data_1OIP
#
_model_server_result.job_id            Ah9VWeJM3VV0ALj2dN1SCg 
_model_server_result.datetime_utc      '2024-11-25 00:54:05' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1oip 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":1278}' 
#
_entry.id    1OIP 
#
_exptl.entry_id    1OIP 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              430.706 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (2R)-2,5,7,8-TETRAMETHYL-2-[(4R,8R)-4,8,12-TRIMETHYLTRIDECYL]CHROMAN-6-OL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1OIP 
_cell.length_a            77.81 
_cell.length_b            77.81 
_cell.length_c            128.36 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1OIP 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        92 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 41 21 2' 
#
_pdbx_struct_assembly.method_details        PQS 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C29 H50 O2' 
_chem_comp.formula_weight    430.706 
_chem_comp.id                VIV 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (2R)-2,5,7,8-TETRAMETHYL-2-[(4R,8R)-4,8,12-TRIMETHYLTRIDECYL]CHROMAN-6-OL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O1 C4 VIV sing 380 n n 
O1 C9 VIV sing 381 n n 
O2 C7 VIV sing 382 n n 
O2 HO21 VIV sing 383 n n 
C1 C23 VIV sing 384 n n 
C1 HC11 VIV sing 385 n n 
C1 HC12 VIV sing 386 n n 
C1 HC13 VIV sing 387 n n 
C2 C3 VIV doub 388 n y 
C2 C7 VIV sing 389 n y 
C2 C8 VIV sing 390 n n 
C3 C4 VIV sing 391 n y 
C3 C10 VIV sing 392 n n 
C4 C5 VIV doub 393 n y 
C5 C6 VIV sing 394 n y 
C5 C12 VIV sing 395 n n 
C6 C7 VIV doub 396 n y 
C6 C13 VIV sing 397 n n 
C8 HC81 VIV sing 398 n n 
C8 HC82 VIV sing 399 n n 
C8 HC83 VIV sing 400 n n 
C9 C11 VIV sing 401 n n 
C9 C14 VIV sing 402 n n 
C9 C15 VIV sing 403 n n 
C10 C11 VIV sing 404 n n 
C10 H101 VIV sing 405 n n 
C10 H102 VIV sing 406 n n 
C11 H111 VIV sing 407 n n 
C11 H112 VIV sing 408 n n 
C12 H121 VIV sing 409 n n 
C12 H122 VIV sing 410 n n 
C12 H123 VIV sing 411 n n 
C13 H131 VIV sing 412 n n 
C13 H132 VIV sing 413 n n 
C13 H133 VIV sing 414 n n 
C14 H141 VIV sing 415 n n 
C14 H142 VIV sing 416 n n 
C14 H143 VIV sing 417 n n 
C15 C16 VIV sing 418 n n 
C15 H151 VIV sing 419 n n 
C15 H152 VIV sing 420 n n 
C16 C17 VIV sing 421 n n 
C16 H161 VIV sing 422 n n 
C16 H162 VIV sing 423 n n 
C17 C18 VIV sing 424 n n 
C17 H171 VIV sing 425 n n 
C17 H172 VIV sing 426 n n 
C18 C19 VIV sing 427 n n 
C18 C20 VIV sing 428 n n 
C18 H18 VIV sing 429 n n 
C19 H191 VIV sing 430 n n 
C19 H192 VIV sing 431 n n 
C19 H193 VIV sing 432 n n 
C20 C21 VIV sing 433 n n 
C20 H201 VIV sing 434 n n 
C20 H202 VIV sing 435 n n 
C21 C22 VIV sing 436 n n 
C21 H211 VIV sing 437 n n 
C21 H212 VIV sing 438 n n 
C22 C23 VIV sing 439 n n 
C22 H221 VIV sing 440 n n 
C22 H222 VIV sing 441 n n 
C23 C24 VIV sing 442 n n 
C23 H23 VIV sing 443 n n 
C24 C25 VIV sing 444 n n 
C24 H241 VIV sing 445 n n 
C24 H242 VIV sing 446 n n 
C25 C26 VIV sing 447 n n 
C25 H251 VIV sing 448 n n 
C25 H252 VIV sing 449 n n 
C26 C27 VIV sing 450 n n 
C26 H261 VIV sing 451 n n 
C26 H262 VIV sing 452 n n 
C27 C28 VIV sing 453 n n 
C27 C29 VIV sing 454 n n 
C27 H27 VIV sing 455 n n 
C28 H281 VIV sing 456 n n 
C28 H282 VIV sing 457 n n 
C28 H283 VIV sing 458 n n 
C29 H291 VIV sing 459 n n 
C29 H292 VIV sing 460 n n 
C29 H293 VIV sing 461 n n 
#
_atom_sites.entry_id                     1OIP 
_atom_sites.fract_transf_matrix[1][1]    0.012852 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012852 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00779 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 SO4 A 1 1276 1276 SO4 SO4 . 
