data_1ON5
#
_model_server_result.job_id            cjwUEBQb21dzVsu5FtvloQ 
_model_server_result.datetime_utc      '2025-09-05 01:37:40' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1on5 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":1}' 
#
_entry.id    1ON5 
#
_exptl.entry_id    1ON5 
_exptl.method      'SOLUTION NMR' 
#
_entity.details                     ? 
_entity.formula_weight              408.571 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CHOLIC ACID' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 C C24 CHD . A CHD 1 1_555 A N5' 5AT 1 A 5AT 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.46 ? 
covale ? covale2 A O3' 5AT 1 A 5AT 2 1_555 A P DG 2 A DG 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.609 ? 
covale ? covale3 D C24 CHD . B CHD 1 1_555 B N5' 5AT 1 B 5AT 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.46 ? 
covale ? covale4 B O3' 5AT 1 B 5AT 2 1_555 B P DG 2 B DG 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.61 ? 
hydrog WATSON-CRICK hydrog1 A N3 5AT 1 A 5AT 2 1_555 B N1 DA 6 B DA 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog2 A O4 5AT 1 A 5AT 2 1_555 B N6 DA 6 B DA 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog3 A N1 DG 2 A DG 3 1_555 B N3 DC 5 B DC 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog4 A N2 DG 2 A DG 3 1_555 B O2 DC 5 B DC 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog5 A O6 DG 2 A DG 3 1_555 B N4 DC 5 B DC 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog6 A N3 DC 3 A DC 4 1_555 B N1 DG 4 B DG 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog7 A N4 DC 3 A DC 4 1_555 B O6 DG 4 B DG 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog8 A O2 DC 3 A DC 4 1_555 B N2 DG 4 B DG 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog9 A N1 DG 4 A DG 5 1_555 B N3 DC 3 B DC 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog10 A N2 DG 4 A DG 5 1_555 B O2 DC 3 B DC 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog11 A O6 DG 4 A DG 5 1_555 B N4 DC 3 B DC 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog12 A N3 DC 5 A DC 6 1_555 B N1 DG 2 B DG 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog13 A N4 DC 5 A DC 6 1_555 B O6 DG 2 B DG 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog14 A O2 DC 5 A DC 6 1_555 B N2 DG 2 B DG 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog15 A N1 DA 6 A DA 7 1_555 B N3 5AT 1 B 5AT 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog16 A N6 DA 6 A DA 7 1_555 B O4 5AT 1 B 5AT 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
