data_1OQN # _model_server_result.job_id M0ASGJTzB0bMxcyWa-ZOzQ _model_server_result.datetime_utc '2025-03-04 09:39:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1oqn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":1602}' # _entry.id 1OQN # _exptl.entry_id 1OQN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 420.096 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description D-MYO-INOSITOL-1,4,5-TRIPHOSPHATE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1OQN _cell.length_a 59.106 _cell.length_b 66.481 _cell.length_c 90.528 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1OQN _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 PISA tetrameric 4 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,G,I 1 1 B,D,F,H,J 2 1 A,B,C,D,E,F,G,H,I,J 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N # _chem_comp.formula 'C6 H15 O15 P3' _chem_comp.formula_weight 420.096 _chem_comp.id I3P _chem_comp.mon_nstd_flag . _chem_comp.name D-MYO-INOSITOL-1,4,5-TRIPHOSPHATE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 I3P sing 152 n n C1 C6 I3P sing 153 n n C1 O1 I3P sing 154 n n C1 H1 I3P sing 155 n n C2 C3 I3P sing 156 n n C2 O2 I3P sing 157 n n C2 H2 I3P sing 158 n n C3 C4 I3P sing 159 n n C3 O3 I3P sing 160 n n C3 H3 I3P sing 161 n n C4 C5 I3P sing 162 n n C4 O4 I3P sing 163 n n C4 H4 I3P sing 164 n n C5 C6 I3P sing 165 n n C5 O5 I3P sing 166 n n C5 H5 I3P sing 167 n n C6 O6 I3P sing 168 n n C6 H6 I3P sing 169 n n O1 P1 I3P sing 170 n n O2 HO2 I3P sing 171 n n O3 HO3 I3P sing 172 n n O4 P4 I3P sing 173 n n O5 P5 I3P sing 174 n n O6 HO6 I3P sing 175 n n P1 O11 I3P doub 176 n n P1 O12 I3P sing 177 n n P1 O13 I3P sing 178 n n O12 HO12 I3P sing 179 n n O13 HO13 I3P sing 180 n n P4 O41 I3P doub 181 n n P4 O42 I3P sing 182 n n P4 O43 I3P sing 183 n n O42 HO42 I3P sing 184 n n O43 HO43 I3P sing 185 n n P5 O51 I3P doub 186 n n P5 O52 I3P sing 187 n n P5 O53 I3P sing 188 n n O52 HO52 I3P sing 189 n n O53 HO53 I3P sing 190 n n # _atom_sites.entry_id 1OQN _atom_sites.fract_transf_matrix[1][1] 0.016919 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015042 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011046 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 I3P A 1 1601 1601 I3P I3P . F 3 I3P B 1 1602 1601 I3P I3P . G 4 HOH A 1 6001 6001 HOH TIP . G 4 HOH A 2 6002 6002 HOH TIP . G 4 HOH A 3 6008 6008 HOH TIP . G 4 HOH A 4 6011 6011 HOH TIP . G 4 HOH A 5 6012 6012 HOH TIP . G 4 HOH A 6 6017 6017 HOH TIP . G 4 HOH A 7 6019 6019 HOH TIP . G 4 HOH A 8 6020 6020 HOH TIP . G 4 HOH A 9 6022 6022 HOH TIP . G 4 HOH A 10 6025 6025 HOH TIP . G 4 HOH A 11 6026 6026 HOH TIP . G 4 HOH A 12 6029 6029 HOH TIP . G 4 HOH A 13 6031 6031 HOH TIP . G 4 HOH A 14 6034 6034 HOH TIP . G 4 HOH A 15 6040 6040 HOH TIP . G 4 HOH A 16 6041 6041 HOH TIP . G 4 HOH A 17 6046 6046 HOH TIP . G 