data_1OG0 # _model_server_result.job_id oOGiqnF_41_n7kejFPxzGA _model_server_result.datetime_utc '2024-10-19 05:28:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1og0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"Q","auth_seq_id":1012}' # _entry.id 1OG0 # _exptl.entry_id 1OG0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 165.189 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description PHENYLALANINE _entity.pdbx_number_of_molecules 7 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 65.39 _cell.angle_beta 85.77 _cell.angle_gamma 75.52 _cell.entry_id 1OG0 _cell.length_a 82.154 _cell.length_b 93.971 _cell.length_c 104.843 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1OG0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PQS dimeric 2 author_and_software_defined_assembly 1 PQS dimeric 2 author_and_software_defined_assembly 2 PQS dimeric 2 author_and_software_defined_assembly 3 PQS dimeric 2 author_and_software_defined_assembly 4 PISA tetrameric 4 software_defined_assembly 5 PISA tetrameric 4 software_defined_assembly 6 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,I,J,K,X,Y 1 1 C,D,L,M,N,O,Z,AA 2 1 E,F,P,Q,R,S,BA,CA 3 1 G,H,T,U,V,W,DA,EA 4 1 E,F,G,H,P,Q,R,S,T,U,V,W,BA,CA,DA,EA 5 1 A,B,C,D,I,J,K,L,M,N,O,X,Y,Z,AA 6 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 J N N ? 3 M N N ? 3 O N N ? 3 Q N N ? 3 S N N ? 3 U N N ? 3 W N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 76 A CYS 76 1_555 I MN MN . A MN 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.772 ? metalc ? metalc2 A NE2 HIS 282 A HIS 282 1_555 I MN MN . A MN 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.631 ? metalc ? metalc3 A OE2 GLU 316 A GLU 316 1_555 I MN MN . A MN 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? metalc ? metalc4 A OD2 ASP 342 A ASP 342 1_555 I MN MN . A MN 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.809 ? metalc ? metalc5 B SG CYS 76 B CYS 76 1_555 K MN MN . B MN 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.641 ? metalc ? metalc6 B OE2 GLU 316 B GLU 316 1_555 K MN MN . B MN 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.126 ? metalc ? metalc7 B OD2 ASP 342 B ASP 342 1_555 K MN MN . B MN 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.157 ? metalc ? metalc8 C SG CYS 76 C CYS 76 1_555 L MN MN . C MN 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.515 ? metalc ? metalc9 C NE2 HIS 282 C HIS 282 1_555 L MN MN . C MN 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.433 ? metalc ? metalc10 C OE2 GLU 316 C GLU 316 1_555 L MN MN . C MN 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.346 ? metalc ? metalc11 C OD1 ASP 342 C ASP 342 1_555 L MN MN . C MN 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.647 ? metalc ? metalc12 L MN MN . C MN 400 1_555 Z O HOH . C HOH 2014 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.152 ? metalc ? metalc13 D SG CYS 76 D CYS 76 1_555 N MN MN . D MN 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.503 ? metalc ? metalc14 D NE2 HIS 282 D HIS 282 1_555 N MN MN . D MN 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.526 ? metalc ? metalc15 D OE2 GLU 316 D GLU 316 1_555 N MN MN . D MN 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.213 ? metalc ? metalc16 D OD2 ASP 342 D ASP 342 1_555 N MN MN . D MN 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.163 ? metalc ? metalc17 E SG CYS 76 E CYS 76 1_555 P MN MN . E MN 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.64 ? metalc ? metalc18 E NE2 HIS 282 E HIS 282 1_555 P MN MN . E MN 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.624 ? metalc ? metalc19 E OE2 GLU 316 E GLU 316 1_555 P MN MN . E MN 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? metalc ? metalc20 E OD2 ASP 342 E ASP 342 1_555 P MN MN . E MN 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.211 ? metalc ? metalc21 F SG CYS 76 F CYS 76 1_555 R MN MN . F MN 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.585 ? metalc ? metalc22 F NE2 HIS 282 F HIS 282 1_555 R MN MN . F MN 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.489 ? metalc ? metalc23 F OE2 GLU 316 F GLU 316 1_555 R MN MN . F MN 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.952 ? metalc ? metalc24 F OD2 ASP 342 F ASP 342 1_555 R MN MN . F MN 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.391 ? metalc ? metalc25 G SG CYS 76 G CYS 76 1_555 T MN MN . G MN 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.552 ? metalc ? metalc26 G NE2 HIS 282 G HIS 282 1_555 T MN MN . G MN 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.346 ? metalc ? metalc27 G OE2 GLU 316 G GLU 316 1_555 T MN MN . G MN 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.243 ? metalc ? metalc28 G OD2 ASP 342 G ASP 342 1_555 T MN MN . G MN 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.464 ? metalc ? metalc29 H SG CYS 76 H CYS 76 1_555 V MN MN . H MN 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.511 ? metalc ? metalc30 H NE2 HIS 282 H HIS 282 1_555 V MN MN . H MN 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.326 ? metalc ? metalc31 H OE2 GLU 316 H GLU 316 1_555 V MN MN . H MN 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.175 ? metalc ? metalc32 H OD2 ASP 342 H ASP 342 1_555 V MN MN . H MN 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.261 ? # _chem_comp.formula 'C9 H11 N O2' _chem_comp.formula_weight 165.189 _chem_comp.id PHE _chem_comp.mon_nstd_flag y _chem_comp.name PHENYLALANINE _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA PHE sing 237 n n N H PHE sing 238 n n N H2 PHE sing 239 n n CA C PHE sing 240 n n CA CB PHE sing 241 n n CA HA PHE sing 242 n n C O PHE doub 243 n n C OXT PHE sing 244 n n CB CG PHE sing 245 n n CB HB2 PHE sing 246 n n CB HB3 PHE sing 247 n n CG CD1 PHE doub 248 n y CG CD2 PHE sing 249 n y CD1 CE1 PHE sing 250 n y CD1 HD1 PHE sing 251 n n CD2 CE2 PHE doub 252 n y CD2 HD2 PHE sing 253 n n CE1 CZ PHE doub 254 n y CE1 HE1 PHE sing 255 n n CE2 CZ PHE sing 256 n y CE2 HE2 PHE sing 257 n n CZ HZ PHE sing 258 n n OXT HXT PHE sing 259 n n # _atom_sites.entry_id 1OG0 _atom_sites.fract_transf_matrix[1][1] 0.012172 _atom_sites.fract_transf_matrix[1][2] -0.003143 _atom_sites.fract_transf_matrix[1][3] 0.000434 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010991 _atom_sites.fract_transf_matrix[2][3] -0.004972 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010497 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 2 MN A 1 400 400 MN MN . J 3 PHE A 1 1012 1012 PHE PHE . K 2 MN B 1 400 400 MN MN . L 2 MN C 1 400 400 MN MN . M 3 PHE C 1 1012 1012 PHE PHE . N 2 MN D 1 400 400 MN MN . O 3 PHE D 1 1012 1012 PHE PHE . P 2 MN E 1 400 400 MN MN . Q 3 PHE E 1 1012 1012 PHE PHE . R 2 MN F 1 400 400 MN MN . S 3 PHE F 1 1012 1012 PHE PHE . T 2 MN G 1 400 400 MN MN . U 3 PHE G 1 1012 1012 PHE PHE . V 2 MN H 1 400 400 MN MN . W 3 PHE H 1 1012 1012 PHE PHE . X 4 HOH A 1 2001 2001 HOH HOH . X 4 HOH A 2 2002 2002 HOH HOH . X 4 HOH A 3 2003 2003 HOH HOH . X 4 HOH A 4 2004 2004 HOH HOH . X 4 HOH A 5 2005 2005 HOH HOH . X 4 HOH A 6 2006 2006 HOH HOH . X 4 HOH A 7 2007 2007 HOH HOH . X 4 HOH A 8 2008 2008 HOH HOH . X 4 HOH A 9 2009 2009 HOH HOH . X 4 HOH A 10 2010 2010 HOH HOH . X 4 HOH A 11 2011 2011 HOH HOH . X 4 HOH A 12 2012 2012 HOH HOH . X 4 HOH A 13 2013 2013 HOH HOH . X 4 HOH A 14 2014 2014 HOH HOH . X 4 HOH A 15 2015 2015 HOH HOH . X 4 HOH A 16 2016 2016 HOH HOH . X 4 HOH A 17 2017 2017 HOH HOH . Y 4 HOH B 1 2001 2001 