C 2 SO4 A 1 1277 1277 SO4 SO4 . 
D 3 VIV A 1 1278 1278 VIV VIV . 
E 4 HOH A 1 2001 2001 HOH HOH . 
E 4 HOH A 2 2002 2002 HOH HOH . 
E 4 HOH A 3 2003 2003 HOH HOH . 
E 4 HOH A 4 2004 2004 HOH HOH . 
E 4 HOH A 5 2005 2005 HOH HOH . 
E 4 HOH A 6 2006 2006 HOH HOH . 
E 4 HOH A 7 2007 2007 HOH HOH . 
E 4 HOH A 8 2008 2008 HOH HOH . 
E 4 HOH A 9 2009 2009 HOH HOH . 
E 4 HOH A 10 2010 2010 HOH HOH . 
E 4 HOH A 11 2011 2011 HOH HOH . 
E 4 HOH A 12 2012 2012 HOH HOH . 
E 4 HOH A 13 2013 2013 HOH HOH . 
E 4 HOH A 14 2014 2014 HOH HOH . 
E 4 HOH A 15 2015 2015 HOH HOH . 
E 4 HOH A 16 2016 2016 HOH HOH . 
E 4 HOH A 17 2017 2017 HOH HOH . 
E 4 HOH A 18 2018 2018 HOH HOH . 
E 4 HOH A 19 2019 2019 HOH HOH . 
E 4 HOH A 20 2020 2020 HOH HOH . 
E 4 HOH A 21 2021 2021 HOH HOH . 
E 4 HOH A 22 2022 2022 HOH HOH . 
E 4 HOH A 23 2023 2023 HOH HOH . 
E 4 HOH A 24 2024 2024 HOH HOH . 
E 4 HOH A 25 2025 2025 HOH HOH . 
E 4 HOH A 26 2026 2026 HOH HOH . 
E 4 HOH A 27 2027 2027 HOH HOH . 
E 4 HOH A 28 2028 2028 HOH HOH . 
E 4 HOH A 29 2029 2029 HOH HOH . 
E 4 HOH A 30 2030 2030 HOH HOH . 
E 4 HOH A 31 2031 2031 HOH HOH . 
E 4 HOH A 32 2032 2032 HOH HOH . 
E 4 HOH A 33 2033 2033 HOH HOH . 
E 4 HOH A 34 2034 2034 HOH HOH . 
E 4 HOH A 35 2035 2035 HOH HOH . 
E 4 HOH A 36 2036 2036 HOH HOH . 
E 4 HOH A 37 2037 2037 HOH HOH . 
E 4 HOH A 38 2038 2038 HOH HOH . 
E 4 HOH A 39 2039 2039 HOH HOH . 
E 4 HOH A 40 2040 2040 HOH HOH . 
E 4 HOH A 41 2041 2041 HOH HOH . 
E 4 HOH A 42 2042 2042 HOH HOH . 
E 4 HOH A 43 2043 2043 HOH HOH . 
E 4 HOH A 44 2044 2044 HOH HOH . 
E 4 HOH A 45 2045 2045 HOH HOH . 
E 4 HOH A 46 2046 2046 HOH HOH . 
E 4 HOH A 47 2047 2047 HOH HOH . 
E 4 HOH A 48 2048 2048 HOH HOH . 
E 4 HOH A 49 2049 2049 HOH HOH . 
E 4 HOH A 50 2050 2050 HOH HOH . 
E 4 HOH A 51 2051 2051 HOH HOH . 
E 4 HOH A 52 2052 2052 HOH HOH . 
E 4 HOH A 53 2053 2053 HOH HOH . 
E 4 HOH A 54 2054 2054 HOH HOH . 
E 4 HOH A 55 2055 2055 HOH HOH . 
E 4 HOH A 56 2056 2056 HOH HOH . 
E 4 HOH A 57 2057 2057 HOH HOH . 
E 4 HOH A 58 2058 2058 HOH HOH . 
