data_1OVP # _model_server_result.job_id F4x46UmQUBblpNb2fXN0xQ _model_server_result.datetime_utc '2024-11-28 15:21:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1ovp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":115}' # _entry.id 1OVP # _exptl.entry_id 1OVP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 180.156 _entity.id 2 _entity.src_method man _entity.type non-polymer _entity.pdbx_description beta-D-fructopyranose _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1OVP _cell.length_a 53.06 _cell.length_b 69.05 _cell.length_c 74.09 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1OVP _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_655 -x+1,-y,z -1 0 0 0 -1 0 0 0 1 53.06 0 0 3 'crystal symmetry operation' 3_656 -x+1,y,-z+1 -1 0 0 0 1 0 0 0 -1 53.06 0 74.09 4 'crystal symmetry operation' 4_556 x,-y,-z+1 1 0 0 0 -1 0 0 0 -1 0 0 74.09 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O ASN 21 A ASN 21 1_555 D CA CA . A CA 117 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.347 ? metalc ? metalc2 A OE1 GLU 95 A GLU 95 1_555 C CA CA . A CA 116 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.447 ? metalc ? metalc3 A OE2 GLU 95 A GLU 95 1_555 C CA CA . A CA 116 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.358 ? metalc ? metalc4 A OD1 ASP 99 A ASP 99 1_555 C CA CA . A CA 116 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.354 ? metalc ? metalc5 A OD1 ASP 101 A ASP 101 1_555 C CA CA . A CA 116 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.35 ? metalc ? metalc6 A OD2 ASP 101 A ASP 101 1_555 D CA CA . A CA 117 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.356 ? metalc ? metalc7 A OD1 ASP 101 A ASP 101 1_555 D CA CA . A CA 117 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.077 ? metalc ? metalc8 A OD1 ASN 103 A ASN 103 1_555 D CA CA . A CA 117 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.336 ? metalc ? metalc9 A OD2 ASP 104 A ASP 104 1_555 C CA CA . A CA 116 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.423 ? metalc ? metalc10 A OD1 ASP 104 A ASP 104 1_555 C CA CA . A CA 116 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.596 ? metalc ? metalc11 A OD1 ASP 104 A ASP 104 1_555 D CA CA . A CA 117 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.372 ? metalc ? metalc12 A O GLY 114 A GLY 114 3_656 D CA CA . A CA 117 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.423 ? metalc ? metalc13 B O3 BDF . A BDF 115 1_555 C CA CA . A CA 116 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.598 ? metalc ? metalc14 B O4 BDF . A BDF 115 1_555 C CA CA . A CA 116 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.55 ? metalc ? metalc15 B O4 BDF . A BDF 115 1_555 D CA CA . A CA 117 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.46 ? metalc ? metalc16 