data_1OPJ # _model_server_result.job_id DkG5HlQBk6Za9KOFIK8FaQ _model_server_result.datetime_utc '2024-11-26 23:11:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1opj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":2}' # _entry.id 1OPJ # _exptl.entry_id 1OPJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 228.371 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MYRISTIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 67.91 _cell.angle_beta 79.76 _cell.angle_gamma 84.88 _cell.entry_id 1OPJ _cell.length_a 41.844 _cell.length_b 63.507 _cell.length_c 64.051 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1OPJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,I 1 1 B,F,G,H,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 G N N # _chem_comp.formula 'C14 H28 O2' _chem_comp.formula_weight 228.371 _chem_comp.id MYR _chem_comp.mon_nstd_flag . _chem_comp.name 'MYRISTIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 MYR doub 237 n n C1 O2 MYR sing 238 n n C1 C2 MYR sing 239 n n O2 HO2 MYR sing 240 n n C2 C3 MYR sing 241 n n C2 H21 MYR sing 242 n n C2 H22 MYR sing 243 n n C3 C4 MYR sing 244 n n C3 H31 MYR sing 245 n n C3 H32 MYR sing 246 n n C4 C5 MYR sing 247 n n C4 H41 MYR sing 248 n n C4 H42 MYR sing 249 n n C5 C6 MYR sing 250 n n C5 H51 MYR sing 251 n n C5 H52 MYR sing 252 n n C6 C7 MYR sing 253 n n C6 H61 MYR sing 254 n n C6 H62 MYR sing 255 n n C7 C8 MYR sing 256 n n C7 H71 MYR sing 257 n n C7 H72 MYR sing 258 n n C8 C9 MYR sing 259 n n C8 H81 MYR sing 260 n n C8 H82 MYR sing 261 n n C9 C10 MYR sing 262 n n C9 H91 MYR sing 263 n n C9 H92 MYR sing 264 n n C10 C11 MYR sing 265 n n C10 H101 MYR sing 266 n n C10 H102 MYR sing 267 n n C11 C12 MYR sing 268 n n C11 H111 MYR sing 269 n n C11 H112 MYR sing 270 n n C12 C13 MYR sing 271 n n C12 H121 MYR sing 272 n n C12 H122 MYR sing 273 n n C13 C14 MYR sing 274 n n C13 H131 MYR sing 275 n n C13 H132 MYR sing 276 n n C14 H141 MYR sing 277 n n C14 H142 MYR sing 278 n n C14 H143 MYR sing 279 n n # _atom_sites.entry_id 1OPJ _atom_sites.fract_transf_matrix[1][1] 0.023898 _atom_sites.fract_transf_matrix[1][2] -0.002142 _atom_sites.fract_transf_matrix[1][3] -0.003795 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015809 _atom_sites.fract_transf_matrix[2][3] -0.006247 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017059 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CL A 1 5 5 CL CL . D 3 MYR A 1 1 1 MYR MYR . E 4 STI A 1 3 3 STI STI . F 2 CL B 1 6 6 CL CL . G 3 MYR B 1 2 2 MYR MYR . H 4 STI B 1 4 4 STI STI . I 5 HOH A 1 7 7 HOH HOH . I 5 HOH A 2 10 10 HOH HOH . I 5 HOH A 3 11 11 HOH HOH . I 5 HOH A 4 13 13 HOH HOH . I 5 HOH A 5 14 14 HOH HOH . I 5 HOH A 6 