 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 FMN . . . B 2 2.08 10.348 9.075 1 9.06 ? N1 FMN 1170 A 1 
HETATM 2 C C2 FMN . . . B 2 1.267 11.397 9.423 1 8.18 ? C2 FMN 1170 A 1 
HETATM 3 O O2 FMN . . . B 2 1.562 12.573 9.227 1 8.57 ? O2 FMN 1170 A 1 
HETATM 4 N N3 FMN . . . B 2 0.055 11.041 10.033 1 8.11 ? N3 FMN 1170 A 1 
HETATM 5 C C4 FMN . . . B 2 -0.414 9.72 10.327 1 8.36 ? C4 FMN 1170 A 1 
HETATM 6 O O4 FMN . . . B 2 -1.509 9.559 10.869 1 9.75 ? O4 FMN 1170 A 1 
HETATM 7 C C4A FMN . . . B 2 0.469 8.687 9.942 1 10.29 ? C4A FMN 1170 A 1 
HETATM 8 N N5 FMN . . . B 2 0.258 7.325 10.096 1 7.14 ? N5 FMN 1170 A 1 
HETATM 9 C C5A FMN . . . B 2 1.023 6.216 9.743 1 10.01 ? C5A FMN 1170 A 1 
HETATM 10 C C6 FMN . . . B 2 0.559 4.837 9.996 1 11.05 ? C6 FMN 1170 A 1 
HETATM 11 C C7 FMN . . . B 2 1.406 3.715 9.572 1 14.55 ? C7 FMN 1170 A 1 
HETATM 12 C C7M FMN . . . B 2 0.877 2.292 9.83 1 14.14 ? C7M FMN 1170 A 1 
HETATM 13 C C8 FMN . . . B 2 2.695 4.008 8.916 1 11.69 ? C8 FMN 1170 A 1 
HETATM 14 C C8M FMN . . . B 2 3.702 2.93 8.377 1 12.89 ? C8M FMN 1170 A 1 
HETATM 15 C C9 FMN . . . B 2 3.079 5.395 8.733 1 9.46 ? C9 FMN 1170 A 1 
HETATM 16 C C9A FMN . . . B 2 2.231 6.503 9.131 1 10.32 ? C9A FMN 1170 A 1 
HETATM 17 N N10 FMN . . . B 2 2.52 7.888 8.969 1 10.06 ? N10 FMN 1170 A 1 
HETATM 18 C C10 FMN . . . B 2 1.705 9.035 9.318 1 10.07 ? C10 FMN 1170 A 1 
HETATM 19 C C1' FMN . . . B 2 3.863 8.192 8.316 1 9.32 ? C1' FMN 1170 A 1 
HETATM 20 C C2' FMN . . . B 2 5.028 8.412 9.306 1 11.22 ? C2' FMN 1170 A 1 
HETATM 21 O O2' FMN . . . B 2 4.794 9.567 10.117 1 11.82 ? O2' FMN 1170 A 1 
HETATM 22 C C3' FMN . . . B 2 6.335 8.643 8.523 1 11.55 ? C3' FMN 1170 A 1 
HETATM 23 O O3' FMN . . . B 2 6.683 7.521 7.719 1 8.97 ? O3' FMN 1170 A 1 
HETATM 24 C C4' FMN . . . B 2 7.501 9.132 9.458 1 11.64 ? C4' FMN 1170 A 1 
HETATM 25 O O4' FMN . . . B 2 8.624 9.549 8.691 1 12.8 ? O4' FMN 1170 A 1 
HETATM 26 C C5' FMN . . . B 2 8.061 8.08 10.395 1 8.58 ? C5' FMN 1170 A 1 
HETATM 27 O O5' FMN . . . B 2 9.042 8.681 11.227 1 7.89 ? O5' FMN 1170 A 1 
HETATM 28 P P FMN . . . B 2 9.897 7.926 12.322 1 7.18 ? P FMN 1170 A 1 
HETATM 29 O O1P FMN . . . B 2 8.92 7.233 13.19 1 8.39 ? O1P FMN 1170 A 1 
HETATM 30 O O2P FMN . . . B 2 10.744 6.995 11.573 1 8.31 ? O2P FMN 1170 A 1 
HETATM 31 O O3P FMN . . . B 2 10.692 9.017 12.927 1 9.11 ? O3P FMN 1170 A 1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           323 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           31 
#