B O5 BDF . A BDF 115 1_555 D CA CA . A CA 117 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.42 ? # _chem_comp.formula 'C6 H12 O6' _chem_comp.formula_weight 180.156 _chem_comp.id BDF _chem_comp.mon_nstd_flag . _chem_comp.name beta-D-fructopyranose _chem_comp.type 'd-saccharide, beta linking' _chem_comp.pdbx_synonyms beta-D-fructose;D-fructose;fructose # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 BDF sing 70 n n C1 O1 BDF sing 71 n n C1 H11 BDF sing 72 n n C1 H12 BDF sing 73 n n C2 C3 BDF sing 74 n n C2 O2 BDF sing 75 n n C2 O6 BDF sing 76 n n C3 C4 BDF sing 77 n n C3 O3 BDF sing 78 n n C3 H3 BDF sing 79 n n C4 C5 BDF sing 80 n n C4 O4 BDF sing 81 n n C4 H4 BDF sing 82 n n C5 C6 BDF sing 83 n n C5 O5 BDF sing 84 n n C5 H5 BDF sing 85 n n C6 O6 BDF sing 86 n n C6 H61 BDF sing 87 n n C6 H62 BDF sing 88 n n O1 HO1 BDF sing 89 n n O2 HO2 BDF sing 90 n n O3 HO3 BDF sing 91 n n O4 HO4 BDF sing 92 n n O5 HO5 BDF sing 93 n n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.identifier _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version BDF DFrupb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 BDF b-D-fructopyranose 'COMMON NAME' GMML 1 BDF b-D-Frup 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 BDF Fru 'SNFG CARBOHYDRATE SYMBOL' GMML 1 # _atom_sites.entry_id 1OVP _atom_sites.fract_transf_matrix[1][1] 0.018847 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014482 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013497 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 BDF A 1 115 115 BDF FRU . C 3 CA A 1 116 116 CA CA . D 3 CA A 1 117 117 CA CA . E 4 HOH A 1 201 201 HOH HOH . E 4 HOH A 2 202 202 HOH HOH . E 4 HOH A 3 203 203 HOH HOH . E 4 HOH A 4 204 204 HOH HOH . E 4 HOH A 5 205 205 HOH HOH . E 4 HOH A 6 206 206 HOH HOH . E 4 HOH A 7 207 207 HOH HOH . E 4 HOH A 8 208 208 HOH HOH . E 4 HOH A 9 209 209 HOH HOH . E 4 HOH A 10 210 210 HOH HOH . E 4 HOH A 11 211 211 HOH HOH . E 4 HOH A 12 212 212 HOH HOH . E 4 HOH A 13 213 213 HOH HOH . E 4 HOH A 14 214 214 HOH HOH . E 4 HOH A 15 215 215 HOH HOH . E 4 HOH A 16 216 216 HOH HOH . E 4 HOH A 17 217 217 HOH HOH . E 4 HOH A 18 218 218 HOH HOH . E 4 HOH A 19 219 219 HOH HOH . E 4 HOH A 20 220 220 HOH HOH . E 4 HOH A 21 221 221 HOH HOH . E 4 HOH A 22 222 222 HOH HOH . E 4 HOH A 23 223 223 HOH HOH . E 4 HOH A 24 224 224 HOH HOH . E 4 HOH A 25 225 225 HOH HOH . E 4 HOH A 26 226 226 HOH HOH . E 4 HOH A 27 227 227 HOH HOH . E 4 HOH A 28 228 228 HOH HOH . E 4 HOH A 29 229 229 HOH HOH . E 4 HOH A 30 230 230 HOH HOH . E 4 HOH A 31 231 231 HOH HOH . E 4 HOH A 32 232 232 HOH HOH . E 4 HOH A 33 233 233 HOH HOH . E 4 HOH A 34 234 234 HOH HOH . E 4 HOH A 35 235 235 HOH HOH . E 4 HOH A 36 236 236 HOH HOH . E 4 HOH A 37 237 237 HOH HOH . E 4 HOH A 38 238 238 HOH HOH . E 4 HOH