15 15 HOH HOH . I 5 HOH A 7 17 17 HOH HOH . I 5 HOH A 8 21 21 HOH HOH . I 5 HOH A 9 22 22 HOH HOH . I 5 HOH A 10 23 23 HOH HOH . I 5 HOH A 11 24 24 HOH HOH . I 5 HOH A 12 25 25 HOH HOH . I 5 HOH A 13 27 27 HOH HOH . I 5 HOH A 14 29 29 HOH HOH . I 5 HOH A 15 32 32 HOH HOH . I 5 HOH A 16 33 33 HOH HOH . I 5 HOH A 17 34 34 HOH HOH . I 5 HOH A 18 37 37 HOH HOH . I 5 HOH A 19 40 40 HOH HOH . I 5 HOH A 20 44 44 HOH HOH . I 5 HOH A 21 46 46 HOH HOH . I 5 HOH A 22 48 48 HOH HOH . I 5 HOH A 23 49 49 HOH HOH . I 5 HOH A 24 50 50 HOH HOH . I 5 HOH A 25 54 54 HOH HOH . I 5 HOH A 26 60 60 HOH HOH . I 5 HOH A 27 61 61 HOH HOH . I 5 HOH A 28 62 62 HOH HOH . I 5 HOH A 29 63 63 HOH HOH . I 5 HOH A 30 64 64 HOH HOH . I 5 HOH A 31 68 68 HOH HOH . I 5 HOH A 32 70 70 HOH HOH . I 5 HOH A 33 71 71 HOH HOH . I 5 HOH A 34 73 73 HOH HOH . I 5 HOH A 35 74 74 HOH HOH . I 5 HOH A 36 75 75 HOH HOH . I 5 HOH A 37 76 76 HOH HOH . I 5 HOH A 38 77 77 HOH HOH . I 5 HOH A 39 79 79 HOH HOH . I 5 HOH A 40 81 81 HOH HOH . I 5 HOH A 41 83 83 HOH HOH . I 5 HOH A 42 86 86 HOH HOH . I 5 HOH A 43 90 90 HOH HOH . I 5 HOH A 44 91 91 HOH HOH . I 5 HOH A 45 92 92 HOH HOH . I 5 HOH A 46 93 93 HOH HOH . I 5 HOH A 47 94 94 HOH HOH . I 5 HOH A 48 95 95 HOH HOH . I 5 HOH A 49 98 98 HOH HOH . I 5 HOH A 50 99 99 HOH HOH . I 5 HOH A 51 101 101 HOH HOH . I 5 HOH A 52 102 102 HOH HOH . I 5 HOH A 53 104 104 HOH HOH . I 5 HOH A 54 105 105 HOH HOH . I 5 HOH A 55 106 106 HOH HOH . I 5 HOH A 56 109 109 HOH HOH . I 5 HOH A 57 112 112 HOH HOH . I 5 HOH A 58 113 113 HOH HOH . I 5 HOH A 59 115 115 HOH HOH . I 5 HOH A 60 116 116 HOH HOH . I 5 HOH A 61 121 121 HOH HOH . I 5 HOH A 62 124 124 HOH HOH . I 5 HOH A 63 125 125 HOH HOH . I 5 HOH A 64 127 127 HOH HOH . I 5 HOH A 65 132 132 HOH HOH . I 5 HOH A 66 134 134 HOH HOH . I 5 HOH A 67 141 141 HOH HOH . I 5 HOH A 68 142 142 HOH HOH . I 5 HOH A 69 143 143 HOH HOH . I 5 HOH A 70 144 144 HOH HOH . I 5 HOH A 71 145 145 HOH HOH . I 5 HOH A 72 146 146 HOH HOH . I 5 HOH A 73 148 148 HOH HOH . I 5 HOH A 74 151 151 HOH HOH . I 5 HOH A 75 152 152 HOH HOH . I 5 HOH A 76 154 154 HOH HOH . I 5 HOH A 77 155 155 HOH HOH . I 5 HOH A 78 158 158 HOH HOH . I 5 HOH A 79 160 160 HOH HOH . I 5 HOH A 80 161 161 HOH HOH . I 5 HOH A 81 163 163 HOH HOH . I 5 HOH A 82 164 164 HOH HOH . I 5 HOH A 83 165 165 HOH HOH . I 5 HOH A 84 166 166 HOH HOH . I 5 HOH A 85 169 169 HOH HOH . I 5 HOH A 86 171 171 HOH HOH . I 5 HOH A 87 175 175 HOH HOH . I 5 HOH A 88 176 176 HOH HOH . I 5 HOH A 89 177 177 HOH HOH . I 5 HOH A 90 178 178 HOH HOH . I 5 HOH A 91 179 179 HOH HOH . I 5 HOH A 92 181 181 HOH HOH . I 5 HOH A 93 182 182 HOH HOH . I 5 HOH A 94 184 184 HOH HOH . I 5 HOH A 95 185 185 HOH HOH . I 5 