data_1OTH # _model_server_result.job_id JN83yhoB-PnLNdg9Z-Kggg _model_server_result.datetime_utc '2024-11-14 04:02:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1oth # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":355}' # _entry.id 1OTH # _exptl.entry_id 1OTH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 254.178 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-(PHOSPHONOACETYL)-L-ORNITHINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1OTH _cell.length_a 125.9 _cell.length_b 125.9 _cell.length_c 125.9 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1OTH _symmetry.cell_setting ? _symmetry.Int_Tables_number 198 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 3' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_555 z,x,y 0 0 1 1 0 0 0 1 0 0 0 0 3 'crystal symmetry operation' 9_555 y,z,x 0 1 0 0 0 1 1 0 0 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C7 H15 N2 O6 P' _chem_comp.formula_weight 254.178 _chem_comp.id PAO _chem_comp.mon_nstd_flag . _chem_comp.name N-(PHOSPHONOACETYL)-L-ORNITHINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA PAO sing 237 n n N HN1 PAO sing 238 n n N HN2 PAO sing 239 n n CA CB PAO sing 240 n n CA C PAO sing 241 n n CA HA PAO sing 242 n n CB CG PAO sing 243 n n CB HB1 PAO sing 244 n n CB HB2 PAO sing 245 n n CG CD PAO sing 246 n n CG HG1 PAO sing 247 n n CG HG2 PAO sing 248 n n CD NE PAO sing 249 n n CD HD1 PAO sing 250 n n CD HD2 PAO sing 251 n n NE C1 PAO sing 252 n n NE HNE PAO sing 253 n n C O PAO doub 254 n n C OXT PAO sing 255 n n OXT HXT PAO sing 256 n n C1 O1 PAO doub 257 n n C1 C1P PAO sing 258 n n C1P P PAO sing 259 n n C1P HP1 PAO sing 260 n n C1P HP2 PAO sing 261 n n P O1P PAO doub 262 n n P O2P PAO sing 263 n n P O3P PAO sing 264 n n O2P HOP2 PAO sing 265 n n O3P HOP3 PAO sing 266 n n # _atom_sites.entry_id 1OTH _atom_sites.fract_transf_matrix[1][1] 0.007943 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007943 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007943 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PAO A 1 355 355 PAO PAO . C 3 HOH A 1 356 356 HOH HOH . C 3 HOH A 2 357 357 HOH HOH . C 3 HOH A 3 358 358 HOH HOH . C 3 HOH A 4 359 359 HOH HOH . C 3 HOH A 5 360 360 HOH HOH . C 3 HOH A 6 361 361 HOH HOH . C 3 HOH A 7 362 362 HOH HOH . C 3 HOH A 8 363 363 HOH HOH . C 3 HOH A 9 364 364 HOH HOH . C 3 HOH A 10 365 365 HOH HOH . C 3 HOH A 11 366 366 HOH HOH . C 3 HOH A 12 367 367 HOH HOH . C 3 HOH A 13 368 368 HOH HOH . C 3 HOH A 14 369 369 HOH HOH . C 3 HOH A 15 370 370 HOH HOH . C 