data_1OO5
#
_model_server_result.job_id            khhpSbo2GM4jd-nljaKQ8w 
_model_server_result.datetime_utc      '2024-11-07 21:51:48' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1oo5 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":218}' 
#
_entry.id    1OO5 
#
_exptl.entry_id    1OO5 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              456.344 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN MONONUCLEOTIDE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1OO5 
_cell.length_a            56.97 
_cell.length_b            56.97 
_cell.length_c            265.65 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1OO5 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        92 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 41 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C17 H21 N4 O9 P' 
_chem_comp.formula_weight    456.344 
_chem_comp.id                FMN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN MONONUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'RIBOFLAVIN MONOPHOSPHATE' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C2 FMN sing 83 n n 
N1 C10 FMN doub 84 n n 
C2 O2 FMN doub 85 n n 
C2 N3 FMN sing 86 n n 
N3 C4 FMN sing 87 n n 
N3 HN3 FMN sing 88 n n 
C4 O4 FMN doub 89 n n 
C4 C4A FMN sing 90 n n 
C4A N5 FMN doub 91 n n 
C4A C10 FMN sing 92 n n 
N5 C5A FMN sing 93 n n 
C5A C6 FMN doub 94 n y 
C5A C9A FMN sing 95 n y 
C6 C7 FMN sing 96 n y 
C6 H6 FMN sing 97 n n 
C7 C7M FMN sing 98 n n 
C7 C8 FMN doub 99 n y 
C7M HM71 FMN sing 100 n n 
C7M HM72 FMN sing 101 n n 
C7M HM73 FMN sing 102 n n 
C8 C8M FMN sing 103 n n 
C8 C9 FMN sing 104 n y 
C8M HM81 FMN sing 105 n n 
C8M HM82 FMN sing 106 n n 
C8M HM83 FMN sing 107 n n 
C9 C9A FMN doub 108 n y 
C9 H9 FMN sing 109 n n 
C9A N10 FMN sing 110 n n 
N10 C10 FMN sing 111 n n 
N10 C1' FMN sing 112 n n 
C1' C2' FMN sing 113 n n 
C1' "H1'1" FMN sing 114 n n 
C1' "H1'2" FMN sing 115 n n 
C2' O2' FMN sing 116 n n 
C2' C3' FMN sing 117 n n 
C2' H2' FMN sing 118 n n 
O2' HO2' FMN sing 119 n n 
C3' O3' FMN sing 120 n n 
C3' C4' FMN sing 121 n n 
C3' H3' FMN sing 122 n n 
O3' HO3' FMN sing 123 n n 
C4' O4' FMN sing 124 n n 
C4' C5' FMN sing 125 n n 
C4' H4' FMN sing 126 n n 
O4' HO4' FMN sing 127 n n 
C5' O5' FMN sing 128 n n 
C5' "H5'1" FMN sing 129 n n 
C5' "H5'2" FMN sing 130 n n 
O5' P FMN sing 131 n n 
P O1P FMN doub 132 n n 
P O2P FMN sing 133 n n 
P O3P FMN sing 134 n n 
O2P HOP2 FMN sing 135 n n 
O3P HOP3 FMN sing 136 n n 
#
_atom_sites.entry_id                     1OO5 
_atom_sites.fract_transf_matrix[1][1]    0.017553 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.017553 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003764 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 FMN A 1 218 218 FMN FMN . 
D 2 FMN B 1 219 218 FMN FMN . 
E 3 HOH A 1 219 1 HOH TIP . 
E 3 HOH A 2 220 2 HOH TIP . 
E 3 HOH A 3 221 6 HOH TIP . 
E 3 HOH A 4 222 8 HOH TIP . 
E 3 HOH A 5 223 9 HOH TIP . 
E 3 HOH A 6 224 11 HOH TIP . 
E 3 HOH A 7 225 12 HOH TIP . 
E 3 HOH A 8 226 14 HOH TIP . 
E 3 HOH A 9 227 16 HOH TIP . 