HOH A 96 186 186 HOH HOH . I 5 HOH A 97 187 187 HOH HOH . I 5 HOH A 98 188 188 HOH HOH . I 5 HOH A 99 189 189 HOH HOH . I 5 HOH A 100 190 190 HOH HOH . I 5 HOH A 101 191 191 HOH HOH . I 5 HOH A 102 194 194 HOH HOH . I 5 HOH A 103 195 195 HOH HOH . I 5 HOH A 104 199 199 HOH HOH . I 5 HOH A 105 203 203 HOH HOH . I 5 HOH A 106 204 204 HOH HOH . I 5 HOH A 107 205 205 HOH HOH . I 5 HOH A 108 208 208 HOH HOH . I 5 HOH A 109 209 209 HOH HOH . I 5 HOH A 110 210 210 HOH HOH . I 5 HOH A 111 211 211 HOH HOH . I 5 HOH A 112 212 212 HOH HOH . I 5 HOH A 113 213 213 HOH HOH . I 5 HOH A 114 214 214 HOH HOH . I 5 HOH A 115 215 215 HOH HOH . I 5 HOH A 116 221 221 HOH HOH . I 5 HOH A 117 223 223 HOH HOH . I 5 HOH A 118 225 225 HOH HOH . I 5 HOH A 119 226 226 HOH HOH . I 5 HOH A 120 227 227 HOH HOH . I 5 HOH A 121 230 230 HOH HOH . I 5 HOH A 122 232 232 HOH HOH . I 5 HOH A 123 233 233 HOH HOH . I 5 HOH A 124 234 234 HOH HOH . I 5 HOH A 125 235 235 HOH HOH . I 5 HOH A 126 236 236 HOH HOH . I 5 HOH A 127 237 237 HOH HOH . J 5 HOH B 1 8 8 HOH HOH . J 5 HOH B 2 9 9 HOH HOH . J 5 HOH B 3 12 12 HOH HOH . J 5 HOH B 4 16 16 HOH HOH . J 5 HOH B 5 18 18 HOH HOH . J 5 HOH B 6 19 19 HOH HOH . J 5 HOH B 7 20 20 HOH HOH . J 5 HOH B 8 26 26 HOH HOH . J 5 HOH B 9 28 28 HOH HOH . J 5 HOH B 10 30 30 HOH HOH . J 5 HOH B 11 31 31 HOH HOH . J 5 HOH B 12 35 35 HOH HOH . J 5 HOH B 13 36 36 HOH HOH . J 5 HOH B 14 38 38 HOH HOH . J 5 HOH B 15 39 39 HOH HOH . J 5 HOH B 16 41 41 HOH HOH . J 5 HOH B 17 42 42 HOH HOH . J 5 HOH B 18 43 43 HOH HOH . J 5 HOH B 19 45 45 HOH HOH . J 5 HOH B 20 47 47 HOH HOH . J 5 HOH B 21 51 51 HOH HOH . J 5 HOH B 22 52 52 HOH HOH . J 5 HOH B 23 53 53 HOH HOH . J 5 HOH B 24 55 55 HOH HOH . J 5 HOH B 25 56 56 HOH HOH . J 5 HOH B 26 57 57 HOH HOH . J 5 HOH B 27 58 58 HOH HOH . J 5 HOH B 28 59 59 HOH HOH . J 5 HOH B 29 65 65 HOH HOH . J 5 HOH B 30 66 66 HOH HOH . J 5 HOH B 31 67 67 HOH HOH . J 5 HOH B 32 69 69 HOH HOH . J 5 HOH B 33 72 72 HOH HOH . J 5 HOH B 34 78 78 HOH HOH . J 5 HOH B 35 80 80 HOH HOH . J 5 HOH B 36 82 82 HOH HOH . J 5 HOH B 37 84 84 HOH HOH . J 5 HOH B 38 85 85 HOH HOH . J 5 HOH B 39 87 87 HOH HOH . J 5 HOH B 40 88 88 HOH HOH . J 5 HOH B 41 89 89 HOH HOH . J 5 HOH B 42 96 96 HOH HOH . J 5 HOH B 43 97 97 HOH HOH . J 5 HOH B 44 100 100 HOH HOH . J 5 HOH B 45 103 103 HOH HOH . J 5 HOH B 46 107 107 HOH HOH . J 5 HOH B 47 108 108 HOH HOH . J 5 HOH B 48 110 110 HOH HOH . J 5 HOH B 49 111 111 HOH HOH . J 5 HOH B 50 114 114 HOH HOH . J 5 HOH B 51 117 117 HOH HOH . J 5 HOH B 52 118 118 HOH HOH . J 5 HOH B 53 119 119 HOH HOH . J 5 HOH B 54 120 120 HOH HOH . J 5 HOH B 55 122 122 HOH HOH . J 5 HOH B 56 123 123 HOH HOH . J 5 HOH B 57 126 126 HOH HOH . J 5 HOH