#
_chem_comp.formula           'C24 H40 O5' 
_chem_comp.formula_weight    408.571 
_chem_comp.id                CHD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CHOLIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 CHD sing 34 n n 
C1 C10 CHD sing 35 n n 
C1 H11 CHD sing 36 n n 
C1 H12A CHD sing 37 n n 
C2 C3 CHD sing 38 n n 
C2 H21 CHD sing 39 n n 
C2 H22 CHD sing 40 n n 
C3 O3 CHD sing 41 n n 
C3 C4 CHD sing 42 n n 
C3 H3 CHD sing 43 n n 
O3 HO3 CHD sing 44 n n 
C4 C5 CHD sing 45 n n 
C4 H41 CHD sing 46 n n 
C4 H42 CHD sing 47 n n 
C5 C6 CHD sing 48 n n 
C5 C10 CHD sing 49 n n 
C5 H5 CHD sing 50 n n 
C6 C7 CHD sing 51 n n 
C6 H61 CHD sing 52 n n 
C6 H62 CHD sing 53 n n 
C7 O7 CHD sing 54 n n 
C7 C8 CHD sing 55 n n 
C7 H7 CHD sing 56 n n 
O7 HO7 CHD sing 57 n n 
C8 C9 CHD sing 58 n n 
C8 C14 CHD sing 59 n n 
C8 H8 CHD sing 60 n n 
C9 C10 CHD sing 61 n n 
C9 C11 CHD sing 62 n n 
C9 H9 CHD sing 63 n n 
C10 C19 CHD sing 64 n n 
C11 C12 CHD sing 65 n n 
C11 H111 CHD sing 66 n n 
C11 H112 CHD sing 67 n n 
C12 O12 CHD sing 68 n n 
C12 C13 CHD sing 69 n n 
C12 H12 CHD sing 70 n n 
O12 HO12 CHD sing 71 n n 
C13 C14 CHD sing 72 n n 
C13 C17 CHD sing 73 n n 
C13 C18 CHD sing 74 n n 
C14 C15 CHD sing 75 n n 
C14 H14 CHD sing 76 n n 
C15 C16 CHD sing 77 n n 
C15 H151 CHD sing 78 n n 
C15 H152 CHD sing 79 n n 
C16 C17 CHD sing 80 n n 
C16 H161 CHD sing 81 n n 
C16 H162 CHD sing 82 n n 
C17 C20 CHD sing 83 n n 
C17 H17 CHD sing 84 n n 
C18 H181 CHD sing 85 n n 
C18 H182 CHD sing 86 n n 
C18 H183 CHD sing 87 n n 
C19 H191 CHD sing 88 n n 
C19 H192 CHD sing 89 n n 
C19 H193 CHD sing 90 n n 
C20 C21 CHD sing 91 n n 
C20 C22 CHD sing 92 n n 
C20 H20 CHD sing 93 n n 
C21 H211 CHD sing 94 n n 
C21 H212 CHD sing 95 n n 
C21 H213 CHD sing 96 n n 
C22 C23 CHD sing 97 n n 
C22 H221 CHD sing 98 n n 
C22 H222 CHD sing 99 n n 
C23 C24 CHD sing 100 n n 
C23 H231 CHD sing 101 n n 
C23 H232 CHD sing 102 n n 
O25 C24 CHD doub 103 n n 
C24 O26 CHD sing 104 n n 
O26 H26 CHD sing 105 n n 
#
_atom_sites.entry_id                     1ON5 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 CHD A 1 1 1 CHD CHD . 
D 2 CHD B 1 1 1 CHD CHD . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 CHD . . . C 2 -10.62 -2.749 -9.581 1 0 ? C1 CHD 1 A 1 
HETATM 2 C C2 CHD . . . C 2 -11.272 -2.458 -10.932 1 0 ? C2 CHD 1 A 1 
