data_1OSS
#
_model_server_result.job_id            maMSvxL9zGGdaAiPHScK5w 
_model_server_result.datetime_utc      '2024-10-18 16:23:52' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1oss 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":246}' 
#
_entry.id    1OSS 
#
_exptl.entry_id    1OSS 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              120.152 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            BENZAMIDINE 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1OSS 
_cell.length_a            50.079 
_cell.length_b            69.601 
_cell.length_c            119.829 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1OSS 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             E 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 22 A CYS 42 1_555 A SG CYS 38 A CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf2 A SG CYS 141 A CYS 168 1_555 A SG CYS 156 A CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf3 A SG CYS 168 A CYS 191 1_555 A SG CYS 197 A CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
metalc ? metalc1 A OD1 ASP 138 A ASP 165 1_555 D CA CA . A CA 249 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.623 ? 
metalc ? metalc2 A OD2 ASP 138 A ASP 165 1_555 D CA CA . A CA 249 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.98 ? 
metalc ? metalc3 A O GLU 154 A GLU 180 1_555 D CA CA . A CA 249 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.789 ? 
metalc ? metalc4 A OE2 GLU 208 A GLU 230 1_555 D CA CA . A CA 249 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.039 ? 
metalc ? metalc5 D CA CA . A CA 249 1_555 F O HOH . A HOH 294 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.867 ? 
#
_chem_comp.formula           'C7 H8 N2' 
_chem_comp.formula_weight    120.152 
_chem_comp.id                BEN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              BENZAMIDINE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 BEN doub 70 n y 
C1 C6 BEN sing 71 n y 
C1 C BEN sing 72 n n 
C2 C3 BEN sing 73 n y 
C2 H2 BEN sing 74 n n 
C3 C4 BEN doub 75 n y 
C3 H3 BEN sing 76 n n 
C4 C5 BEN sing 77 n y 
C4 H4 BEN sing 78 n n 
C5 C6 BEN doub 79 n y 
C5 H5 BEN sing 80 n n 
C6 H6 BEN sing 81 n n 
C N1 BEN doub 82 e n 
C N2 BEN sing 83 n n 
N1 HN1 BEN sing 84 n n 
N2 HN21 BEN sing 85 n n 
N2 HN22 BEN sing 86 n n 
#
_atom_sites.entry_id                     1OSS 
_atom_sites.fract_transf_matrix[1][1]    0.019968 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014368 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008345 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 SO4 A 1 247 247 SO4 SO4 . 
C 2 SO4 A 1 248 248 SO4 SO4 . 
D 3 CA A 1 249 249 CA CA . 
E 4 BEN A 1 246 246 BEN BEN . 
F 5 HOH A 1 250 1 HOH HOH . 
F 5 HOH A 2 251 2 HOH HOH . 
F 5 HOH A 3 252 3 HOH HOH . 
F 5 HOH A 4 253 4 HOH HOH . 
F 5 HOH A 5 254 5 HOH HOH . 
F 5 HOH A 6 255 6 HOH HOH . 
F 5 HOH A 7 256 7 HOH HOH . 
F 5 HOH A 8 257 8 HOH HOH . 
F 5 HOH A 9 258 9 HOH HOH . 
F 5 HOH A 10 259 10 HOH HOH . 
F 5 HOH A 11 260 11 HOH HOH . 
F 5 HOH A 12 261 12 HOH HOH . 
F 5 HOH A 13 262 13 HOH HOH . 
F 5 HOH A 14 263 14 HOH HOH . 
F 5 HOH A 15 264 15 HOH HOH . 
F 5 HOH A 16 265 16 HOH HOH . 
F 5 HOH A 17 266 17 HOH HOH . 
F 5 HOH A 18 267 18 HOH HOH . 
F 5 HOH A 19 268 19 HOH HOH . 
F 5 HOH A 20 269 20 HOH HOH . 