E 3 HOH A 10 228 19 HOH TIP . 
E 3 HOH A 11 229 23 HOH TIP . 
E 3 HOH A 12 230 28 HOH TIP . 
E 3 HOH A 13 231 34 HOH TIP . 
E 3 HOH A 14 232 35 HOH TIP . 
E 3 HOH A 15 233 36 HOH TIP . 
E 3 HOH A 16 234 37 HOH TIP . 
E 3 HOH A 17 235 39 HOH TIP . 
E 3 HOH A 18 236 40 HOH TIP . 
E 3 HOH A 19 237 43 HOH TIP . 
E 3 HOH A 20 238 45 HOH TIP . 
E 3 HOH A 21 239 51 HOH TIP . 
E 3 HOH A 22 240 53 HOH TIP . 
E 3 HOH A 23 241 59 HOH TIP . 
E 3 HOH A 24 242 60 HOH TIP . 
E 3 HOH A 25 243 70 HOH TIP . 
E 3 HOH A 26 244 72 HOH TIP . 
E 3 HOH A 27 245 81 HOH TIP . 
E 3 HOH A 28 246 83 HOH TIP . 
E 3 HOH A 29 247 85 HOH TIP . 
E 3 HOH A 30 248 87 HOH TIP . 
E 3 HOH A 31 249 88 HOH TIP . 
E 3 HOH A 32 250 89 HOH TIP . 
E 3 HOH A 33 251 91 HOH TIP . 
E 3 HOH A 34 252 94 HOH TIP . 
E 3 HOH A 35 253 95 HOH TIP . 
E 3 HOH A 36 254 96 HOH TIP . 
F 3 HOH B 1 220 3 HOH TIP . 
F 3 HOH B 2 221 4 HOH TIP . 
F 3 HOH B 3 222 5 HOH TIP . 
F 3 HOH B 4 223 7 HOH TIP . 
F 3 HOH B 5 224 15 HOH TIP . 
F 3 HOH B 6 225 17 HOH TIP . 
F 3 HOH B 7 226 18 HOH TIP . 
F 3 HOH B 8 227 20 HOH TIP . 
F 3 HOH B 9 228 22 HOH TIP . 
F 3 HOH B 10 229 24 HOH TIP . 
F 3 HOH B 11 230 29 HOH TIP . 
F 3 HOH B 12 231 30 HOH TIP . 
F 3 HOH B 13 232 31 HOH TIP . 
F 3 HOH B 14 233 32 HOH TIP . 
F 3 HOH B 15 234 38 HOH TIP . 
F 3 HOH B 16 235 41 HOH TIP . 
F 3 HOH B 17 236 42 HOH TIP . 
F 3 HOH B 18 237 44 HOH TIP . 
F 3 HOH B 19 238 56 HOH TIP . 
F 3 HOH B 20 239 62 HOH TIP . 
F 3 HOH B 21 240 68 HOH TIP . 
F 3 HOH B 22 241 73 HOH TIP . 
F 3 HOH B 23 242 82 HOH TIP . 
F 3 HOH B 24 243 84 HOH TIP . 
F 3 HOH B 25 244 90 HOH TIP . 
F 3 HOH B 26 245 92 HOH TIP . 
F 3 HOH B 27 246 93 HOH TIP . 