A 39 239 239 HOH HOH . E 4 HOH A 40 240 240 HOH HOH . E 4 HOH A 41 241 241 HOH HOH . E 4 HOH A 42 242 242 HOH HOH . E 4 HOH A 43 243 243 HOH HOH . E 4 HOH A 44 244 244 HOH HOH . E 4 HOH A 45 245 245 HOH HOH . E 4 HOH A 46 246 246 HOH HOH . E 4 HOH A 47 247 247 HOH HOH . E 4 HOH A 48 248 248 HOH HOH . E 4 HOH A 49 249 249 HOH HOH . E 4 HOH A 50 250 250 HOH HOH . E 4 HOH A 51 251 251 HOH HOH . E 4 HOH A 52 252 252 HOH HOH . E 4 HOH A 53 253 253 HOH HOH . E 4 HOH A 54 254 254 HOH HOH . E 4 HOH A 55 255 255 HOH HOH . E 4 HOH A 56 256 256 HOH HOH . E 4 HOH A 57 257 257 HOH HOH . E 4 HOH A 58 258 258 HOH HOH . E 4 HOH A 59 259 259 HOH HOH . E 4 HOH A 60 260 260 HOH HOH . E 4 HOH A 61 261 261 HOH HOH . E 4 HOH A 62 262 262 HOH HOH . E 4 HOH A 63 263 263 HOH HOH . E 4 HOH A 64 264 264 HOH HOH . E 4 HOH A 65 265 265 HOH HOH . E 4 HOH A 66 266 266 HOH HOH . E 4 HOH A 67 267 267 HOH HOH . E 4 HOH A 68 268 268 HOH HOH . E 4 HOH A 69 269 269 HOH HOH . E 4 HOH A 70 270 270 HOH HOH . E 4 HOH A 71 271 271 HOH HOH . E 4 HOH A 72 272 272 HOH HOH . E 4 HOH A 73 273 273 HOH HOH . E 4 HOH A 74 274 274 HOH HOH . E 4 HOH A 75 275 275 HOH HOH . E 4 HOH A 76 276 276 HOH HOH . E 4 HOH A 77 277 277 HOH HOH . E 4 HOH A 78 278 278 HOH HOH . E 4 HOH A 79 279 279 HOH HOH . E 4 HOH A 80 280 280 HOH HOH . E 4 HOH A 81 281 281 HOH HOH . E 4 HOH A 82 282 282 HOH HOH . E 4 HOH A 83 283 283 HOH HOH . E 4 HOH A 84 284 284 HOH HOH . E 4 HOH A 85 285 285 HOH HOH . E 4 HOH A 86 286 286 HOH HOH . E 4 HOH A 87 287 287 HOH HOH . E 4 HOH A 88 288 288 HOH HOH . E 4 HOH A 89 289 289 HOH HOH . E 4 HOH A 90 290 290 HOH HOH . E 4 HOH A 91 291 291 HOH HOH . E 4 HOH A 92 292 292 HOH HOH . E 4 HOH A 93 293 293 HOH HOH . E 4 HOH A 94 294 294 HOH HOH . E 4 HOH A 95 295 295 HOH HOH . E 4 HOH A 96 296 296 HOH HOH . E 4 HOH A 97 297 297 HOH HOH . E 4 HOH A 98 298 298 HOH HOH . E 4 HOH A 99 299 299 HOH HOH . E 4 HOH A 100 300 300 HOH HOH . E 4 HOH A 101 301 301 HOH HOH . E 4 HOH A 102 302 302 HOH HOH . E 4 HOH A 103 303 303 HOH HOH . E 4 HOH A 104 304 304 HOH HOH . E 4 HOH A 105 305 305 HOH HOH . E 4 HOH A 106 306 306 HOH HOH . E 4 HOH A 107 307 307 HOH HOH . E 4 HOH A 108 308 308 HOH HOH . E 4 HOH A 109 309 309 HOH HOH . E 4 HOH A 110 310 310 HOH HOH . E 4 HOH A 111 311 311 HOH HOH . E 4 HOH A 112 312 312 HOH HOH . E 4 HOH A 113 313 313 HOH HOH . E 4 HOH A 114 314 314 HOH HOH . E 4 HOH A 115 315 315 HOH HOH . E 4 HOH A 116 316 316 HOH HOH . E 4 HOH A 117 317 317 HOH HOH . E 4 HOH A 118 318 318 HOH HOH . E 4 HOH A 119 319 319 HOH HOH . E 4 HOH A 120 320 320 HOH HOH . E 4 HOH A 121 321 321 HOH HOH . E 4 HOH A 122 322 322 HOH HOH . E 4 HOH A 123 323 323 HOH HOH . E 4 HOH A 124 324 324 HOH HOH . E 4 HOH A 125 325 325 HOH HOH . E 4 HOH A 126 326 326 HOH HOH . E 4 HOH A 127 327 327 HOH HOH . E 4 HOH A 128 328 328 