data_1OWD # _model_server_result.job_id neu40UMQd4h0n8AP0Zdm4Q _model_server_result.datetime_utc '2024-11-28 23:29:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1owd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1001}' # _entry.id 1OWD # _exptl.entry_id 1OWD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 372.463 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 6-[AMINO(IMINO)METHYL]-N-[(4R)-4-ETHYL-1,2,3,4-TETRAHYDROISOQUINOLIN-6-YL]-2-NAPHTHAMIDE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1OWD _cell.length_a 55.16 _cell.length_b 53 _cell.length_c 82.3 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1OWD _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 31 A CYS 30 1_555 A SG CYS 47 A CYS 46 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? disulf ? disulf2 A SG CYS 39 A CYS 38 1_555 A SG CYS 110 A CYS 109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf3 A SG CYS 135 A CYS 134 1_555 A SG CYS 204 A CYS 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf4 A SG CYS 167 A CYS 166 1_555 A SG CYS 183 A CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf5 A SG CYS 194 A CYS 193 1_555 A SG CYS 222 A CYS 221 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? # _chem_comp.formula 'C23 H24 N4 O' _chem_comp.formula_weight 372.463 _chem_comp.id 497 _chem_comp.mon_nstd_flag . _chem_comp.name 6-[AMINO(IMINO)METHYL]-N-[(4R)-4-ETHYL-1,2,3,4-TETRAHYDROISOQUINOLIN-6-YL]-2-NAPHTHAMIDE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 6-[N-(4-ETHYL-1,2,3,4-TETRAHYDRO-6-ISOQUINOLINYL)CARBAMYL]-2-NAPHTHALENECARBOXAMIDINE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C47 C45 497 sing 1 n n C47 H471 497 sing 2 n n C47 H472 497 sing 3 n n C47 H473 497 sing 4 n n C45 C39 497 sing 5 n n C45 H451 497 sing 6 n n C45 H452 497 sing 7 n n C39 C38 497 sing 8 n n C39 C27 497 sing 9 n n C39 H39 497 sing 10 n n C38 N37 497 sing 11 n n C38 H381 497 sing 12 n n C38 H382 497 sing 13 n n N37 C36 497 sing 14 n n N37 H37 497 sing 15 n n C36 C26 497 sing 16 n n C36 H361 497 sing 17 n n C36 H362 497 sing 18 n n C26 C27 497 doub 19 n y C26 C25 497 sing 20 n y C27 C28 497 sing 21 n y C28 C22 497 doub 22 n y C28 H28 497 sing 23 n n C22 N21 497 sing 24 n n C22 C24 497 sing 25 n y N21 C20 497 sing 26 n n N21 H21 497 sing 27 n n C20 O23 497 doub 28 n n C20 C11 497 sing 29 n n C11 C12 497 doub 30 n y C11 C10 497 sing 31 n y C12 C13 497 sing 32 n y C12 H12 497 sing 33 n n C13 C4 497 doub 34 n y C13 H13 497 sing 35 n n C4 C5 497 sing 36 n y C4 C3 497 sing 37 n y C5 C6 497 doub 38 n y C5 H5 497 sing 39 n n C6 C1 497 sing 40 n y C6 C17 497 sing 41 n n C1 C2 497 doub 42 n y C1 H1 497 sing 43 n n C2 C3 497 sing 44 n y C2 H2 497 sing 45 n n C3 C10 497 doub 46 n y C10 H10 497 sing 47 n n C17 N18 497 sing 48 n n C17 N19 497 doub 49 n n N18 H181 497 sing 50 n n N18 H182 497 sing 51 n n N19 H19 497 sing 52 n n C24 C25 497 doub 53 n y C24 H24 497 sing 54 n n C25 H25 497 sing 55 n n # _atom_sites.entry_id 1OWD _atom_sites.fract_transf_matrix[1][1] 0.018129 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018868 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012151 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 497 A 1 1001 