3 HOH A 16 371 371 HOH HOH . C 3 HOH A 17 372 372 HOH HOH . C 3 HOH A 18 373 373 HOH HOH . C 3 HOH A 19 374 374 HOH HOH . C 3 HOH A 20 375 375 HOH HOH . C 3 HOH A 21 376 376 HOH HOH . C 3 HOH A 22 377 377 HOH HOH . C 3 HOH A 23 378 378 HOH HOH . C 3 HOH A 24 379 379 HOH HOH . C 3 HOH A 25 380 380 HOH HOH . C 3 HOH A 26 381 381 HOH HOH . C 3 HOH A 27 382 382 HOH HOH . C 3 HOH A 28 383 383 HOH HOH . C 3 HOH A 29 384 384 HOH HOH . C 3 HOH A 30 385 385 HOH HOH . C 3 HOH A 31 386 386 HOH HOH . C 3 HOH A 32 387 387 HOH HOH . C 3 HOH A 33 388 388 HOH HOH . C 3 HOH A 34 389 389 HOH HOH . C 3 HOH A 35 390 390 HOH HOH . C 3 HOH A 36 391 391 HOH HOH . C 3 HOH A 37 392 392 HOH HOH . C 3 HOH A 38 393 393 HOH HOH . C 3 HOH A 39 394 394 HOH HOH . C 3 HOH A 40 395 395 HOH HOH . C 3 HOH A 41 396 396 HOH HOH . C 3 HOH A 42 397 397 HOH HOH . C 3 HOH A 43 398 398 HOH HOH . C 3 HOH A 44 399 399 HOH HOH . C 3 HOH A 45 400 400 HOH HOH . C 3 HOH A 46 401 401 HOH HOH . C 3 HOH A 47 402 402 HOH HOH . C 3 HOH A 48 403 403 HOH HOH . C 3 HOH A 49 404 404 HOH HOH . C 3 HOH A 50 405 405 HOH HOH . C 3 HOH A 51 406 406 HOH HOH . C 3 HOH A 52 407 407 HOH HOH . C 3 HOH A 53 408 408 HOH HOH . C 3 HOH A 54 409 409 HOH HOH . C 3 HOH A 55 410 410 HOH HOH . C 3 HOH A 56 411 411 HOH HOH . C 3 HOH A 57 412 412 HOH HOH . C 3 HOH A 58 413 413 HOH HOH . C 3 HOH A 59 414 414 HOH HOH . C 3 HOH A 60 415 415 HOH HOH . C 3 HOH A 61 416 416 HOH HOH . C 3 HOH A 62 417 417 HOH HOH . C 3 HOH A 63 418 418 HOH HOH . C 3 HOH A 64 419 419 HOH HOH . C 3 HOH A 65 420 420 HOH HOH . C 3 HOH A 66 421 421 HOH HOH . C 3 HOH A 67 422 422 HOH HOH . C 3 HOH A 68 423 423 HOH HOH . C 3 HOH A 69 424 424 HOH HOH . C 3 HOH A 70 425 425 HOH HOH . C 3 HOH A 71 426 426 HOH HOH . C 3 HOH A 72 427 427 HOH HOH . C 3 HOH A 73 428 428 HOH HOH . C 3 HOH A 74 429 429 HOH HOH . C 3 HOH A 75 430 430 HOH HOH . C 3 HOH A 76 431 431 HOH HOH . C 3 HOH A 77 432 432 HOH HOH . C 3 HOH A 78 433 433 HOH HOH . C 3 HOH A 79 434 434 HOH HOH . C 3 HOH A 80 435 435 HOH HOH . C 3 HOH A 81 436 436 HOH HOH . C 3 HOH A 82 437 437 HOH HOH . C 3 HOH A 83 438 438 HOH HOH . C 3 HOH A 84 439 439 HOH HOH . C 3 HOH A 85 440 440 HOH HOH . C 3 HOH A 86 441 441 HOH HOH . C 3 HOH A 87 442 442 HOH HOH . C 3 HOH A 88 443 443 HOH HOH . C 3 HOH A 89 444 444 HOH HOH . C 3 HOH A 90 445 445 HOH HOH . C 3 HOH A 91 446 446 HOH HOH . C 3 HOH A 92 447 447 HOH HOH . C 3 HOH A 93 448 448 HOH HOH . C 3 HOH A 94 449 449 HOH HOH . C 3 HOH A 95 450 450 HOH HOH . C 3 HOH A 96 451 451 HOH HOH . C 3 HOH A 97 452 452 HOH HOH . C 