F 3 HOH B 28 247 97 HOH TIP . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 FMN . . . C 2 20.095 -32.711 50.209 1 33.22 ? N1 FMN 218 A 1 
HETATM 2 C C2 FMN . . . C 2 21.372 -32.433 50.573 1 32.32 ? C2 FMN 218 A 1 
HETATM 3 O O2 FMN . . . C 2 22.34 -32.892 50.016 1 31.68 ? O2 FMN 218 A 1 
HETATM 4 N N3 FMN . . . C 2 21.606 -31.553 51.681 1 33.91 ? N3 FMN 218 A 1 
HETATM 5 C C4 FMN . . . C 2 20.637 -30.974 52.431 1 33.64 ? C4 FMN 218 A 1 
HETATM 6 O O4 FMN . . . C 2 20.923 -30.236 53.39 1 33.56 ? O4 FMN 218 A 1 
HETATM 7 C C4A FMN . . . C 2 19.267 -31.277 52.028 1 32.73 ? C4A FMN 218 A 1 
HETATM 8 N N5 FMN . . . C 2 18.245 -30.718 52.65 1 31.6 ? N5 FMN 218 A 1 
HETATM 9 C C5A FMN . . . C 2 17.05 -30.748 52.028 1 31.29 ? C5A FMN 218 A 1 
HETATM 10 C C6 FMN . . . C 2 15.991 -29.859 52.449 1 29.94 ? C6 FMN 218 A 1 
HETATM 11 C C7 FMN . . . C 2 14.786 -29.811 51.862 1 28.82 ? C7 FMN 218 A 1 
HETATM 12 C C7M FMN . . . C 2 13.666 -28.896 52.322 1 24.48 ? C7M FMN 218 A 1 
HETATM 13 C C8 FMN . . . C 2 14.518 -30.667 50.716 1 30.02 ? C8 FMN 218 A 1 
HETATM 14 C C8M FMN . . . C 2 13.197 -30.596 49.997 1 30.29 ? C8M FMN 218 A 1 
HETATM 15 C C9 FMN . . . C 2 15.507 -31.537 50.312 1 31.81 ? C9 FMN 218 A 1 
HETATM 16 C C9A FMN . . . C 2 16.757 -31.605 50.921 1 31.99 ? C9A FMN 218 A 1 
HETATM 17 N N10 FMN . . . C 2 17.8 -32.429 50.499 1 32.36 ? N10 FMN 218 A 1 
HETATM 18 C C10 FMN . . . C 2 19.084 -32.174 50.876 1 32.64 ? C10 FMN 218 A 1 
HETATM 19 C C1' FMN . . . C 2 17.602 -33.223 49.296 1 32.21 ? C1' FMN 218 A 1 
HETATM 20 C C2' FMN . . . C 2 16.729 -34.415 49.589 1 31.96 ? C2' FMN 218 A 1 
HETATM 21 O O2' FMN . . . C 2 17.482 -35.516 50.115 1 32.4 ? O2' FMN 218 A 1 
HETATM 22 C C3' FMN . . . C 2 16.027 -34.855 48.281 1 30.46 ? C3' FMN 218 A 1 
HETATM 23 O O3' FMN . . . C 2 15.163 -33.761 47.855 1 31.63 ? O3' FMN 218 A 1 
HETATM 24 C C4' FMN . . . C 2 15.181 -36.106 48.402 1 29.06 ? C4' FMN 218 A 1 
HETATM 25 O O4' FMN . . . C 2 16.016 -37.243 48.737 1 26.15 ? O4' FMN 218 A 1 
HETATM 26 C C5' FMN . . . C 2 14.437 -36.452 47.143 1 27.67 ? C5' FMN 218 A 1 
HETATM 27 O O5' FMN . . . C 2 15.402 -36.683 46.082 1 29.88 ? O5' FMN 218 A 1 
HETATM 28 P P FMN . . . C 2 15.353 -35.918 44.698 1 27.56 ? P FMN 218 A 1 
HETATM 29 O O1P FMN . . . C 2 16.476 -36.464 43.865 1 31.79 ? O1P FMN 218 A 1 
HETATM 30 O O2P FMN . . . C 2 15.435 -34.45 44.968 1 30.39 ? O2P FMN 218 A 1 
HETATM 31 O O3P FMN . . . C 2 13.977 -36.337 44.071 1 28.88 ? O3P FMN 218 A 1 
#
_model_server_stats.io_time_ms              61 
_model_server_stats.parse_time_ms           5 
_model_server_stats.create_model_time_ms    22 
_model_server_stats.query_time_ms           225 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           31 
#