data_1OGX # _model_server_result.job_id i9hgae9MMu4AO-JTYmQXiA _model_server_result.datetime_utc '2024-10-16 10:31:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1ogx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1128}' # _entry.id 1OGX # _exptl.entry_id 1OGX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 266.334 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description EQUILENIN _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90.56 _cell.angle_gamma 90 _cell.entry_id 1OGX _cell.length_a 88.3 _cell.length_b 72.4 _cell.length_c 51.2 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1OGX _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C18 H18 O2' _chem_comp.formula_weight 266.334 _chem_comp.id EQU _chem_comp.mon_nstd_flag . _chem_comp.name EQUILENIN _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 EQU doub 83 n y C1 C6 EQU sing 84 n y C1 O1 EQU sing 85 n n C2 C3 EQU sing 86 n y C2 H2 EQU sing 87 n n C3 C4 EQU doub 88 n y C3 C10 EQU sing 89 n y C4 C5 EQU sing 90 n y C4 C13 EQU sing 91 n y C5 C6 EQU doub 92 n y C5 H5 EQU sing 93 n n C6 H6 EQU sing 94 n n C10 C11 EQU doub 95 n y C10 H10 EQU sing 96 n n C11 C12 EQU sing 97 n y C11 H11 EQU sing 98 n n C12 C13 EQU doub 99 n y C12 C16 EQU sing 100 n n C13 C19 EQU sing 101 n n C16 C17 EQU sing 102 n n C16 C24 EQU sing 103 n n C16 H16 EQU sing 104 n n C17 C18 EQU sing 105 n n C17 C26 EQU sing 106 n n C17 C27 EQU sing 107 n n C18 C19 EQU sing 108 n n C18 H181 EQU sing 109 n n C18 H182 EQU sing 110 n n C19 H191 EQU sing 111 n n C19 H192 EQU sing 112 n n C24 C25 EQU sing 113 n n C24 H241 EQU sing 114 n n C24 H242 EQU sing 115 n n C25 C26 EQU sing 116 n n C25 H251 EQU sing 117 n n C25 H252 EQU sing 118 n n C26 O26 EQU doub 119 n n C27 H271 EQU sing 120 n n C27 H272 EQU sing 121 n n C27 H273 EQU sing 122 n n O1 HO1 EQU sing 123 n n # _atom_sites.entry_id 1OGX _atom_sites.fract_transf_matrix[1][1] 0.011325 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000111 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013812 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019532 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 EQU A 1 1128 1128 EQU EQU . D 2 EQU B 1 1328 1328 EQU EQU . E 3 HOH A 1 2001 2001 HOH HOH . E 3 HOH A 2 2002 2002 HOH HOH . E 3 HOH A 3 2003 2003 HOH HOH . E 3 HOH A 4 2004 2004 HOH HOH . E 3 HOH A 5 2005 2005 HOH HOH . E 3 HOH A 6 2006 2006 HOH HOH . E 3 HOH A 7 2007 2007 HOH HOH . E 3 HOH A 8 2008 2008 HOH HOH . E 3 HOH A 9 2009 2009 HOH HOH . E 3 HOH A 10 2010 2010 HOH HOH . E 3 HOH A 11 2011 2011 HOH HOH . E 3 HOH A 12 2012 2012 HOH HOH . E 3 HOH A 13 2013 2013 HOH HOH . E 3 HOH A 14 2014 2014 HOH HOH . E 3 HOH A 15 2015 2015 HOH HOH . E 3 HOH A 16 2016 2016 HOH HOH . E 3 HOH A 17 2017 2017 HOH HOH . E 3 HOH A 18 2018 2018 HOH HOH . E 3 HOH A 19 2019 2019 HOH HOH . E 3 HOH A 20 2020 2020 HOH HOH . E 3 HOH A 21 2021 2021 HOH HOH . E 3 HOH A 22 2022 2022 HOH HOH . E 3 HOH A 23 2023 2023 HOH HOH . E 3 HOH A 24 2024 2024 HOH HOH . E 3 HOH A 25 2025 2025 HOH HOH . E 3 HOH A 26 2026 2026 HOH HOH . E 3 HOH A 27 2027 2027 HOH HOH . E 3 HOH A 28 2028 2028 HOH HOH . E 3 HOH A 29 2029 2029 HOH HOH . E 3 HOH A 30 2030 2030 HOH HOH . E 3 HOH A 31 2031 2031 HOH HOH . E 3 HOH A 32 2032 2032 HOH HOH . E 3 HOH A 33 2033 2033 HOH HOH . E 3 HOH A 34 2034 2034 HOH HOH . E 3 HOH A 35 2035 2035 HOH HOH . E 3 HOH A 36 2036 2036 HOH HOH . E 3 HOH A 37 2037 2037 HOH HOH . E 3 HOH A 38 2038 2038 HOH HOH . E 3 HOH A 39 2039 2039 HOH HOH . E 3 HOH A 40 2040 2040 HOH HOH . F 3 HOH B 1 2001 2001 HOH HOH . F 3 HOH B 2 2002 2002 HOH HOH . F 3 HOH B 3 2003 2003 HOH HOH . F 3 HOH B 4 2004 2004 HOH HOH . F 3 HOH B 5 2005 2005 HOH HOH . F 3 HOH B 6 2006 2006 HOH HOH . F 3 HOH B 7 2007 2007 HOH HOH . F 3 HOH B 8 2008 2008 HOH HOH . F 3 HOH B 9 2009 2009 HOH HOH . F 3 HOH B 10 2010 2010 HOH HOH . F 3 HOH B 11 2011 2011 HOH HOH . F 3 HOH B 12 2012 2012 HOH HOH . F 3 HOH B 13 2013 2013 HOH HOH . F 3 HOH B 14 2014 2014 HOH HOH . F 3 HOH B 15 2015 2015 HOH HOH . F 3 HOH B 16 2016 2016 HOH HOH . F 3 HOH B 17 2017 2017 HOH HOH . F 3 HOH B 18 2018 2018 HOH HOH . F 3 HOH B 19 2019 2019 HOH HOH . F 3 HOH B 20 2020 2020 HOH HOH . F 3 HOH B 21 2021 2021 HOH HOH . F 3 HOH B 22 2022 2022 HOH HOH . F 3 HOH B 23 2023 2023 HOH HOH . F 3 HOH B 24 2024 2024 HOH HOH . F 3 HOH B 25 2025 2025 HOH HOH . F 3 HOH B 26 2026 2026 HOH HOH . F 3 HOH B 27 2027 2027 HOH HOH . F 3 HOH B 28 2028 2028 HOH HOH . F 3 HOH B 29 2029 2029 HOH HOH . F 3 HOH B 30 2030 2030 HOH HOH . F 3 HOH B 31 2031 2031 HOH HOH . F 3 HOH B 32 2032 2032 HOH HOH . F 3 HOH B 33 2033 2033 HOH HOH . F 3 HOH B 34 2034 2034 HOH HOH . F 3 HOH B 35 2035 2035 HOH HOH . F 3 HOH B 36 2036 2036 HOH HOH . F 3 HOH B 37 2037 2037 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EQU . . . C 2 22.566 -34.252 -37.622 1 19.82 ? C1 EQU 1128 A 1 HETATM 2 C C2 EQU . . . C 2 22.217 -33.116 -36.876 1 19.81 ? C2 EQU 1128 A 1 HETATM 3 C C3 EQU . . . C 2 23.022 -31.949 -37.011 1 21.42 ? C3 EQU 1128 A 1 HETATM 4 C C4 EQU . . . C 2 24.203 -31.948 -37.925 1 24.79 ? C4 EQU 1128 A 1 HETATM 5 C C5 EQU . . . C 2 24.501 -33.125 -38.655 1 20.61 ? C5 EQU 1128 A 1 HETATM 6 C C6 EQU . . . C 2 23.7 -34.257 -38.507 1 17.92 ? C6 EQU 1128 A 1 HETATM 7 C C10 EQU . . . C 2 22.657 -30.784 -36.238 1 22.26 ? C10 EQU 1128 A 1 HETATM 8 C C11 EQU . . . C 2 23.459 -29.609 -36.366 1 21.01 ? C11 EQU 1128 A 1 HETATM 9 C C12 EQU . . . C 2 24.606 -29.595 -37.249 1 24.75 ? C12 EQU 1128 A 1 HETATM 10 C C13 EQU . . . C 2 24.989 -30.754 -38.032 1 24.09 ? C13 EQU 1128 A 1 HETATM 11 C C16 EQU . . . C 2 25.399 -28.338 -37.354 1 23.63 ? C16 EQU 1128 A 1 HETATM 12 C C17 EQU . . . C 2 26.105 -28.192 -38.732 1 25.12 ? C17 EQU 1128 A 1 HETATM 13 C C18 EQU . . . C 2 26.985 -29.424 -39.039 1 23.2 ? C18 EQU 1128 A 1 HETATM 14 C C19 EQU . . . C 2 26.183 -30.755 -38.965 1 23.69 ? C19 EQU 1128 A 1 HETATM 15 C C24 EQU . . . C 2 24.641 -26.981 -37.287 1 25.63 ? C24 EQU 1128 A 1 HETATM 16 C C25 EQU . . . C 2 25.843 -25.995 -37.481 1 24.96 ? C25 EQU 1128 A 1 HETATM 17 C C26 EQU . . . C 2 26.765 -26.838 -38.433 1 26.13 ? C26 EQU 1128 A 1 HETATM 18 C C27 EQU . . . C 2 25.105 -27.973 -39.878 1 24.05 ? C27 EQU 1128 A 1 HETATM 19 O O1 EQU . . . C 2 21.806 -35.306 -37.461 1 17.07 ? O1 EQU 1128 A 1 HETATM 20 O O26 EQU . . . C 2 27.837 -26.48 -38.863 1 29.46 ? O26 EQU 1128 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 290 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 20 #