data_1OC3 # _model_server_result.job_id LyTiVgaoe5LDD2l8MN_8wQ _model_server_result.datetime_utc '2024-10-19 10:25:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1oc3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":201}' # _entry.id 1OC3 # _exptl.entry_id 1OC3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 122.121 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'BENZOIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1OC3 _cell.length_a 79.195 _cell.length_b 102.053 _cell.length_c 145.06 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1OC3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PQS monomeric 1 author_and_software_defined_assembly 1 PQS monomeric 1 author_and_software_defined_assembly 2 PQS monomeric 1 author_and_software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,F 1 1 B,E,G 2 1 C,H 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 E N N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id C _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 58 _struct_conn.ptnr1_auth_asym_id C _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 47 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id C _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 162 _struct_conn.ptnr2_auth_asym_id C _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 151 _struct_conn.ptnr2_symmetry 4_556 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.427 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C7 H6 O2' _chem_comp.formula_weight 122.121 _chem_comp.id BEZ _chem_comp.mon_nstd_flag . _chem_comp.name 'BENZOIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O1 BEZ doub 70 n n C O2 BEZ sing 71 n n C C1 BEZ sing 72 n n O2 HO2 BEZ sing 73 n n C1 C2 BEZ doub 74 n y C1 C6 BEZ sing 75 n y C2 C3 BEZ sing 76 n y C2 H2 BEZ sing 77 n n C3 C4 BEZ doub 78 n y C3 H3 BEZ sing 79 n n C4 C5 BEZ sing 80 n y C4 H4 BEZ sing 81 n n C5 C6 BEZ doub 82 n y C5 H5 BEZ sing 83 n n C6 H6 BEZ sing 84 n n # _atom_sites.entry_id 1OC3 _atom_sites.fract_transf_matrix[1][1] 0.012627 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009799 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006894 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 BEZ A 1 201 201 BEZ BEZ . E 2 BEZ B 1 201 201 BEZ BEZ . F 3 HOH A 1 2001 2001 HOH HOH . F 3 HOH A 2 2002 2002 HOH HOH . F 3 HOH A 3 2003 2003 HOH HOH . F 3 HOH A 4 2004 2004 HOH HOH . F 3 HOH A 5 2005 2005 HOH HOH . F 3 HOH A 6 2006 2006 HOH HOH . F 3 HOH A 7 2007 2007 HOH HOH . F 3 HOH A 8 2008 2008 HOH HOH . F 3 HOH A 9 2009 2009 HOH HOH . F 3 HOH A 10 2010 2010 HOH HOH . F 3 HOH A 11 2011 2011 HOH HOH . F 3 HOH A 12 2012 2012 HOH HOH . F 3 HOH A 13 2013 2013 HOH HOH . F 3 HOH A 14 2014 2014 HOH HOH . F 3 HOH A 15 2015 2015 HOH HOH . F 3 HOH A 16 2016 2016 HOH HOH . F 3 HOH A 17 2017 2017 HOH HOH . F 3 HOH A 18 2018 2018 HOH HOH . F 3 HOH A 19 2019 2019 HOH HOH . F 3 HOH A 20 2020 2020 HOH HOH . F 3 HOH A 21 2021 2021 HOH HOH . F 3 HOH A 22 2022 2022 HOH HOH . G 3 HOH B 1 2001 2001 HOH HOH . G 3 HOH B 2 2002 2002 HOH HOH . G 3 HOH B 3 2003 2003 HOH HOH . G 3 HOH B 4 2004 2004 HOH HOH . G 3 HOH B 5 2005 2005 HOH HOH . G 3 HOH B 6 2006 2006 HOH HOH . G 3 HOH B 7 2007 2007 HOH HOH . G 3 HOH B 8 2008 2008 HOH HOH . G 3 HOH B 9 2009 2009 HOH HOH . G 3 HOH B 10 2010 2010 HOH HOH . G 3 HOH B 11 2011 2011 HOH HOH . G 3 HOH B 12 2012 2012 HOH HOH . G 3 HOH B 13 2013 2013 HOH HOH . G 3 HOH B 14 2014 2014 HOH HOH . G 3 HOH B 15 2015 2015 HOH HOH . G 3 HOH B 16 2016 2016 HOH HOH . G 3 HOH B 17 2017 2017 HOH HOH . G 3 HOH B 18 2018 2018 HOH HOH . G 3 HOH B 19 2019 2019 HOH HOH . G 3 HOH B 20 2020 2020 HOH HOH . G 3 HOH B 21 2021 2021 HOH HOH . G 3 HOH B 22 2022 2022 HOH HOH . H 3 HOH C 1 2001 2001 HOH HOH . H 3 HOH C 2 2002 2002 HOH HOH . H 3 HOH C 3 2003 2003 HOH HOH . H 3 HOH C 4 2004 2004 HOH HOH . H 3 HOH C 5 2005 2005 HOH HOH . H 3 HOH C 6 2006 2006 HOH HOH . H 3 HOH C 7 2007 2007 HOH HOH . H 3 HOH C 8 2008 2008 HOH HOH . H 3 HOH C 9 2009 2009 HOH HOH . H 3 HOH C 10 2010 2010 HOH HOH . H 3 HOH C 11 2011 2011 HOH HOH . H 3 HOH C 12 2012 2012 HOH HOH . H 3 HOH C 13 2013 2013 HOH HOH . H 3 HOH C 14 2014 2014 HOH HOH . H 3 HOH C 15 2015 2015 HOH HOH . H 3 HOH C 16 2016 2016 HOH HOH . H 3 HOH C 17 2017 2017 HOH HOH . H 3 HOH C 18 2018 2018 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C BEZ . . . D 2 12.463 9.197 40.506 1 34.93 ? C BEZ 201 A 1 HETATM 2 O O1 BEZ . . . D 2 12.221 9.602 39.169 1 34.94 ? O1 BEZ 201 A 1 HETATM 3 O O2 BEZ . . . D 2 12.811 10.035 41.484 1 33.81 ? O2 BEZ 201 A 1 HETATM 4 C C1 BEZ . . . D 2 12.302 7.77 40.815 1 34.94 ? C1 BEZ 201 A 1 HETATM 5 C C2 BEZ . . . D 2 12.062 7.377 42.138 1 35.95 ? C2 BEZ 201 A 1 HETATM 6 C C3 BEZ . . . D 2 11.888 6.03 42.413 1 29.4 ? C3 BEZ 201 A 1 HETATM 7 C C4 BEZ . . . D 2 12.029 5.111 41.418 1 30.54 ? C4 BEZ 201 A 1 HETATM 8 C C5 BEZ . . . D 2 12.259 5.482 40.117 1 26.95 ? C5 BEZ 201 A 1 HETATM 9 C C6 BEZ . . . D 2 12.401 6.82 39.812 1 33.32 ? C6 BEZ 201 A 1 # _model_server_stats.io_time_ms 52 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 9 #