F 5 HOH A 21 270 21 HOH HOH . 
F 5 HOH A 22 271 22 HOH HOH . 
F 5 HOH A 23 272 23 HOH HOH . 
F 5 HOH A 24 273 24 HOH HOH . 
F 5 HOH A 25 274 25 HOH HOH . 
F 5 HOH A 26 275 26 HOH HOH . 
F 5 HOH A 27 276 27 HOH HOH . 
F 5 HOH A 28 277 28 HOH HOH . 
F 5 HOH A 29 278 29 HOH HOH . 
F 5 HOH A 30 279 30 HOH HOH . 
F 5 HOH A 31 280 31 HOH HOH . 
F 5 HOH A 32 281 32 HOH HOH . 
F 5 HOH A 33 282 33 HOH HOH . 
F 5 HOH A 34 283 34 HOH HOH . 
F 5 HOH A 35 284 35 HOH HOH . 
F 5 HOH A 36 285 36 HOH HOH . 
F 5 HOH A 37 286 37 HOH HOH . 
F 5 HOH A 38 287 38 HOH HOH . 
F 5 HOH A 39 288 39 HOH HOH . 
F 5 HOH A 40 289 40 HOH HOH . 
F 5 HOH A 41 290 41 HOH HOH . 
F 5 HOH A 42 291 42 HOH HOH . 
F 5 HOH A 43 292 43 HOH HOH . 
F 5 HOH A 44 293 44 HOH HOH . 
F 5 HOH A 45 294 45 HOH HOH . 
F 5 HOH A 46 295 46 HOH HOH . 
F 5 HOH A 47 296 47 HOH HOH . 
F 5 HOH A 48 297 48 HOH HOH . 
F 5 HOH A 49 298 49 HOH HOH . 
F 5 HOH A 50 299 50 HOH HOH . 
F 5 HOH A 51 300 51 HOH HOH . 
F 5 HOH A 52 301 52 HOH HOH . 
F 5 HOH A 53 302 53 HOH HOH . 
F 5 HOH A 54 303 54 HOH HOH . 
F 5 HOH A 55 304 55 HOH HOH . 
F 5 HOH A 56 305 56 HOH HOH . 
F 5 HOH A 57 306 57 HOH HOH . 
F 5 HOH A 58 307 58 HOH HOH . 
F 5 HOH A 59 308 59 HOH HOH . 
F 5 HOH A 60 309 60 HOH HOH . 
F 5 HOH A 61 310 61 HOH HOH . 
F 5 HOH A 62 311 62 HOH HOH . 
F 5 HOH A 63 312 63 HOH HOH . 
F 5 HOH A 64 313 64 HOH HOH . 
F 5 HOH A 65 314 65 HOH HOH . 
F 5 HOH A 66 315 66 HOH HOH . 
F 5 HOH A 67 316 67 HOH HOH . 
F 5 HOH A 68 317 68 HOH HOH . 
F 5 HOH A 69 318 69 HOH HOH . 
F 5 HOH A 70 319 70 HOH HOH . 
F 5 HOH A 71 320 71 HOH HOH . 
F 5 HOH A 72 321 72 HOH HOH . 
F 5 HOH A 73 322 73 HOH HOH . 
F 5 HOH A 74 323 74 HOH HOH . 
F 5 HOH A 75 324 75 HOH HOH . 
F 5 HOH A 76 325 76 HOH HOH . 
F 5 HOH A 77 326 77 HOH HOH . 
F 5 HOH A 78 327 78 HOH HOH . 
F 5 HOH A 79 328 79 HOH HOH . 
F 5 HOH A 80 329 80 HOH HOH . 
F 5 HOH A 81 330 81 HOH HOH . 
F 5 HOH A 82 331 82 HOH HOH . 
F 5 HOH A 83 332 83 HOH HOH . 
F 5 HOH A 84 333 84 HOH HOH . 
F 5 HOH A 85 334 85 HOH HOH . 