HETATM 3 C C3 CHD . . . C 2 -10.299 -2.812 -12.05 1 0 ? C3 CHD 1 A 1 
HETATM 4 O O3 CHD . . . C 2 -10.864 -2.514 -13.342 1 0 ? O3 CHD 1 A 1 
HETATM 5 C C4 CHD . . . C 2 -9.024 -2.007 -11.895 1 0 ? C4 CHD 1 A 1 
HETATM 6 C C5 CHD . . . C 2 -8.35 -2.219 -10.528 1 0 ? C5 CHD 1 A 1 
HETATM 7 C C6 CHD . . . C 2 -7.047 -1.412 -10.407 1 0 ? C6 CHD 1 A 1 
HETATM 8 C C7 CHD . . . C 2 -7.227 0.082 -10.131 1 0 ? C7 CHD 1 A 1 
HETATM 9 O O7 CHD . . . C 2 -7.592 0.765 -11.346 1 0 ? O7 CHD 1 A 1 
HETATM 10 C C8 CHD . . . C 2 -8.229 0.336 -8.989 1 0 ? C8 CHD 1 A 1 
HETATM 11 C C9 CHD . . . C 2 -9.556 -0.42 -9.202 1 0 ? C9 CHD 1 A 1 
HETATM 12 C C10 CHD . . . C 2 -9.312 -1.966 -9.319 1 0 ? C10 CHD 1 A 1 
HETATM 13 C C11 CHD . . . C 2 -10.593 -0.067 -8.107 1 0 ? C11 CHD 1 A 1 
HETATM 14 C C12 CHD . . . C 2 -10.793 1.45 -7.862 1 0 ? C12 CHD 1 A 1 
HETATM 15 O O12 CHD . . . C 2 -11.429 2.06 -8.999 1 0 ? O12 CHD 1 A 1 
HETATM 16 C C13 CHD . . . C 2 -9.444 2.14 -7.595 1 0 ? C13 CHD 1 A 1 
HETATM 17 C C14 CHD . . . C 2 -8.493 1.825 -8.778 1 0 ? C14 CHD 1 A 1 
HETATM 18 C C15 CHD . . . C 2 -7.28 2.731 -8.54 1 0 ? C15 CHD 1 A 1 
HETATM 19 C C16 CHD . . . C 2 -7.862 3.982 -7.833 1 0 ? C16 CHD 1 A 1 
HETATM 20 C C17 CHD . . . C 2 -9.395 3.711 -7.625 1 0 ? C17 CHD 1 A 1 
HETATM 21 C C18 CHD . . . C 2 -8.913 1.622 -6.248 1 0 ? C18 CHD 1 A 1 
HETATM 22 C C19 CHD . . . C 2 -8.703 -2.547 -8.041 1 0 ? C19 CHD 1 A 1 
HETATM 23 C C20 CHD . . . C 2 -9.966 4.495 -6.413 1 0 ? C20 CHD 1 A 1 
HETATM 24 C C21 CHD . . . C 2 -11.452 4.234 -6.219 1 0 ? C21 CHD 1 A 1 
HETATM 25 C C22 CHD . . . C 2 -9.681 6.005 -6.56 1 0 ? C22 CHD 1 A 1 
HETATM 26 C C23 CHD . . . C 2 -10.548 6.882 -5.647 1 0 ? C23 CHD 1 A 1 
HETATM 27 O O25 CHD . . . C 2 -9.285 6.967 -3.633 1 0 ? O25 CHD 1 A 1 
HETATM 28 C C24 CHD . . . C 2 -10.261 6.617 -4.185 1 0 ? C24 CHD 1 A 1 
HETATM 29 H H11 CHD . . . C 2 -10.35 -3.789 -9.546 1 0 ? H11 CHD 1 A 1 
HETATM 30 H H12A CHD . . . C 2 -11.343 -2.559 -8.803 1 0 ? H12A CHD 1 A 1 
HETATM 31 H H21 CHD . . . C 2 -11.578 -1.427 -10.979 1 0 ? H21 CHD 1 A 1 
HETATM 32 H H22 CHD . . . C 2 -12.176 -3.027 -11.07 1 0 ? H22 CHD 1 A 1 
HETATM 33 H H3 CHD . . . C 2 -10.121 -3.874 -12.004 1 0 ? H3 CHD 1 A 1 
HETATM 34 H HO3 CHD . . . C 2 -10.36 -2.892 -13.982 1 0 ? HO3 CHD 1 A 1 
HETATM 35 H H41 CHD . . . C 2 -9.244 -0.968 -12.083 1 0 ? H41 CHD 1 A 1 
HETATM 36 H H42 CHD . . . C 2 -8.313 -2.271 -12.659 1 0 ? H42 CHD 1 A 1 
HETATM 37 H H5 CHD . . . C 2 -8.074 -3.257 -10.441 1 0 ? H5 CHD 1 A 1 