E 4 HOH A 59 2059 2059 HOH HOH . 
E 4 HOH A 60 2060 2060 HOH HOH . 
E 4 HOH A 61 2061 2061 HOH HOH . 
E 4 HOH A 62 2062 2062 HOH HOH . 
E 4 HOH A 63 2063 2063 HOH HOH . 
E 4 HOH A 64 2064 2064 HOH HOH . 
E 4 HOH A 65 2065 2065 HOH HOH . 
E 4 HOH A 66 2066 2066 HOH HOH . 
E 4 HOH A 67 2067 2067 HOH HOH . 
E 4 HOH A 68 2068 2068 HOH HOH . 
E 4 HOH A 69 2069 2069 HOH HOH . 
E 4 HOH A 70 2070 2070 HOH HOH . 
E 4 HOH A 71 2071 2071 HOH HOH . 
E 4 HOH A 72 2072 2072 HOH HOH . 
E 4 HOH A 73 2073 2073 HOH HOH . 
E 4 HOH A 74 2074 2074 HOH HOH . 
E 4 HOH A 75 2075 2075 HOH HOH . 
E 4 HOH A 76 2076 2076 HOH HOH . 
E 4 HOH A 77 2077 2077 HOH HOH . 
E 4 HOH A 78 2078 2078 HOH HOH . 
E 4 HOH A 79 2079 2079 HOH HOH . 
E 4 HOH A 80 2080 2080 HOH HOH . 
E 4 HOH A 81 2081 2081 HOH HOH . 
E 4 HOH A 82 2082 2082 HOH HOH . 
E 4 HOH A 83 2083 2083 HOH HOH . 
E 4 HOH A 84 2084 2084 HOH HOH . 
E 4 HOH A 85 2085 2085 HOH HOH . 
E 4 HOH A 86 2086 2086 HOH HOH . 
E 4 HOH A 87 2087 2087 HOH HOH . 
E 4 HOH A 88 2088 2088 HOH HOH . 
E 4 HOH A 89 2089 2089 HOH HOH . 
E 4 HOH A 90 2090 2090 HOH HOH . 
E 4 HOH A 91 2091 2091 HOH HOH . 
E 4 HOH A 92 2092 2092 HOH HOH . 
E 4 HOH A 93 2093 2093 HOH HOH . 
E 4 HOH A 94 2094 2094 HOH HOH . 
E 4 HOH A 95 2095 2095 HOH HOH . 
E 4 HOH A 96 2096 2096 HOH HOH . 
E 4 HOH A 97 2097 2097 HOH HOH . 
E 4 HOH A 98 2098 2098 HOH HOH . 
E 4 HOH A 99 2099 2099 HOH HOH . 
E 4 HOH A 100 2100 2100 HOH HOH . 
E 4 HOH A 101 2101 2101 HOH HOH . 
E 4 HOH A 102 2102 2102 HOH HOH . 
E 4 HOH A 103 2103 2103 HOH HOH . 
E 4 HOH A 104 2104 2104 HOH HOH . 
E 4 HOH A 105 2105 2105 HOH HOH . 
E 4 HOH A 106 2106 2106 HOH HOH . 
E 4 HOH A 107 2107 2107 HOH HOH . 
E 4 HOH A 108 2108 2108 HOH HOH . 
E 4 HOH A 109 2109 2109 HOH HOH . 
E 4 HOH A 110 2110 2110 HOH HOH . 
E 4 HOH A 111 2111 2111 HOH HOH . 
E 4 HOH A 112 2112 2112 HOH HOH . 
E 4 HOH A 113 2113 2113 HOH HOH . 
E 4 HOH A 114 2114 2114 HOH HOH . 
E 4 HOH A 115 2115 2115 HOH HOH . 
E 4 HOH A 116 2116 2116 HOH HOH . 
E 4 HOH A 117 2117 2117 HOH HOH . 
E 4 HOH A 118 2118 2118 HOH HOH . 
E 4 HOH A 119 2119 2119 HOH HOH . 
E 4 HOH A 120 2120 2120 HOH HOH . 
E 4 HOH A 121 2121 2121 HOH HOH . 
E 4 HOH A 122 2122 2122 HOH HOH . 
E 4 HOH A 123 2123 2123 HOH HOH . 
E 4 HOH A 124 2124 2124 HOH HOH . 
