data_1ORP
#
_model_server_result.job_id            LYlgkJU_XaRoBkclTe37Tg 
_model_server_result.datetime_utc      '2024-10-16 10:26:17' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1orp 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":224}' 
#
_entry.id    1ORP 
#
_exptl.entry_id    1ORP 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              22.99 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SODIUM ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1ORP 
_cell.length_a            67.732 
_cell.length_b            106.516 
_cell.length_c            41.661 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1ORP 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 B O3' DA 6 C DA 17 1_555 B P PED 7 C PED 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.599 ? 
covale ? covale2 B O3' PED 7 C PED 18 1_555 B P DG 8 C DG 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.606 ? 
covale ? covale3 B C1' PED 7 C PED 18 1_555 C NZ LYS 124 A LYS 121 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.469 ? 
metalc ? metalc1 B OP1 DC 10 C DC 21 1_555 D NA NA . A NA 224 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.483 ? 
metalc ? metalc2 G O HOH . C HOH 34 1_555 D NA NA . A NA 224 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.905 ? 
metalc ? metalc3 C O MET 116 A MET 113 1_555 D NA NA . A NA 224 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? 
metalc ? metalc4 C O LEU 118 A LEU 115 1_555 D NA NA . A NA 224 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.432 ? 
metalc ? metalc5 C O VAL 121 A VAL 118 1_555 D NA NA . A NA 224 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.524 ? 
metalc ? metalc6 C SG CYS 192 A CYS 189 1_555 E FE2 SF4 . A SF4 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.617 ? 
metalc ? metalc7 C SG CYS 199 A CYS 196 1_555 E FE3 SF4 . A SF4 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.672 ? 
metalc ? metalc8 C SG CYS 202 A CYS 199 1_555 E FE1 SF4 . A SF4 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.387 ? 
metalc ? metalc9 C SG CYS 208 A CYS 205 1_555 E FE4 SF4 . A SF4 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.416 ? 
hydrog WATSON-CRICK hydrog1 A N1 DA 2 B DA 2 1_555 B N3 DT 11 C DT 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog2 A N6 DA 2 B DA 2 1_555 B O4 DT 11 C DT 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog3 A N1 DG 3 B DG 3 1_555 B N3 DC 10 C DC 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog4 A N2 DG 3 B DG 3 1_555 B O2 DC 10 C DC 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog5 A O6 DG 3 B DG 3 1_555 B N4 DC 10 C DC 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog6 A N1 DA 4 B DA 4 1_555 B N3 DT 9 C DT 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog7 A N6 DA 4 B DA 4 1_555 B O4 DT 9 C DT 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog8 A N3 DC 5 B DC 5 1_555 B N1 DG 8 C DG 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog9 A N4 DC 5 B DC 5 1_555 B O6 DG 8 C DG 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog10 A O2 DC 5 B DC 5 1_555 B N2 DG 8 C DG 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog11 A N3 DT 7 B DT 7 1_555 B N1 DA 6 C DA 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog12 A O4 DT 7 B DT 7 1_555 B N6 DA 6 C DA 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog13 A N1 DG 8 B DG 8 1_555 B N3 DC 5 C DC 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog14 A N2 DG 8 B DG 8 1_555 B O2 DC 5 C DC 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog15 A O6 DG 8 B DG 8 1_555 B N4 DC 5 C DC 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog16 A N1 DG 9 B DG 9 1_555 B N3 DC 4 C DC 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog17 A N2 DG 9 B DG 9 1_555 B O2 DC 4 C DC 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog18 A O6 DG 9 B DG 9 1_555 B N4 DC 4 C DC 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog19 A N1 DA 10 B DA 10 1_555 B N3 DT 3 C DT 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog20 A N6 DA 10 B DA 10 1_555 B O4 DT 3 C DT 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog21 A N3 DC 11 B DC 11 1_555 B N1 DG 2 C DG 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog22 A N4 DC 11 B DC 11 1_555 B O6 DG 2 C DG 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog23 A O2 DC 11 B DC 11 1_555 B N2 DG 2 C DG 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
#
_chem_comp.formula           'Na 1' 
_chem_comp.formula_weight    22.99 
_chem_comp.id                NA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SODIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     1ORP 
_atom_sites.fract_transf_matrix[1][1]    0.014764 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009388 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.024003 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 4 NA A 1 224 201 NA NA . 
E 5 SF4 A 1 300 300 SF4 FS4 . 
F 6 HOH B 1 54 54 HOH HOH . 
F 6 HOH B 2 62 62 HOH HOH . 