HOH HOH . Y 4 HOH B 2 2002 2002 HOH HOH . Y 4 HOH B 3 2003 2003 HOH HOH . Y 4 HOH B 4 2004 2004 HOH HOH . Y 4 HOH B 5 2005 2005 HOH HOH . Y 4 HOH B 6 2006 2006 HOH HOH . Y 4 HOH B 7 2007 2007 HOH HOH . Y 4 HOH B 8 2008 2008 HOH HOH . Y 4 HOH B 9 2009 2009 HOH HOH . Y 4 HOH B 10 2010 2010 HOH HOH . Y 4 HOH B 11 2011 2011 HOH HOH . Y 4 HOH B 12 2012 2012 HOH HOH . Y 4 HOH B 13 2013 2013 HOH HOH . Y 4 HOH B 14 2014 2014 HOH HOH . Y 4 HOH B 15 2015 2015 HOH HOH . Z 4 HOH C 1 2001 2001 HOH HOH . Z 4 HOH C 2 2002 2002 HOH HOH . Z 4 HOH C 3 2003 2003 HOH HOH . Z 4 HOH C 4 2004 2004 HOH HOH . Z 4 HOH C 5 2005 2005 HOH HOH . Z 4 HOH C 6 2006 2006 HOH HOH . Z 4 HOH C 7 2007 2007 HOH HOH . Z 4 HOH C 8 2008 2008 HOH HOH . Z 4 HOH C 9 2009 2009 HOH HOH . Z 4 HOH C 10 2010 2010 HOH HOH . Z 4 HOH C 11 2011 2011 HOH HOH . Z 4 HOH C 12 2012 2012 HOH HOH . Z 4 HOH C 13 2013 2013 HOH HOH . Z 4 HOH C 14 2014 2014 HOH HOH . AA 4 HOH D 1 2001 2001 HOH HOH . AA 4 HOH D 2 2002 2002 HOH HOH . AA 4 HOH D 3 2003 2003 HOH HOH . AA 4 HOH D 4 2004 2004 HOH HOH . AA 4 HOH D 5 2005 2005 HOH HOH . AA 4 HOH D 6 2006 2006 HOH HOH . AA 4 HOH D 7 2007 2007 HOH HOH . AA 4 HOH D 8 2008 2008 HOH HOH . AA 4 HOH D 9 2009 2009 HOH HOH . AA 4 HOH D 10 2010 2010 HOH HOH . AA 4 HOH D 11 2011 2011 HOH HOH . AA 4 HOH D 12 2012 2012 HOH HOH . AA 4 HOH D 13 2013 2013 HOH HOH . AA 4 HOH D 14 2014 2014 HOH HOH . AA 4 HOH D 15 2015 2015 HOH HOH . AA 4 HOH D 16 2016 2016 HOH HOH . AA 4 HOH D 17 2017 2017 HOH HOH . BA 4 HOH E 1 2001 2001 HOH HOH . BA 4 HOH E 2 2002 2002 HOH HOH . BA 4 HOH E 3 2003 2003 HOH HOH . BA 4 HOH E 4 2004 2004 HOH HOH . BA 4 HOH E 5 2005 2005 HOH HOH . BA 4 HOH E 6 2006 2006 HOH HOH . BA 4 HOH E 7 2007 2007 HOH HOH . CA 4 HOH F 1 2001 2001 HOH HOH . CA 4 HOH F 2 2002 2002 HOH HOH . CA 4 HOH F 3 2003 2003 HOH HOH . CA 4 HOH F 4 2004 2004 HOH HOH . CA 4 HOH F 5 2005 2005 HOH HOH . CA 4 HOH F 6 2006 2006 HOH HOH . CA 4 HOH F 7 2007 2007 HOH HOH . CA 4 HOH F 8 2008 2008 HOH HOH . CA 4 HOH F 9 2009 2009 HOH HOH . CA 4 HOH F 10 2010 2010 HOH HOH . CA 4 HOH F 11 2011 2011 HOH HOH . DA 4 HOH G 1 2001 2001 HOH HOH . DA 4 HOH G 2 2002 2002 HOH HOH . DA 4 HOH G 3 2003 2003 HOH HOH . DA 4 HOH G 4 2004 2004 HOH HOH . DA 4 HOH G 5 2005 2005 HOH HOH . DA 4 HOH G 6 2006 2006 HOH HOH . EA 4 HOH H 1 2001 2001 HOH HOH . EA 4 HOH H 2 2002 2002 HOH HOH . EA 4 HOH H 3 2003 2003 HOH HOH . EA 4 HOH H 4 2004 2004 HOH HOH . EA 4 HOH H 5 2005 2005 HOH HOH . EA 4 HOH H 6 2006 2006 HOH HOH . EA 4 HOH H 7 2007 2007 HOH HOH . EA 4 HOH H 8 2008 2008 HOH HOH . EA 4 HOH H 9 2009 2009 HOH HOH . EA 4 HOH H 10 2010 2010 HOH HOH . EA 4 HOH H 11 2011 2011 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N PHE . . . Q 3 84.009 43.729 48.681 1 60.72 ? N PHE 1012 E 1 HETATM 2 C CA PHE . . . Q 3 84.869 44.124 47.526 1 59.59 ? CA PHE 1012 E 1 HETATM 3 C C PHE . . . Q 3 85.421 42.913 46.768 1 60.34 ? C PHE 1012 E 1 HETATM 4 O O PHE . . . Q 3 86.049 43.117 45.704 1 59.27 ? O PHE 1012 E 1 HETATM 5 C CB PHE . . . Q 3 86.011 45.008 48.025 1 58.61 ? CB PHE 1012 E 1 HETATM 6 C CG PHE . . . Q 3 85.59 46.415 48.342 1 61.34 ? CG PHE 1012 E 1 HETATM 7 C CD1 PHE . . . Q 3 86.261 47.156 49.312 1 61.45 ? CD1 PHE 1012 E 1 HETATM 8 C CD2 PHE . . . Q 3 84.544 47.017 47.644 1 62.27 ? CD2 PHE 1012 E 1 HETATM 9 C CE1 PHE . . . Q 3 85.905 48.48 49.578 1 62.27 ? CE1 PHE 1012 E 1 HETATM 10 C CE2 PHE . . . Q 3 84.179 48.34 47.9 1 63.81 ? CE2 PHE 1012 E 1 HETATM 11 C CZ PHE . . . Q 3 84.862 49.074 48.874 1 64.01 ? CZ PHE 1012 E 1 HETATM 12 O OXT PHE . . . Q 3 85.212 41.769 47.236 1 59.92 ? OXT PHE 1012 E 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 23 _model_server_stats.query_time_ms 290 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 12 #