3 HOH A 98 453 453 HOH HOH . C 3 HOH A 99 454 454 HOH HOH . C 3 HOH A 100 455 455 HOH HOH . C 3 HOH A 101 456 456 HOH HOH . C 3 HOH A 102 457 457 HOH HOH . C 3 HOH A 103 458 458 HOH HOH . C 3 HOH A 104 459 459 HOH HOH . C 3 HOH A 105 460 460 HOH HOH . C 3 HOH A 106 461 461 HOH HOH . C 3 HOH A 107 462 462 HOH HOH . C 3 HOH A 108 463 463 HOH HOH . C 3 HOH A 109 464 464 HOH HOH . C 3 HOH A 110 465 465 HOH HOH . C 3 HOH A 111 466 466 HOH HOH . C 3 HOH A 112 467 467 HOH HOH . C 3 HOH A 113 468 468 HOH HOH . C 3 HOH A 114 469 469 HOH HOH . C 3 HOH A 115 470 470 HOH HOH . C 3 HOH A 116 471 471 HOH HOH . C 3 HOH A 117 472 472 HOH HOH . C 3 HOH A 118 473 473 HOH HOH . C 3 HOH A 119 474 474 HOH HOH . C 3 HOH A 120 475 475 HOH HOH . C 3 HOH A 121 476 476 HOH HOH . C 3 HOH A 122 477 477 HOH HOH . C 3 HOH A 123 478 478 HOH HOH . C 3 HOH A 124 479 479 HOH HOH . C 3 HOH A 125 480 480 HOH HOH . C 3 HOH A 126 481 481 HOH HOH . C 3 HOH A 127 482 482 HOH HOH . C 3 HOH A 128 483 483 HOH HOH . C 3 HOH A 129 484 484 HOH HOH . C 3 HOH A 130 485 485 HOH HOH . C 3 HOH A 131 486 486 HOH HOH . C 3 HOH A 132 487 487 HOH HOH . C 3 HOH A 133 488 488 HOH HOH . C 3 HOH A 134 489 489 HOH HOH . C 3 HOH A 135 490 490 HOH HOH . C 3 HOH A 136 491 491 HOH HOH . C 3 HOH A 137 492 492 HOH HOH . C 3 HOH A 138 493 493 HOH HOH . C 3 HOH A 139 494 494 HOH HOH . C 3 HOH A 140 495 495 HOH HOH . C 3 HOH A 141 496 496 HOH HOH . C 3 HOH A 142 497 497 HOH HOH . C 3 HOH A 143 498 498 HOH HOH . C 3 HOH A 144 499 499 HOH HOH . C 3 HOH A 145 500 500 HOH HOH . C 3 HOH A 146 501 501 HOH HOH . C 3 HOH A 147 502 502 HOH HOH . C 3 HOH A 148 503 503 HOH HOH . C 3 HOH A 149 504 504 HOH HOH . C 3 HOH A 150 505 505 HOH HOH . C 3 HOH A 151 506 506 HOH HOH . C 3 HOH A 152 507 507 HOH HOH . C 3 HOH A 153 508 508 HOH HOH . C 3 HOH A 154 509 509 HOH HOH . C 3 HOH A 155 510 510 HOH HOH . C 3 HOH A 156 511 511 HOH HOH . C 3 HOH A 157 512 512 HOH HOH . C 3 HOH A 158 513 513 HOH HOH . C 3 HOH A 159 514 514 HOH HOH . C 3 HOH A 160 515 515 HOH HOH . C 3 HOH A 161 516 516 HOH HOH . C 3 HOH A 162 517 517 HOH HOH . C 3 HOH A 163 518 518 HOH HOH . C 3 HOH A 164 519 519 HOH HOH . C 3 HOH A 165 520 520 HOH HOH . C 3 HOH A 166 521 521 HOH HOH . C 3 HOH A 167 522 522 HOH HOH . C 3 HOH A 168 523 523 HOH HOH . C 3 HOH A 169 524 524 HOH HOH . C 3 HOH A 170 525 525 HOH HOH . C 3 HOH A 171 526 526 HOH HOH . C 3 HOH A 172 527 527 HOH HOH . C 3 HOH A 173 528 528 HOH HOH . C 3 HOH A 174 529 529 HOH HOH . C 3 HOH A 175 530 530 HOH HOH . C 3 HOH A 176 531 531 HOH HOH . C 3 HOH A 177 532 