E 4 HOH A 125 2125 2125 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O1 VIV . . . D 3 -12.039 1.527 18.586 1 19.15 ? O1 VIV 1278 A 1 
HETATM 2 O O2 VIV . . . D 3 -11.121 -1.975 14.463 1 21.31 ? O2 VIV 1278 A 1 
HETATM 3 C C1 VIV . . . D 3 -11.194 10.526 18.263 1 22.62 ? C1 VIV 1278 A 1 
HETATM 4 C C2 VIV . . . D 3 -11.705 0.201 15.179 1 21.04 ? C2 VIV 1278 A 1 
HETATM 5 C C3 VIV . . . D 3 -11.947 1.107 16.215 1 18.89 ? C3 VIV 1278 A 1 
HETATM 6 C C4 VIV . . . D 3 -11.816 0.666 17.528 1 21.57 ? C4 VIV 1278 A 1 
HETATM 7 C C5 VIV . . . D 3 -11.464 -0.648 17.813 1 18.13 ? C5 VIV 1278 A 1 
HETATM 8 C C6 VIV . . . D 3 -11.221 -1.554 16.789 1 19.43 ? C6 VIV 1278 A 1 
HETATM 9 C C7 VIV . . . D 3 -11.347 -1.125 15.468 1 21.52 ? C7 VIV 1278 A 1 
HETATM 10 C C8 VIV . . . D 3 -11.844 0.664 13.737 1 19.87 ? C8 VIV 1278 A 1 
HETATM 11 C C9 VIV . . . D 3 -12.067 2.958 18.341 1 17.26 ? C9 VIV 1278 A 1 
HETATM 12 C C10 VIV . . . D 3 -12.353 2.554 15.887 1 20.7 ? C10 VIV 1278 A 1 
HETATM 13 C C11 VIV . . . D 3 -12.948 3.274 17.143 1 18.77 ? C11 VIV 1278 A 1 
HETATM 14 C C12 VIV . . . D 3 -11.334 -1.076 19.263 1 19.95 ? C12 VIV 1278 A 1 
HETATM 15 C C13 VIV . . . D 3 -10.83 -2.99 17.154 1 16.91 ? C13 VIV 1278 A 1 
HETATM 16 C C14 VIV . . . D 3 -10.662 3.418 17.996 1 17.07 ? C14 VIV 1278 A 1 
HETATM 17 C C15 VIV . . . D 3 -12.534 3.61 19.671 1 16.16 ? C15 VIV 1278 A 1 
HETATM 18 C C16 VIV . . . D 3 -12.617 5.138 19.597 1 17.86 ? C16 VIV 1278 A 1 
HETATM 19 C C17 VIV . . . D 3 -13.162 5.677 20.933 1 19.38 ? C17 VIV 1278 A 1 
HETATM 20 C C18 VIV . . . D 3 -13.233 7.217 20.941 1 21.12 ? C18 VIV 1278 A 1 
HETATM 21 C C19 VIV . . . D 3 -13.54 7.644 22.39 1 23.05 ? C19 VIV 1278 A 1 
HETATM 22 C C20 VIV . . . D 3 -14.314 7.697 19.971 1 21.72 ? C20 VIV 1278 A 1 
HETATM 23 C C21 VIV . . . D 3 -14.521 9.229 19.882 1 25.71 ? C21 VIV 1278 A 1 
HETATM 24 C C22 VIV . . . D 3 -13.205 9.989 19.694 1 22.63 ? C22 VIV 1278 A 1 
HETATM 25 C C23 VIV . . . D 3 -12.467 9.671 18.372 1 22.54 ? C23 VIV 1278 A 1 
HETATM 26 C C24 VIV . . . D 3 -13.33 9.85 17.115 1 22.02 ? C24 VIV 1278 A 1 
HETATM 27 C C25 VIV . . . D 3 -12.562 9.438 15.831 1 23.25 ? C25 VIV 1278 A 1 
HETATM 28 C C26 VIV . . . D 3 -11.917 8.03 15.902 1 21.81 ? C26 VIV 1278 A 1 
HETATM 29 C C27 VIV . . . D 3 -11.506 7.5 14.511 1 28.41 ? C27 VIV 1278 A 1 
HETATM 30 C C28 VIV . . . D 3 -10.353 8.324 13.94 1 24.09 ? C28 VIV 1278 A 1 
HETATM 31 C C29 VIV . . . D 3 -11.114 6.011 14.532 1 24.78 ? C29 VIV 1278 A 1 
#
_model_server_stats.io_time_ms              5 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           365 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           31 
#