F 5 HOH A 86 335 86 HOH HOH . 
F 5 HOH A 87 336 87 HOH HOH . 
F 5 HOH A 88 337 88 HOH HOH . 
F 5 HOH A 89 338 89 HOH HOH . 
F 5 HOH A 90 339 90 HOH HOH . 
F 5 HOH A 91 340 91 HOH HOH . 
F 5 HOH A 92 341 92 HOH HOH . 
F 5 HOH A 93 342 93 HOH HOH . 
F 5 HOH A 94 343 94 HOH HOH . 
F 5 HOH A 95 344 95 HOH HOH . 
F 5 HOH A 96 345 96 HOH HOH . 
F 5 HOH A 97 346 97 HOH HOH . 
F 5 HOH A 98 347 98 HOH HOH . 
F 5 HOH A 99 348 99 HOH HOH . 
F 5 HOH A 100 349 100 HOH HOH . 
F 5 HOH A 101 350 101 HOH HOH . 
F 5 HOH A 102 351 102 HOH HOH . 
F 5 HOH A 103 352 103 HOH HOH . 
F 5 HOH A 104 353 104 HOH HOH . 
F 5 HOH A 105 354 105 HOH HOH . 
F 5 HOH A 106 355 106 HOH HOH . 
F 5 HOH A 107 356 107 HOH HOH . 
F 5 HOH A 108 357 108 HOH HOH . 
F 5 HOH A 109 358 109 HOH HOH . 
F 5 HOH A 110 359 110 HOH HOH . 
F 5 HOH A 111 360 111 HOH HOH . 
F 5 HOH A 112 361 112 HOH HOH . 
F 5 HOH A 113 362 113 HOH HOH . 
F 5 HOH A 114 363 114 HOH HOH . 
F 5 HOH A 115 364 115 HOH HOH . 
F 5 HOH A 116 365 116 HOH HOH . 
F 5 HOH A 117 366 117 HOH HOH . 
F 5 HOH A 118 367 118 HOH HOH . 
F 5 HOH A 119 368 119 HOH HOH . 
F 5 HOH A 120 369 120 HOH HOH . 
F 5 HOH A 121 370 121 HOH HOH . 
F 5 HOH A 122 371 122 HOH HOH . 
F 5 HOH A 123 372 123 HOH HOH . 
F 5 HOH A 124 373 124 HOH HOH . 
F 5 HOH A 125 374 125 HOH HOH . 
F 5 HOH A 126 375 126 HOH HOH . 
F 5 HOH A 127 376 127 HOH HOH . 
F 5 HOH A 128 377 128 HOH HOH . 
F 5 HOH A 129 378 129 HOH HOH . 
F 5 HOH A 130 379 130 HOH HOH . 
F 5 HOH A 131 380 131 HOH HOH . 
F 5 HOH A 132 381 132 HOH HOH . 
F 5 HOH A 133 382 133 HOH HOH . 
F 5 HOH A 134 383 134 HOH HOH . 
F 5 HOH A 135 384 135 HOH HOH . 
F 5 HOH A 136 385 136 HOH HOH . 
F 5 HOH A 137 386 137 HOH HOH . 
F 5 HOH A 138 387 138 HOH HOH . 
F 5 HOH A 139 388 139 HOH HOH . 
F 5 HOH A 140 389 140 HOH HOH . 
F 5 HOH A 141 390 141 HOH HOH . 
F 5 HOH A 142 391 142 HOH HOH . 
F 5 HOH A 143 392 143 HOH HOH . 
F 5 HOH A 144 393 144 HOH HOH . 
F 5 HOH A 145 394 145 HOH HOH . 
F 5 HOH A 146 395 146 HOH HOH . 
F 5 HOH A 147 396 147 HOH HOH . 
F 5 HOH A 148 397 148 HOH HOH . 
F 5 HOH A 149 398 149 HOH HOH . 