4 HOH A 18 6056 6056 HOH TIP . G 4 HOH A 19 6059 6059 HOH TIP . G 4 HOH A 20 6063 6063 HOH TIP . G 4 HOH A 21 6064 6064 HOH TIP . G 4 HOH A 22 6067 6067 HOH TIP . G 4 HOH A 23 6068 6068 HOH TIP . G 4 HOH A 24 6069 6069 HOH TIP . G 4 HOH A 25 6070 6070 HOH TIP . G 4 HOH A 26 6072 6072 HOH TIP . G 4 HOH A 27 6073 6073 HOH TIP . G 4 HOH A 28 6078 6078 HOH TIP . G 4 HOH A 29 6079 6079 HOH TIP . G 4 HOH A 30 6080 6080 HOH TIP . G 4 HOH A 31 6081 6081 HOH TIP . G 4 HOH A 32 6082 6082 HOH TIP . G 4 HOH A 33 6083 6083 HOH TIP . G 4 HOH A 34 6084 6084 HOH TIP . G 4 HOH A 35 6091 6091 HOH TIP . G 4 HOH A 36 6093 6093 HOH TIP . G 4 HOH A 37 6095 6095 HOH TIP . G 4 HOH A 38 6098 6098 HOH TIP . G 4 HOH A 39 6099 6099 HOH TIP . G 4 HOH A 40 6100 6100 HOH TIP . G 4 HOH A 41 6102 6102 HOH TIP . G 4 HOH A 42 6104 6104 HOH TIP . G 4 HOH A 43 6105 6105 HOH TIP . G 4 HOH A 44 6108 6108 HOH TIP . G 4 HOH A 45 6109 6109 HOH TIP . G 4 HOH A 46 6111 6111 HOH TIP . G 4 HOH A 47 6116 6116 HOH TIP . G 4 HOH A 48 6118 6118 HOH TIP . G 4 HOH A 49 6120 6120 HOH TIP . G 4 HOH A 50 6121 6121 HOH TIP . G 4 HOH A 51 6124 6124 HOH TIP . G 4 HOH A 52 6131 6131 HOH TIP . G 4 HOH A 53 6133 6133 HOH TIP . G 4 HOH A 54 6137 6137 HOH TIP . G 4 HOH A 55 6140 6140 HOH TIP . G 4 HOH A 56 6143 6143 HOH TIP . G 4 HOH A 57 6146 6146 HOH TIP . G 4 HOH A 58 6150 6150 HOH TIP . G 4 HOH A 59 6155 6155 HOH TIP . G 4 HOH A 60 6157 6157 HOH TIP . G 4 HOH A 61 6158 6158 HOH TIP . G 4 HOH A 62 6165 6165 HOH TIP . G 4 HOH A 63 6166 6166 HOH TIP . G 4 HOH A 64 6167 6167 HOH TIP . G 4 HOH A 65 6168 6168 HOH TIP . G 4 HOH A 66 6170 6170 HOH TIP . G 4 HOH A 67 6172 6172 HOH TIP . G 4 HOH A 68 6173 6173 HOH TIP . G 4 HOH A 69 6174 6174 HOH TIP . G 4 HOH A 70 6176 6176 HOH TIP . G 4 HOH A 71 6180 6180 HOH TIP . G 4 HOH A 72 6181 6181 HOH TIP . G 4 HOH A 73 6184 6184 HOH TIP . G 4 HOH A 74 6190 6190 HOH TIP . G 4 HOH A 75 6191 6191 HOH TIP . G 4 HOH A 76 6192 6192 HOH TIP . G 4 HOH A 77 6195 6195 HOH TIP . G 4 HOH A 78 6198 6198 HOH TIP . G 4 HOH A 79 6199 6199 HOH TIP . G 4 HOH A 80 6200 6200 HOH TIP . G 4 HOH A 81 6201 6201 HOH TIP . G 4 HOH A 82 6206 6206 HOH TIP . G 4 HOH A 83 6208 6208 HOH TIP . G 4 HOH A 84 6209 6209 HOH TIP . G 4 HOH A 85 6210 6210 HOH TIP . G 4 HOH A 86 6211 6211 HOH TIP . G 4 HOH A 87 6212 6212 HOH TIP . G 4 HOH A 88 6213 6213 HOH TIP . G 4 HOH A 89 6215 6215 HOH TIP . G 4 HOH A 90 6216 6216 HOH TIP . G 4 HOH A 91 6218 6218 HOH TIP . G 4 HOH A 92 6219 6219 HOH TIP . G 4 HOH A 93 6220 6220 HOH TIP . G 4 HOH A 94 6221 6221 HOH TIP . G 4 HOH A 95 6233 6233 HOH TIP . G 4 HOH A 96 6234 6234 HOH TIP . G 4 HOH A 97 6235 6235 HOH TIP . G 4 HOH A 98 6236 6236 HOH TIP . G 4 HOH A 99 6237 6237 HOH TIP . H 4 HOH B 1 6003 6003 HOH TIP . H 4 HOH B 2 6004 6004 HOH TIP . H 4 HOH B 3 6005 6005 HOH TIP . H 4 HOH B 4 6006 6006 HOH TIP . H 4 HOH B 5 