F 6 HOH B 3 75 75 HOH HOH . 
F 6 HOH B 4 80 80 HOH HOH . 
G 6 HOH C 1 23 7 HOH HOH . 
G 6 HOH C 2 24 11 HOH HOH . 
G 6 HOH C 3 25 20 HOH HOH . 
G 6 HOH C 4 26 23 HOH HOH . 
G 6 HOH C 5 27 27 HOH HOH . 
G 6 HOH C 6 28 28 HOH HOH . 
G 6 HOH C 7 29 32 HOH HOH . 
G 6 HOH C 8 30 59 HOH HOH . 
G 6 HOH C 9 31 65 HOH HOH . 
G 6 HOH C 10 32 71 HOH HOH . 
G 6 HOH C 11 33 73 HOH HOH . 
G 6 HOH C 12 34 74 HOH HOH . 
G 6 HOH C 13 35 79 HOH HOH . 
H 6 HOH A 1 301 1 HOH HOH . 
H 6 HOH A 2 302 2 HOH HOH . 
H 6 HOH A 3 303 3 HOH HOH . 
H 6 HOH A 4 304 4 HOH HOH . 
H 6 HOH A 5 305 5 HOH HOH . 
H 6 HOH A 6 306 6 HOH HOH . 
H 6 HOH A 7 307 8 HOH HOH . 
H 6 HOH A 8 308 9 HOH HOH . 
H 6 HOH A 9 309 10 HOH HOH . 
H 6 HOH A 10 310 12 HOH HOH . 
H 6 HOH A 11 311 13 HOH HOH . 
H 6 HOH A 12 312 14 HOH HOH . 
H 6 HOH A 13 313 15 HOH HOH . 
H 6 HOH A 14 314 16 HOH HOH . 
H 6 HOH A 15 315 17 HOH HOH . 
H 6 HOH A 16 316 18 HOH HOH . 
H 6 HOH A 17 317 19 HOH HOH . 
H 6 HOH A 18 318 22 HOH HOH . 
H 6 HOH A 19 319 24 HOH HOH . 
H 6 HOH A 20 320 25 HOH HOH . 
H 6 HOH A 21 321 26 HOH HOH . 
H 6 HOH A 22 322 29 HOH HOH . 
H 6 HOH A 23 323 31 HOH HOH . 
H 6 HOH A 24 324 33 HOH HOH . 
H 6 HOH A 25 325 34 HOH HOH . 
H 6 HOH A 26 326 35 HOH HOH . 
H 6 HOH A 27 327 36 HOH HOH . 
H 6 HOH A 28 328 39 HOH HOH . 
H 6 HOH A 29 329 40 HOH HOH . 
H 6 HOH A 30 330 41 HOH HOH . 
H 6 HOH A 31 331 42 HOH HOH . 
H 6 HOH A 32 332 43 HOH HOH . 
H 6 HOH A 33 333 44 HOH HOH . 
H 6 HOH A 34 334 46 HOH HOH . 
H 6 HOH A 35 335 48 HOH HOH . 
H 6 HOH A 36 336 50 HOH HOH . 
H 6 HOH A 37 337 51 HOH HOH . 
H 6 HOH A 38 338 52 HOH HOH . 
H 6 HOH A 39 339 53 HOH HOH . 
H 6 HOH A 40 340 56 HOH HOH . 
H 6 HOH A 41 341 60 HOH HOH . 
H 6 HOH A 42 342 61 HOH HOH . 
H 6 HOH A 43 343 63 HOH HOH . 
H 6 HOH A 44 344 66 HOH HOH . 
H 6 HOH A 45 345 67 HOH HOH . 
H 6 HOH A 46 346 68 HOH HOH . 
H 6 HOH A 47 347 69 HOH HOH . 
H 6 HOH A 48 348 70 HOH HOH . 
H 6 HOH A 49 349 72 HOH HOH . 
H 6 HOH A 50 350 76 HOH HOH . 
H 6 HOH A 51 351 77 HOH HOH . 
H 6 HOH A 52 352 78 HOH HOH . 
H 6 HOH A 53 353 81 HOH HOH . 
H 6 HOH A 54 354 82 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NA 
_atom_site.label_atom_id         NA 
_atom_site.label_comp_id         NA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       4 
_atom_site.Cartn_x               37.009 
_atom_site.Cartn_y               25.299 
_atom_site.Cartn_z               -1.169 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        50.49 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          NA 
_atom_site.auth_comp_id          NA 
_atom_site.auth_seq_id           224 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              46 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           270 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           1 
#