HOH HOH . E 4 HOH A 129 329 329 HOH HOH . E 4 HOH A 130 330 330 HOH HOH . E 4 HOH A 131 331 331 HOH HOH . E 4 HOH A 132 332 332 HOH HOH . E 4 HOH A 133 333 333 HOH HOH . E 4 HOH A 134 334 334 HOH HOH . E 4 HOH A 135 335 335 HOH HOH . E 4 HOH A 136 336 336 HOH HOH . E 4 HOH A 137 337 337 HOH HOH . E 4 HOH A 138 338 338 HOH HOH . E 4 HOH A 139 339 339 HOH HOH . E 4 HOH A 140 340 340 HOH HOH . E 4 HOH A 141 341 341 HOH HOH . E 4 HOH A 142 342 342 HOH HOH . E 4 HOH A 143 343 343 HOH HOH . E 4 HOH A 144 344 344 HOH HOH . E 4 HOH A 145 345 345 HOH HOH . E 4 HOH A 146 346 346 HOH HOH . E 4 HOH A 147 347 347 HOH HOH . E 4 HOH A 148 348 348 HOH HOH . E 4 HOH A 149 349 349 HOH HOH . E 4 HOH A 150 350 350 HOH HOH . E 4 HOH A 151 351 351 HOH HOH . E 4 HOH A 152 352 352 HOH HOH . E 4 HOH A 153 353 353 HOH HOH . E 4 HOH A 154 354 354 HOH HOH . E 4 HOH A 155 355 355 HOH HOH . E 4 HOH A 156 356 356 HOH HOH . E 4 HOH A 157 357 357 HOH HOH . E 4 HOH A 158 358 358 HOH HOH . E 4 HOH A 159 359 359 HOH HOH . E 4 HOH A 160 360 360 HOH HOH . E 4 HOH A 161 361 361 HOH HOH . E 4 HOH A 162 362 362 HOH HOH . E 4 HOH A 163 363 363 HOH HOH . E 4 HOH A 164 364 364 HOH HOH . E 4 HOH A 165 365 365 HOH HOH . E 4 HOH A 166 366 366 HOH HOH . E 4 HOH A 167 367 367 HOH HOH . E 4 HOH A 168 368 368 HOH HOH . E 4 HOH A 169 369 369 HOH HOH . E 4 HOH A 170 370 370 HOH HOH . E 4 HOH A 171 371 371 HOH HOH . E 4 HOH A 172 372 372 HOH HOH . E 4 HOH A 173 373 373 HOH HOH . E 4 HOH A 174 374 374 HOH HOH . E 4 HOH A 175 375 375 HOH HOH . E 4 HOH A 176 376 376 HOH HOH . E 4 HOH A 177 377 377 HOH HOH . E 4 HOH A 178 378 378 HOH HOH . E 4 HOH A 179 379 379 HOH HOH . E 4 HOH A 180 380 380 HOH HOH . E 4 HOH A 181 381 381 HOH HOH . E 4 HOH A 182 382 382 HOH HOH . E 4 HOH A 183 383 383 HOH HOH . E 4 HOH A 184 384 384 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 BDF . . . B 2 36.749 16.964 18.351 1 13.52 ? C1 BDF 115 A 1 HETATM 2 C C2 BDF . . . B 2 37.729 16.159 19.431 1 6.94 ? C2 BDF 115 A 1 HETATM 3 C C3 BDF . . . B 2 37.151 15.133 20.395 1 10.64 ? C3 BDF 115 A 1 HETATM 4 C C4 BDF . . . B 2 38.33 14.756 21.398 1 6.61 ? C4 BDF 115 A 1 HETATM 5 C C5 BDF . . . B 2 38.969 15.892 22.164 1 8.06 ? C5 BDF 115 A 1 HETATM 6 C C6 BDF . . . B 2 39.345 16.99 21.141 1 8 ? C6 BDF 115 A 1 HETATM 7 O O1 BDF . . . B 2 37.505 17.774 17.368 1 9.62 ? O1 BDF 115 A 1 HETATM 8 O O2 BDF . . . B 2 38.803 15.579 18.842 1 9.82 ? O2 BDF 115 A 1 HETATM 9 O O3 BDF . . . B 2 36.699 13.925 19.668 1 9.63 ? O3 BDF 115 A 1 HETATM 10 O O4 BDF . . . B 2 38.02 13.711 22.272 1 6.89 ? O4 BDF 115 A 1 HETATM 11 O O5 BDF . . . B 2 37.99 16.253 23.218 1 8.56 ? O5 BDF 115 A 1 HETATM 12 O O6 BDF . . . B 2 38.198 17.232 20.294 1 8.65 ? O6 BDF 115 A 1 # _model_server_stats.io_time_ms 50 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 12 #