6010 6010 HOH TIP . H 4 HOH B 6 6013 6013 HOH TIP . H 4 HOH B 7 6014 6014 HOH TIP . H 4 HOH B 8 6016 6016 HOH TIP . H 4 HOH B 9 6018 6018 HOH TIP . H 4 HOH B 10 6021 6021 HOH TIP . H 4 HOH B 11 6023 6023 HOH TIP . H 4 HOH B 12 6024 6024 HOH TIP . H 4 HOH B 13 6027 6027 HOH TIP . H 4 HOH B 14 6028 6028 HOH TIP . H 4 HOH B 15 6030 6030 HOH TIP . H 4 HOH B 16 6032 6032 HOH TIP . H 4 HOH B 17 6033 6033 HOH TIP . H 4 HOH B 18 6035 6035 HOH TIP . H 4 HOH B 19 6036 6036 HOH TIP . H 4 HOH B 20 6042 6042 HOH TIP . H 4 HOH B 21 6043 6043 HOH TIP . H 4 HOH B 22 6044 6044 HOH TIP . H 4 HOH B 23 6045 6045 HOH TIP . H 4 HOH B 24 6047 6047 HOH TIP . H 4 HOH B 25 6048 6048 HOH TIP . H 4 HOH B 26 6049 6049 HOH TIP . H 4 HOH B 27 6051 6051 HOH TIP . H 4 HOH B 28 6052 6052 HOH TIP . H 4 HOH B 29 6053 6053 HOH TIP . H 4 HOH B 30 6054 6054 HOH TIP . H 4 HOH B 31 6055 6055 HOH TIP . H 4 HOH B 32 6057 6057 HOH TIP . H 4 HOH B 33 6060 6060 HOH TIP . H 4 HOH B 34 6062 6062 HOH TIP . H 4 HOH B 35 6066 6066 HOH TIP . H 4 HOH B 36 6074 6074 HOH TIP . H 4 HOH B 37 6075 6075 HOH TIP . H 4 HOH B 38 6076 6076 HOH TIP . H 4 HOH B 39 6077 6077 HOH TIP . H 4 HOH B 40 6087 6087 HOH TIP . H 4 HOH B 41 6088 6088 HOH TIP . H 4 HOH B 42 6090 6090 HOH TIP . H 4 HOH B 43 6092 6092 HOH TIP . H 4 HOH B 44 6094 6094 HOH TIP . H 4 HOH B 45 6101 6101 HOH TIP . H 4 HOH B 46 6103 6103 HOH TIP . H 4 HOH B 47 6106 6106 HOH TIP . H 4 HOH B 48 6107 6107 HOH TIP . H 4 HOH B 49 6110 6110 HOH TIP . H 4 HOH B 50 6113 6113 HOH TIP . H 4 HOH B 51 6114 6114 HOH TIP . H 4 HOH B 52 6115 6115 HOH TIP . H 4 HOH B 53 6117 6117 HOH TIP . H 4 HOH B 54 6122 6122 HOH TIP . H 4 HOH B 55 6123 6123 HOH TIP . H 4 HOH B 56 6126 6126 HOH TIP . H 4 HOH B 57 6127 6127 HOH TIP . H 4 HOH B 58 6129 6129 HOH TIP . H 4 HOH B 59 6130 6130 HOH TIP . H 4 HOH B 60 6132 6132 HOH TIP . H 4 HOH B 61 6134 6134 HOH TIP . H 4 HOH B 62 6135 6135 HOH TIP . H 4 HOH B 63 6136 6136 HOH TIP . H 4 HOH B 64 6138 6138 HOH TIP . H 4 HOH B 65 6139 6139 HOH TIP . H 4 HOH B 66 6141 6141 HOH TIP . H 4 HOH B 67 6142 6142 HOH TIP . H 4 HOH B 68 6144 6144 HOH TIP . H 4 HOH B 69 6147 6147 HOH TIP . H 4 HOH B 70 6151 6151 HOH TIP . H 4 HOH B 71 6153 6153 HOH TIP . H 4 HOH B 72 6154 6154 HOH TIP . H 4 HOH B 73 6161 6161 HOH TIP . H 4 HOH B 74 6163 6163 HOH TIP . H 4 HOH B 75 6164 6164 HOH TIP . H 4 HOH B 76 6175 6175 HOH TIP . H 4 HOH B 77 6177 6177 HOH TIP . H 4 HOH B 78 6178 6178 HOH TIP . H 4 HOH B 79 6182 6182 HOH TIP . H 4 HOH B 80 6183 6183 HOH TIP . H 4 HOH B 81 6185 6185 HOH TIP . H 4 HOH B 82 6186 6186 HOH TIP . H 4 HOH B 83 6187 6187 HOH TIP . H 4 HOH B 84 6188 6188 HOH TIP . H 4 HOH B 85 6189 6189 HOH TIP . H 4 HOH B 86 6194 6194 HOH TIP . H 4 HOH B 87 6196 6196 HOH TIP . H 4 HOH B 88 6197 6197 HOH TIP . H 4 HOH B 89 6203 6203 HOH TIP . H 4 HOH B 90 6207 6207 HOH TIP . H 4 HOH B 91 6214 6214 