HETATM 38 H H61 CHD . . . C 2 -6.473 -1.63 -11.291 1 0 ? H61 CHD 1 A 1 
HETATM 39 H H62 CHD . . . C 2 -6.442 -1.816 -9.617 1 0 ? H62 CHD 1 A 1 
HETATM 40 H H7 CHD . . . C 2 -6.282 0.485 -9.807 1 0 ? H7 CHD 1 A 1 
HETATM 41 H HO7 CHD . . . C 2 -8.372 0.631 -11.74 1 0 ? HO7 CHD 1 A 1 
HETATM 42 H H8 CHD . . . C 2 -7.784 -0.007 -8.068 1 0 ? H8 CHD 1 A 1 
HETATM 43 H H9 CHD . . . C 2 -10.031 -0.114 -10.119 1 0 ? H9 CHD 1 A 1 
HETATM 44 H H111 CHD . . . C 2 -10.27 -0.546 -7.198 1 0 ? H111 CHD 1 A 1 
HETATM 45 H H112 CHD . . . C 2 -11.568 -0.434 -8.375 1 0 ? H112 CHD 1 A 1 
HETATM 46 H H12 CHD . . . C 2 -11.437 1.622 -7.011 1 0 ? H12 CHD 1 A 1 
HETATM 47 H HO12 CHD . . . C 2 -11.472 2.977 -8.901 1 0 ? HO12 CHD 1 A 1 
HETATM 48 H H14 CHD . . . C 2 -8.95 2.186 -9.684 1 0 ? H14 CHD 1 A 1 
HETATM 49 H H151 CHD . . . C 2 -6.754 2.988 -9.444 1 0 ? H151 CHD 1 A 1 
HETATM 50 H H152 CHD . . . C 2 -6.509 2.222 -7.986 1 0 ? H152 CHD 1 A 1 
HETATM 51 H H161 CHD . . . C 2 -7.713 4.869 -8.424 1 0 ? H161 CHD 1 A 1 
HETATM 52 H H162 CHD . . . C 2 -7.398 4.144 -6.873 1 0 ? H162 CHD 1 A 1 
HETATM 53 H H17 CHD . . . C 2 -9.982 4.021 -8.474 1 0 ? H17 CHD 1 A 1 
HETATM 54 H H181 CHD . . . C 2 -9.391 2.151 -5.436 1 0 ? H181 CHD 1 A 1 
HETATM 55 H H182 CHD . . . C 2 -7.848 1.781 -6.171 1 0 ? H182 CHD 1 A 1 
HETATM 56 H H183 CHD . . . C 2 -9.117 0.569 -6.127 1 0 ? H183 CHD 1 A 1 
HETATM 57 H H191 CHD . . . C 2 -8.017 -3.358 -8.239 1 0 ? H191 CHD 1 A 1 
HETATM 58 H H192 CHD . . . C 2 -9.454 -2.98 -7.397 1 0 ? H192 CHD 1 A 1 
HETATM 59 H H193 CHD . . . C 2 -8.206 -1.759 -7.495 1 0 ? H193 CHD 1 A 1 
HETATM 60 H H20 CHD . . . C 2 -9.447 4.191 -5.516 1 0 ? H20 CHD 1 A 1 
HETATM 61 H H211 CHD . . . C 2 -11.837 3.439 -6.84 1 0 ? H211 CHD 1 A 1 
HETATM 62 H H212 CHD . . . C 2 -12.079 5.099 -6.373 1 0 ? H212 CHD 1 A 1 
HETATM 63 H H213 CHD . . . C 2 -11.647 3.959 -5.193 1 0 ? H213 CHD 1 A 1 
HETATM 64 H H221 CHD . . . C 2 -9.776 6.353 -7.575 1 0 ? H221 CHD 1 A 1 
HETATM 65 H H222 CHD . . . C 2 -8.62 6.15 -6.434 1 0 ? H222 CHD 1 A 1 
HETATM 66 H H231 CHD . . . C 2 -11.584 6.651 -5.832 1 0 ? H231 CHD 1 A 1 
HETATM 67 H H232 CHD . . . C 2 -10.365 7.927 -5.835 1 0 ? H232 CHD 1 A 1 
#
_model_server_stats.io_time_ms              64 
_model_server_stats.parse_time_ms           4 
_model_server_stats.create_model_time_ms    1 
_model_server_stats.query_time_ms           274 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           67 
#