data_1OMS # _model_server_result.job_id 9ClP55siLwGv-t9G3MvNqw _model_server_result.datetime_utc '2024-10-12 14:28:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1oms # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":511}' # _entry.id 1OMS # _exptl.entry_id 1OMS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 13 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1OMS _cell.length_a 71.644 _cell.length_b 71.644 _cell.length_c 375.409 _cell.Z_PDB 54 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1OMS _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N ? 2 P N N ? 2 Q N N ? 2 R N N ? 2 S N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C MSE 4 A MSE 1 1_555 A N GLN 5 A GLN 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale2 A C PRO 53 A PRO 50 1_555 A N MSE 54 A MSE 51 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale3 A C MSE 54 A MSE 51 1_555 A N ASN 55 A ASN 52 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale4 A C LEU 73 A LEU 70 1_555 A N MSE 74 A MSE 71 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale5 A C MSE 74 A MSE 71 1_555 A N SER 75 A SER 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale6 B C MSE 4 B MSE 1 1_555 B N GLN 5 B GLN 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale7 B C PRO 53 B PRO 50 1_555 B N MSE 54 B MSE 51 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale8 B C MSE 54 B MSE 51 1_555 B N ASN 55 B ASN 52 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale9 B C LEU 73 B LEU 70 1_555 B N MSE 74 B MSE 71 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale10 B C MSE 74 B MSE 71 1_555 B N SER 75 B SER 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale11 C C HIS 3 C HIS 0 1_555 C N MSE 4 C MSE 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale12 C C MSE 4 C MSE 1 1_555 C N GLN 5 C GLN 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale13 C C PRO 53 C PRO 50 1_555 C N MSE 54 C MSE 51 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale14 C C MSE 54 C MSE 51 1_555 C N ASN 55 C ASN 52 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale15 C C LEU 73 C LEU 70 1_555 C N MSE 74 C MSE 71 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale16 C C MSE 74 C MSE 71 1_555 C N SER 75 C SER 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1OMS _atom_sites.fract_transf_matrix[1][1] 0.013958 _atom_sites.fract_transf_matrix[1][2] 0.008059 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016117 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.002664 