HOH TIP . H 4 HOH B 92 6217 6217 HOH TIP . H 4 HOH B 93 6222 6222 HOH TIP . H 4 HOH B 94 6223 6223 HOH TIP . H 4 HOH B 95 6224 6224 HOH TIP . H 4 HOH B 96 6225 6225 HOH TIP . H 4 HOH B 97 6226 6226 HOH TIP . H 4 HOH B 98 6227 6227 HOH TIP . H 4 HOH B 99 6228 6228 HOH TIP . H 4 HOH B 100 6229 6229 HOH TIP . H 4 HOH B 101 6230 6230 HOH TIP . H 4 HOH B 102 6231 6231 HOH TIP . I 4 HOH C 1 6007 6007 HOH TIP . I 4 HOH C 2 6038 6038 HOH TIP . I 4 HOH C 3 6050 6050 HOH TIP . I 4 HOH C 4 6089 6089 HOH TIP . I 4 HOH C 5 6193 6193 HOH TIP . I 4 HOH C 6 6204 6204 HOH TIP . J 4 HOH D 1 6015 6015 HOH TIP . J 4 HOH D 2 6037 6037 HOH TIP . J 4 HOH D 3 6071 6071 HOH TIP . J 4 HOH D 4 6086 6086 HOH TIP . J 4 HOH D 5 6096 6096 HOH TIP . J 4 HOH D 6 6097 6097 HOH TIP . J 4 HOH D 7 6145 6145 HOH TIP . J 4 HOH D 8 6162 6162 HOH TIP . J 4 HOH D 9 6179 6179 HOH TIP . J 4 HOH D 10 6232 6232 HOH TIP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 I3P . . . F 3 44.561 1.879 42.736 1 62.32 ? C1 I3P 1602 B 1 HETATM 2 C C2 I3P . . . F 3 43.237 2.636 43.022 1 59.73 ? C2 I3P 1602 B 1 HETATM 3 C C3 I3P . . . F 3 42.927 2.624 44.52 1 57.98 ? C3 I3P 1602 B 1 HETATM 4 C C4 I3P . . . F 3 44.089 3.28 45.301 1 56.75 ? C4 I3P 1602 B 1 HETATM 5 C C5 I3P . . . F 3 45.411 2.512 45.005 1 57.24 ? C5 I3P 1602 B 1 HETATM 6 C C6 I3P . . . F 3 45.742 2.536 43.495 1 59.87 ? C6 I3P 1602 B 1 HETATM 7 O O1 I3P . . . F 3 44.941 1.881 41.298 1 68.35 ? O1 I3P 1602 B 1 HETATM 8 O O2 I3P . . . F 3 43.338 3.979 42.565 1 60.26 ? O2 I3P 1602 B 1 HETATM 9 O O3 I3P . . . F 3 41.722 3.329 44.754 1 57.33 ? O3 I3P 1602 B 1 HETATM 10 O O4 I3P . . . F 3 43.737 3.256 46.76 1 54.21 ? O4 I3P 1602 B 1 HETATM 11 O O5 I3P . . . F 3 46.522 3.145 45.736 1 55.09 ? O5 I3P 1602 B 1 HETATM 12 O O6 I3P . . . F 3 46.944 1.819 43.225 1 58.53 ? O6 I3P 1602 B 1 HETATM 13 P P1 I3P . . . F 3 44.317 0.876 40.222 1 72.95 ? P1 I3P 1602 B 1 HETATM 14 O O11 I3P . . . F 3 44.946 1.214 38.912 1 73.51 ? O11 I3P 1602 B 1 HETATM 15 O O12 I3P . . . F 3 42.848 1.139 40.287 1 73.2 ? O12 I3P 1602 B 1 HETATM 16 O O13 I3P . . . F 3 44.69 -0.405 40.831 1 73.56 ? O13 I3P 1602 B 1 HETATM 17 P P4 I3P . . . F 3 43.226 4.496 47.668 1 51.55 ? P4 I3P 1602 B 1 HETATM 18 O O41 I3P . . . F 3 44.382 5.408 47.443 1 49.9 ? O41 I3P 1602 B 1 HETATM 19 O O42 I3P . . . F 3 41.987 4.926 47.024 1 51.76 ? O42 I3P 1602 B 1 HETATM 20 O O43 I3P . . . F 3 42.987 4.021 49.051 1 51.76 ? O43 I3P 1602 B 1 HETATM 21 P P5 I3P . . . F 3 47.7 2.397 46.535 1 53.26 ? P5 I3P 1602 B 1 HETATM 22 O O51 I3P . . . F 3 48.477 3.544 47.064 1 52.96 ? O51 I3P 1602 B 1 HETATM 23 O O52 I3P . . . F 3 46.947 1.577 47.523 1 54.02 ? O52 I3P 1602 B 1 HETATM 24 O O53 I3P . . . F 3 48.351 1.663 45.451 1 54.52 ? O53 I3P 1602 B 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 265 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 24 #