B 58 128 128 HOH HOH . J 5 HOH B 59 129 129 HOH HOH . J 5 HOH B 60 130 130 HOH HOH . J 5 HOH B 61 131 131 HOH HOH . J 5 HOH B 62 133 133 HOH HOH . J 5 HOH B 63 135 135 HOH HOH . J 5 HOH B 64 136 136 HOH HOH . J 5 HOH B 65 137 137 HOH HOH . J 5 HOH B 66 138 138 HOH HOH . J 5 HOH B 67 139 139 HOH HOH . J 5 HOH B 68 140 140 HOH HOH . J 5 HOH B 69 147 147 HOH HOH . J 5 HOH B 70 149 149 HOH HOH . J 5 HOH B 71 150 150 HOH HOH . J 5 HOH B 72 153 153 HOH HOH . J 5 HOH B 73 156 156 HOH HOH . J 5 HOH B 74 157 157 HOH HOH . J 5 HOH B 75 159 159 HOH HOH . J 5 HOH B 76 162 162 HOH HOH . J 5 HOH B 77 167 167 HOH HOH . J 5 HOH B 78 168 168 HOH HOH . J 5 HOH B 79 170 170 HOH HOH . J 5 HOH B 80 172 172 HOH HOH . J 5 HOH B 81 173 173 HOH HOH . J 5 HOH B 82 174 174 HOH HOH . J 5 HOH B 83 180 180 HOH HOH . J 5 HOH B 84 183 183 HOH HOH . J 5 HOH B 85 192 192 HOH HOH . J 5 HOH B 86 193 193 HOH HOH . J 5 HOH B 87 196 196 HOH HOH . J 5 HOH B 88 197 197 HOH HOH . J 5 HOH B 89 198 198 HOH HOH . J 5 HOH B 90 200 200 HOH HOH . J 5 HOH B 91 201 201 HOH HOH . J 5 HOH B 92 202 202 HOH HOH . J 5 HOH B 93 206 206 HOH HOH . J 5 HOH B 94 207 207 HOH HOH . J 5 HOH B 95 216 216 HOH HOH . J 5 HOH B 96 217 217 HOH HOH . J 5 HOH B 97 218 218 HOH HOH . J 5 HOH B 98 219 219 HOH HOH . J 5 HOH B 99 220 220 HOH HOH . J 5 HOH B 100 222 222 HOH HOH . J 5 HOH B 101 224 224 HOH HOH . J 5 HOH B 102 228 228 HOH HOH . J 5 HOH B 103 229 229 HOH HOH . J 5 HOH B 104 231 231 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 MYR . . . G 3 29.593 18.037 28.143 1 56.75 ? C1 MYR 2 B 1 HETATM 2 O O1 MYR . . . G 3 30.266 16.894 27.674 1 56.65 ? O1 MYR 2 B 1 HETATM 3 C C2 MYR . . . G 3 28.379 18.358 27.264 1 56.33 ? C2 MYR 2 B 1 HETATM 4 C C3 MYR . . . G 3 28.168 19.863 27.055 1 56.16 ? C3 MYR 2 B 1 HETATM 5 C C4 MYR . . . G 3 26.742 20.314 27.39 1 54.77 ? C4 MYR 2 B 1 HETATM 6 C C5 MYR . . . G 3 26.243 21.475 26.515 1 53.09 ? C5 MYR 2 B 1 HETATM 7 C C6 MYR . . . G 3 24.816 21.903 26.883 1 50.57 ? C6 MYR 2 B 1 HETATM 8 C C7 MYR . . . G 3 24.189 22.881 25.891 1 49 ? C7 MYR 2 B 1 HETATM 9 C C8 MYR . . . G 3 23.866 24.235 26.517 1 46.39 ? C8 MYR 2 B 1 HETATM 10 C C9 MYR . . . G 3 22.746 24.958 25.788 1 44.55 ? C9 MYR 2 B 1 HETATM 11 C C10 MYR . . . G 3 22.416 26.296 26.412 1 42.39 ? C10 MYR 2 B 1 HETATM 12 C C11 MYR . . . G 3 22.196 27.386 25.385 1 41.29 ? C11 MYR 2 B 1 HETATM 13 C C12 MYR . . . G 3 21.075 28.324 25.788 1 39.12 ? C12 MYR 2 B 1 HETATM 14 C C13 MYR . . . G 3 21.456 29.792 25.665 1 38.57 ? C13 MYR 2 B 1 HETATM 15 C C14 MYR . . . G 3 20.233 30.688 25.473 1 37.66 ? C14 MYR 2 B 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 308 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 15 #