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 SO4 A 1 502 2 SO4 SO4 . E 2 SO4 A 1 510 10 SO4 SO4 . F 2 SO4 A 1 512 12 SO4 SO4 . G 2 SO4 A 1 514 14 SO4 SO4 . H 2 SO4 B 1 501 1 SO4 SO4 . I 2 SO4 B 1 503 3 SO4 SO4 . J 2 SO4 B 1 504 4 SO4 SO4 . K 2 SO4 B 1 509 9 SO4 SO4 . L 2 SO4 B 1 511 11 SO4 SO4 . M 3 PG4 B 1 401 1 PG4 PG4 . N 3 PG4 B 1 404 4 PG4 PG4 . O 4 SO2 B 1 601 1 SO2 SO2 . P 2 SO4 C 1 505 5 SO4 SO4 . Q 2 SO4 C 1 506 6 SO4 SO4 . R 2 SO4 C 1 507 7 SO4 SO4 . S 2 SO4 C 1 508 8 SO4 SO4 . T 3 PG4 C 1 402 2 PG4 PG4 . U 3 PG4 C 1 403 3 PG4 PG4 . V 3 PG4 C 1 405 5 PG4 PG4 . W 5 GOL C 1 301 1 GOL GOL . X 6 HOH A 1 515 5 HOH HOH . X 6 HOH A 2 516 10 HOH HOH . X 6 HOH A 3 517 15 HOH HOH . X 6 HOH A 4 518 17 HOH HOH . X 6 HOH A 5 519 25 HOH HOH . X 6 HOH A 6 520 27 HOH HOH . X 6 HOH A 7 521 31 HOH HOH . X 6 HOH A 8 522 39 HOH HOH . X 6 HOH A 9 523 40 HOH HOH . X 6 HOH A 10 524 41 HOH HOH . X 6 HOH A 11 525 42 HOH HOH . X 6 HOH A 12 526 43 HOH HOH . X 6 HOH A 13 527 48 HOH HOH . X 6 HOH A 14 528 51 HOH HOH . X 6 HOH A 15 529 54 HOH HOH . X 6 HOH A 16 530 73 HOH HOH . X 6 HOH A 17 531 74 HOH HOH . X 6 HOH A 18 532 79 HOH HOH . X 6 HOH A 19 533 81 HOH HOH . X 6 HOH A 20 534 85 HOH HOH . X 6 HOH A 21 535 86 HOH HOH . X 6 HOH A 22 536 96 HOH HOH . X 6 HOH A 23 537 101 HOH HOH . X 6 HOH A 24 538 105 HOH HOH . X 6 HOH A 25 539 107 HOH HOH . X 6 HOH A 26 540 111 HOH HOH . X 6 HOH A 27 541 114 HOH HOH . X 6 HOH A 28 542 120 HOH HOH . X 6 HOH A 29 543 121 HOH HOH . X 6 HOH A 30 544 124 HOH HOH . X 6 HOH A 31 545 127 HOH HOH . X 6 HOH A 32 546 128 HOH HOH . X 6 HOH A 33 547 130 HOH HOH . X 6 HOH A 34 548 133 HOH HOH . X 6 HOH A 35 549 134 HOH HOH . X 6 HOH A 36 550 135 HOH HOH . X 6 HOH A 37 551 139 HOH HOH . X 6 HOH A 38 552 140 HOH HOH . X 6 HOH A 39 553 153 HOH HOH . X 6 HOH A 40 554 159 HOH HOH . X 6 HOH A 41 555 160 HOH HOH . X 6 HOH A 42 556 164 HOH HOH . X 6 HOH A 43 557 165 HOH HOH . X 6 HOH A 44 558 173 HOH HOH . X 6 HOH A 45 559 178 HOH HOH . X 6 HOH A 46 560 179 HOH HOH . X 6 HOH A 47 561 185 HOH HOH . X 6 HOH A 48 562 190 HOH HOH . X 6 HOH A 49 563 198 HOH HOH . X 6 HOH A 50 564 201 HOH HOH . X 6 HOH A 51 565 205 HOH HOH . X 6 HOH A 52 566 206 HOH HOH . X 6 HOH A 53 567 210 HOH HOH . X 6 HOH A 54 568 211 HOH HOH . X 6 HOH A 55 569 212 HOH HOH . X 6 HOH A 56 570 214 HOH HOH . Y 6 HOH B 1 602 11 HOH HOH . Y 6 HOH B 2 603 13 HOH HOH . Y 6 HOH B 3 604 14 HOH HOH . Y 6 HOH B 4 605 18 HOH HOH . Y 6 HOH B 5 606 19 HOH HOH . Y 6 HOH B 6 607 20 HOH HOH . Y 6 HOH B 7 608 26 HOH HOH . Y 6 HOH B 8 609 30 HOH HOH . Y 6 HOH B 9 610 32 HOH HOH . Y 6 HOH B 10 611 33 HOH HOH . Y 6 HOH B 11 612 37 HOH HOH . Y 6 HOH B 12 613 38 HOH HOH . Y 6 HOH B 13 614 45 HOH HOH . Y 6 HOH B 14 615 46 HOH HOH . Y 6 HOH B 15 616 55 HOH HOH . Y 6 HOH B 16 617 56 HOH HOH . Y 6 HOH B 17 618 58 HOH HOH . Y 6 HOH B 18 619 59 HOH HOH . Y 6 HOH B 19 620 64 HOH HOH . Y 6 HOH B 20 621 69 HOH HOH . Y 6 HOH B 21 622 70 HOH HOH . Y 6 HOH B 22 623 82 HOH HOH . Y 6 HOH B 23 624 87 HOH HOH . Y 6 HOH B 24 625 88 HOH HOH . Y 6 HOH B 25 626 89 HOH HOH . Y 6 HOH B 26 627 90 HOH HOH . Y 6 HOH B 27 628 91 HOH HOH . Y 6 HOH B 28 629 92 HOH HOH . Y 6 HOH B 29 630 94 HOH HOH . Y 6 HOH B 30 631 99 HOH HOH . Y 6 HOH B 31 632 102 HOH HOH . Y 6 HOH B 32 633 103 HOH HOH . Y 6 HOH B 33 634 109 HOH HOH . Y 6 HOH B 34 635 110 HOH HOH . Y 6 HOH B 35 636 113 HOH HOH . Y 6 HOH B 36 637 115 HOH HOH . Y 6 HOH B 37 638 122 HOH HOH . Y 6 HOH B 38 639 123 HOH HOH . Y 6 HOH B 39 640 131 HOH HOH . Y 6 HOH B 40 641 132 HOH HOH . Y 6 HOH B 41 642 137 HOH HOH . Y 6 HOH B 42 643 138 HOH HOH . Y 6 HOH B 43 644 141 HOH HOH . Y 6 HOH B 44 645 144 HOH HOH . Y 6 HOH B 45 646 145 HOH HOH . Y 6 HOH B 46 647 147 HOH HOH . Y 6 HOH B 47 648 148 HOH HOH . Y 6 HOH B 48 649 151 HOH HOH . Y 6 HOH B 49 650 161 HOH HOH . Y 6 HOH B 50 651 163 HOH HOH . Y 6 HOH B 51 652 166 HOH HOH . Y 6 HOH B 52 653 167 HOH HOH . Y 6 HOH B 53 654 170 HOH HOH . Y 6 HOH B 54 655 171 HOH HOH . Y 6 HOH B 55 656 172 HOH HOH . Y 6 HOH B 56 657 174 HOH HOH . Y 6 HOH B 57 658 175 HOH HOH . Y 6 HOH B 58 659 176 HOH HOH . Y 6 HOH B 59 660 177 HOH HOH . Y 6 HOH B 60 661 180 HOH HOH . Y 6 HOH B 61 662 183 HOH HOH . Y 6 HOH B 62 663 186 HOH HOH . Y 6 HOH B 63 664 188 HOH HOH . Y 6 HOH B 64 665 191 HOH HOH . Y 6 HOH B 65 666 192 HOH HOH . Y 6 HOH B 66 667 202 HOH HOH . Y 6 HOH B 67 668 207 HOH HOH . Y 6 HOH B 68 669 209 HOH HOH . Z 6 HOH C 1 509 1 HOH HOH . Z 6 HOH C 2 510 2 HOH HOH . Z 6 HOH C 3 511 3 HOH HOH . Z 6 HOH C 4 512 4 HOH HOH . Z 6 HOH C 5 513 6 HOH HOH . Z 6 HOH C 6 514 7 HOH HOH . Z 6 HOH C 7 515 8 HOH HOH . Z 6 HOH C 8 516 9 HOH HOH . Z 6 HOH C 9 517 12 HOH HOH . Z 6 HOH C 10 518 16 HOH HOH . Z 6 HOH C 11 519 21 HOH HOH . Z 6 HOH C 12 520 22 HOH HOH . Z 6 HOH C 13 521 23 HOH HOH . Z 6 HOH C 14 522 24 HOH HOH . Z 6 HOH C 15 523 28 HOH HOH . Z 6 HOH C 16 524 29 HOH HOH . Z 6 HOH C 17 525 34 HOH HOH . Z 6 HOH C 18 526 35 HOH HOH . Z 6 HOH C 19 527 36 HOH HOH . Z 6 HOH C 20 528 44 HOH HOH . Z 6 HOH C 21 529 47 HOH HOH . Z 6 HOH C 22 530 49 HOH HOH . Z 6 HOH C 23 531 50 HOH HOH . Z 6 HOH C 24 532 52 HOH HOH . Z 6 HOH C 25 533 53 HOH HOH . Z 6 HOH C 26 534 57 HOH HOH . Z 6 HOH C 27 535 60 HOH HOH . Z 6 HOH C 28 536 61 HOH HOH . Z 6 HOH C 29 537 62 HOH HOH . Z 6 HOH C 30 538 63 HOH HOH . Z 6 HOH C 31 539 65 HOH HOH . Z 6 HOH C 32 540 66 HOH HOH . Z 6 HOH C 33 541 67 HOH HOH . Z 6 HOH C 34 542 68 HOH HOH . Z 6 HOH C 35 543 71 HOH HOH . Z 6 HOH C 36 544 72 HOH HOH . Z 6 HOH C 37 545 75 HOH HOH . Z 6 HOH C 38 546 76 HOH HOH . Z 6 HOH C 39 547 77 HOH HOH . Z 6 HOH C 40 548 78 HOH HOH . Z 6 HOH C 41 549 80 HOH HOH . Z 6 HOH C 42 550 83 HOH HOH . Z 6 HOH C 43 551 84 HOH HOH . Z 6 HOH C 44 552 93 HOH HOH . Z 6 HOH C 45 553 95 HOH HOH . Z 6 HOH C 46 554 97 HOH HOH . Z 6 HOH C 47 555 98 HOH HOH . Z 6 HOH C 48 556 100 HOH HOH . Z 6 HOH C 49 557 104 HOH HOH . Z 6 HOH C 50 558 106 HOH HOH . Z 6 HOH C 51 559 108 HOH HOH . Z 6 HOH C 52 560 112 HOH HOH . Z 6 HOH C 53 561 116 HOH HOH . Z 6 HOH C 54 562 117 HOH HOH . Z 6 HOH C 55 563 118 HOH HOH . Z 6 HOH C 56 564 119 HOH HOH . Z 6 HOH C 57 565 125 HOH HOH . Z 6 HOH C 58 566 126 HOH HOH . Z 6 HOH C 59 567 129 HOH HOH . Z 6 HOH C 60 568 136 HOH HOH . Z 6 HOH C 61 569 142 HOH HOH . Z 6 HOH C 62 570 143 HOH HOH . Z 6 HOH C 63 571 146 HOH HOH . Z 6 HOH C 64 572 149 HOH HOH . Z 6 HOH C 65 573 150 HOH HOH . Z 6 HOH C 66 574 152 HOH HOH . Z 6 HOH C 67 575 154 HOH HOH . Z 6 HOH C 68 576 155 HOH HOH . Z 6 HOH C 69 577 156 HOH HOH . Z 6 HOH C 70 578 157 HOH HOH . Z 6 HOH C 71 579 158 HOH HOH . Z 6 HOH C 72 580 162 HOH HOH . Z 6 HOH C 73 581 168 HOH HOH . Z 6 HOH C 74 582 169 HOH HOH . Z 6 HOH C 75 583 181 HOH HOH . Z 6 HOH C 76 584 182 HOH HOH . Z 6 HOH C 77 585 184 HOH HOH . Z 6 HOH C 78 586 187 HOH HOH . Z 6 HOH C 79 587 189 HOH HOH . Z 6 HOH C 80 588 193 HOH HOH . Z 6 HOH C 81 589 194 HOH HOH . Z 6 HOH C 82 590 195 HOH HOH . Z 6 HOH C 83 591 196 HOH HOH . Z 6 HOH C 84 592 197 HOH HOH . Z 6 HOH C 85 593 199 HOH HOH . Z 6 HOH C 86 594 200 HOH HOH . Z 6 HOH C 87 595 203 HOH HOH . Z 6 HOH C 88 596 204 HOH HOH . Z 6 HOH C 89 597 208 HOH HOH . Z 6 HOH C 90 598 213 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . L 2 21.317 -13.774 127.503 1 58.92 ? S SO4 511 B 1 HETATM 2 O O1 SO4 . . . L 2 22.015 -14.657 128.464 1 58.96 ? O1 SO4 511 B 1 HETATM 3 O O2 SO4 . . . L 2 22.111 -13.676 126.259 1 59.71 ? O2 SO4 511 B 1 HETATM 4 O O3 SO4 . . . L 2 20.006 -14.358 127.154 1 60.31 ? O3 SO4 511 B 1 HETATM 5 O O4 SO4 . . . L 2 21.128 -12.429 128.104 1 57.52 ? O4 SO4 511 B 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 313 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 5 #