F 5 HOH A 150 399 150 HOH HOH . 
F 5 HOH A 151 400 151 HOH HOH . 
F 5 HOH A 152 401 152 HOH HOH . 
F 5 HOH A 153 402 153 HOH HOH . 
F 5 HOH A 154 403 154 HOH HOH . 
F 5 HOH A 155 404 155 HOH HOH . 
F 5 HOH A 156 405 156 HOH HOH . 
F 5 HOH A 157 406 157 HOH HOH . 
F 5 HOH A 158 407 158 HOH HOH . 
F 5 HOH A 159 408 159 HOH HOH . 
F 5 HOH A 160 409 160 HOH HOH . 
F 5 HOH A 161 410 161 HOH HOH . 
F 5 HOH A 162 411 162 HOH HOH . 
F 5 HOH A 163 412 163 HOH HOH . 
F 5 HOH A 164 413 164 HOH HOH . 
F 5 HOH A 165 414 165 HOH HOH . 
F 5 HOH A 166 415 166 HOH HOH . 
F 5 HOH A 167 416 167 HOH HOH . 
F 5 HOH A 168 417 168 HOH HOH . 
F 5 HOH A 169 418 169 HOH HOH . 
F 5 HOH A 170 419 170 HOH HOH . 
F 5 HOH A 171 420 171 HOH HOH . 
F 5 HOH A 172 421 172 HOH HOH . 
F 5 HOH A 173 422 173 HOH HOH . 
F 5 HOH A 174 423 174 HOH HOH . 
F 5 HOH A 175 424 175 HOH HOH . 
F 5 HOH A 176 425 176 HOH HOH . 
F 5 HOH A 177 426 177 HOH HOH . 
F 5 HOH A 178 427 178 HOH HOH . 
F 5 HOH A 179 428 179 HOH HOH . 
F 5 HOH A 180 429 180 HOH HOH . 
F 5 HOH A 181 430 181 HOH HOH . 
F 5 HOH A 182 431 182 HOH HOH . 
F 5 HOH A 183 432 183 HOH HOH . 
F 5 HOH A 184 433 184 HOH HOH . 
F 5 HOH A 185 434 185 HOH HOH . 
F 5 HOH A 186 435 186 HOH HOH . 
F 5 HOH A 187 436 187 HOH HOH . 
F 5 HOH A 188 437 188 HOH HOH . 
F 5 HOH A 189 438 189 HOH HOH . 
F 5 HOH A 190 439 190 HOH HOH . 
F 5 HOH A 191 440 191 HOH HOH . 
F 5 HOH A 192 441 192 HOH HOH . 
F 5 HOH A 193 442 193 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 BEN . . . E 4 44.855 -22.957 62.419 1 7.08 ? C1 BEN 246 A 1 
HETATM 2 C C2 BEN . . . E 4 44.868 -21.817 63.288 1 7.07 ? C2 BEN 246 A 1 
HETATM 3 C C3 BEN . . . E 4 43.649 -21.204 63.715 1 5.65 ? C3 BEN 246 A 1 
HETATM 4 C C4 BEN . . . E 4 42.396 -21.723 63.276 1 5.18 ? C4 BEN 246 A 1 
HETATM 5 C C5 BEN . . . E 4 42.338 -22.86 62.403 1 8.14 ? C5 BEN 246 A 1 
HETATM 6 C C6 BEN . . . E 4 43.583 -23.471 61.981 1 7.86 ? C6 BEN 246 A 1 
HETATM 7 C C BEN . . . E 4 46.1 -23.622 61.968 1 4.9 ? C BEN 246 A 1 
HETATM 8 N N1 BEN . . . E 4 46.062 -24.462 60.941 1 5.37 ? N1 BEN 246 A 1 
HETATM 9 N N2 BEN . . . E 4 47.253 -23.368 62.639 1 4.86 ? N2 BEN 246 A 1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           5 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           240 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           9 
#