1 497 497 . C 3 HOH A 1 1002 1 HOH HOH . C 3 HOH A 2 1003 2 HOH HOH . C 3 HOH A 3 1004 3 HOH HOH . C 3 HOH A 4 1005 4 HOH HOH . C 3 HOH A 5 1006 5 HOH HOH . C 3 HOH A 6 1007 6 HOH HOH . C 3 HOH A 7 1008 7 HOH HOH . C 3 HOH A 8 1009 8 HOH HOH . C 3 HOH A 9 1010 9 HOH HOH . C 3 HOH A 10 1011 10 HOH HOH . C 3 HOH A 11 1012 11 HOH HOH . C 3 HOH A 12 1013 12 HOH HOH . C 3 HOH A 13 1014 13 HOH HOH . C 3 HOH A 14 1015 14 HOH HOH . C 3 HOH A 15 1016 15 HOH HOH . C 3 HOH A 16 1017 16 HOH HOH . C 3 HOH A 17 1018 17 HOH HOH . C 3 HOH A 18 1019 18 HOH HOH . C 3 HOH A 19 1020 19 HOH HOH . C 3 HOH A 20 1021 20 HOH HOH . C 3 HOH A 21 1022 21 HOH HOH . C 3 HOH A 22 1023 22 HOH HOH . C 3 HOH A 23 1024 23 HOH HOH . C 3 HOH A 24 1025 24 HOH HOH . C 3 HOH A 25 1026 25 HOH HOH . C 3 HOH A 26 1027 26 HOH HOH . C 3 HOH A 27 1028 27 HOH HOH . C 3 HOH A 28 1029 28 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C47 497 . . . B 2 29.961 10.51 33.511 1 23.55 ? C47 497 1001 A 1 HETATM 2 C C45 497 . . . B 2 28.519 10.844 33.159 1 23.55 ? C45 497 1001 A 1 HETATM 3 C C39 497 . . . B 2 28.361 10.962 31.653 1 23.55 ? C39 497 1001 A 1 HETATM 4 C C38 497 . . . B 2 28.824 9.82 30.737 1 23.55 ? C38 497 1001 A 1 HETATM 5 N N37 497 . . . B 2 29.218 10.403 29.448 1 23.55 ? N37 497 1001 A 1 HETATM 6 C C36 497 . . . B 2 28.246 11.259 28.748 1 23.55 ? C36 497 1001 A 1 HETATM 7 C C26 497 . . . B 2 27.331 12.062 29.656 1 23.55 ? C26 497 1001 A 1 HETATM 8 C C27 497 . . . B 2 27.254 11.797 31.055 1 23.55 ? C27 497 1001 A 1 HETATM 9 C C28 497 . . . B 2 26.189 12.34 31.804 1 23.55 ? C28 497 1001 A 1 HETATM 10 C C22 497 . . . B 2 25.352 13.314 31.213 1 23.55 ? C22 497 1001 A 1 HETATM 11 N N21 497 . . . B 2 24.276 13.891 31.834 1 23.55 ? N21 497 1001 A 1 HETATM 12 C C20 497 . . . B 2 24.375 14.638 32.938 1 23.55 ? C20 497 1001 A 1 HETATM 13 O O23 497 . . . B 2 25.329 14.467 33.66 1 23.55 ? O23 497 1001 A 1 HETATM 14 C C11 497 . . . B 2 23.322 15.659 33.228 1 23.55 ? C11 497 1001 A 1 HETATM 15 C C12 497 . . . B 2 23.651 16.719 34.118 1 23.55 ? C12 497 1001 A 1 HETATM 16 C C13 497 . . . B 2 22.705 17.695 34.479 1 23.55 ? C13 497 1001 A 1 HETATM 17 C C4 497 . . . B 2 21.401 17.664 33.927 1 23.55 ? C4 497 1001 A 1 HETATM 18 C C5 497 . . . B 2 20.495 18.721 34.149 1 23.55 ? C5 497 1001 A 1 HETATM 19 C C6 497 . . . B 2 19.205 18.723 33.572 1 23.55 ? C6 497 1001 A 1 HETATM 20 C C1 497 . . . B 2 18.877 17.714 32.636 1 23.55 ? C1 497 1001 A 1 HETATM 21 C C2 497 . . . B 2 19.793 16.679 32.373 1 23.55 ? C2 497 1001 A 1 HETATM 22 C C3 497 . . . B 2 21.059 16.636 33.003 1 23.55 ? C3 497 1001 A 1 HETATM 23 C C10 497 . . . B 2 22.014 15.632 32.669 1 23.55 ? C10 497 1001 A 1 HETATM 24 C C17 497 . . . B 2 18.211 19.735 33.989 1 23.55 ? C17 497 1001 A 1 HETATM 25 N N18 497 . . . B 2 18.588 20.929 34.408 1 23.55 ? N18 497 1001 A 1 HETATM 26 N N19 497 . . . B 2 16.924 19.496 33.978 1 23.55 ? N19 497 1001 A 1 HETATM 27 C C24 497 . . . B 2 25.606 13.723 29.897 1 23.55 ? C24 497 1001 A 1 HETATM 28 C C25 497 . . . B 2 26.544 13.083 29.089 1 23.55 ? C25 497 1001 A 1 # _model_server_stats.io_time_ms 49 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 291 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 28 #