532 HOH HOH . C 3 HOH A 178 533 533 HOH HOH . C 3 HOH A 179 534 534 HOH HOH . C 3 HOH A 180 535 535 HOH HOH . C 3 HOH A 181 536 536 HOH HOH . C 3 HOH A 182 537 537 HOH HOH . C 3 HOH A 183 538 538 HOH HOH . C 3 HOH A 184 539 539 HOH HOH . C 3 HOH A 185 540 540 HOH HOH . C 3 HOH A 186 541 541 HOH HOH . C 3 HOH A 187 542 542 HOH HOH . C 3 HOH A 188 543 543 HOH HOH . C 3 HOH A 189 544 544 HOH HOH . C 3 HOH A 190 545 545 HOH HOH . C 3 HOH A 191 546 546 HOH HOH . C 3 HOH A 192 547 547 HOH HOH . C 3 HOH A 193 548 548 HOH HOH . C 3 HOH A 194 549 549 HOH HOH . C 3 HOH A 195 550 550 HOH HOH . C 3 HOH A 196 551 551 HOH HOH . C 3 HOH A 197 552 552 HOH HOH . C 3 HOH A 198 553 553 HOH HOH . C 3 HOH A 199 554 554 HOH HOH . C 3 HOH A 200 555 555 HOH HOH . C 3 HOH A 201 556 556 HOH HOH . C 3 HOH A 202 557 557 HOH HOH . C 3 HOH A 203 558 558 HOH HOH . C 3 HOH A 204 559 559 HOH HOH . C 3 HOH A 205 560 560 HOH HOH . C 3 HOH A 206 561 561 HOH HOH . C 3 HOH A 207 562 562 HOH HOH . C 3 HOH A 208 563 563 HOH HOH . C 3 HOH A 209 564 564 HOH HOH . C 3 HOH A 210 565 565 HOH HOH . C 3 HOH A 211 566 566 HOH HOH . C 3 HOH A 212 567 567 HOH HOH . C 3 HOH A 213 568 568 HOH HOH . C 3 HOH A 214 569 569 HOH HOH . C 3 HOH A 215 570 570 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N PAO . . . B 2 5.124 4.377 -23.54 1 13.31 ? N PAO 355 A 1 HETATM 2 C CA PAO . . . B 2 3.964 4.126 -22.705 1 13.57 ? CA PAO 355 A 1 HETATM 3 C CB PAO . . . B 2 3.014 3.188 -23.458 1 13.7 ? CB PAO 355 A 1 HETATM 4 C CG PAO . . . B 2 1.642 2.982 -22.812 1 13.26 ? CG PAO 355 A 1 HETATM 5 C CD PAO . . . B 2 0.804 1.974 -23.608 1 12.11 ? CD PAO 355 A 1 HETATM 6 N NE PAO . . . B 2 -0.603 2.095 -23.257 1 14.74 ? NE PAO 355 A 1 HETATM 7 C C PAO . . . B 2 4.453 3.498 -21.406 1 13.82 ? C PAO 355 A 1 HETATM 8 O O PAO . . . B 2 4.035 3.945 -20.341 1 14.54 ? O PAO 355 A 1 HETATM 9 O OXT PAO . . . B 2 5.271 2.584 -21.469 1 13.63 ? OXT PAO 355 A 1 HETATM 10 C C1 PAO . . . B 2 -1.46 1.069 -23.284 1 12.21 ? C1 PAO 355 A 1 HETATM 11 O O1 PAO . . . B 2 -1.148 -0.084 -23.582 1 12.56 ? O1 PAO 355 A 1 HETATM 12 C C1P PAO . . . B 2 -2.864 1.436 -22.843 1 12.86 ? C1P PAO 355 A 1 HETATM 13 P P PAO . . . B 2 -3.106 0.857 -21.145 1 15.44 ? P PAO 355 A 1 HETATM 14 O O1P PAO . . . B 2 -1.848 1.259 -20.243 1 14.66 ? O1P PAO 355 A 1 HETATM 15 O O2P PAO . . . B 2 -3.263 -0.722 -21.132 1 16.51 ? O2P PAO 355 A 1 HETATM 16 O O3P PAO . . . B 2 -4.417 1.534 -20.541 1 16.39 ? O3P PAO 355 A 1 # _model_server_stats.io_time_ms 56 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 16 #