data_1OWI # _model_server_result.job_id Ct5wC7Z14JOhiT9yVYo1qg _model_server_result.datetime_utc '2024-11-25 09:33:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1owi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":245}' # _entry.id 1OWI # _exptl.entry_id 1OWI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 373.448 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 6-[(Z)-AMINO(IMINO)METHYL]-N-[3-(CYCLOPENTYLOXY)PHENYL]-2-NAPHTHAMIDE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1OWI _cell.length_a 55.16 _cell.length_b 53 _cell.length_c 82.3 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1OWI _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 31 A CYS 30 1_555 A SG CYS 47 A CYS 46 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf2 A SG CYS 39 A CYS 38 1_555 A SG CYS 110 A CYS 109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf3 A SG CYS 135 A CYS 134 1_555 A SG CYS 204 A CYS 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf4 A SG CYS 167 A CYS 166 1_555 A SG CYS 183 A CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf5 A SG CYS 194 A CYS 193 1_555 A SG CYS 222 A CYS 221 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? # _chem_comp.formula 'C23 H23 N3 O2' _chem_comp.formula_weight 373.448 _chem_comp.id 426 _chem_comp.mon_nstd_flag . _chem_comp.name 6-[(Z)-AMINO(IMINO)METHYL]-N-[3-(CYCLOPENTYLOXY)PHENYL]-2-NAPHTHAMIDE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 6-[N-(3-CYCLOPENTYLOXYPHENYL)CARBAMYL]-2-NAPHTHALENECARBOXAMIDINE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N18 C17 426 doub 1 z n N18 H18 426 sing 2 n n C17 N19 426 sing 3 n n C17 C4 426 sing 4 n n N19 H191 426 sing 5 n n N19 H192 426 sing 6 n n C4 C5 426 doub 7 n y C4 C3 426 sing 8 n y C5 C6 426 sing 9 n y C5 H5 426 sing 10 n n C6 C10 426 doub 11 n y C6 C1 426 sing 12 n y C10 C11 426 sing 13 n y C10 H10 426 sing 14 n n C11 C12 426 doub 15 n y C11 H11 426 sing 16 n n C12 C13 426 sing 17 n y C12 C20 426 sing 18 n n C13 C1 426 doub 19 n y C13 H13 426 sing 20 n n C1 C2 426 sing 21 n y C2 C3 426 doub 22 n y C2 H2 426 sing 23 n n C3 H3 426 sing 24 n n C20 O23 426 doub 25 n n C20 N21 426 sing 26 n n N21 C22 426 sing 27 n n N21 H21 426 sing 28 n n C22 C28 426 doub 29 n y C22 C24 426 sing 30 n y C28 C27 426 sing 31 n y C28 H28 426 sing 32 n n C27 C26 426 doub 33 n y C27 H27 426 sing 34 n n C26 C25 426 sing 35 n y C26 H26 426 sing 36 n n C25 O33 426 sing 37 n n C25 C24 426 doub 38 n y O33 C34 426 sing 39 n n C34 C38 426 sing 40 n n C34 C35 426 sing 41 n n C34 H34 426 sing 42 n n C38 C37 426 sing 43 n n C38 H381 426 sing 44 n n C38 H382 426 sing 45 n n C37 C36 426 sing 46 n n C37 H371 426 sing 47 n n C37 H372 426 sing 48 n n C36 C35 426 sing 49 n n C36 H361 426 sing 50 n n C36 H362 426 sing 51 n n C35 H351 426 sing 52 n n C35 H352 426 sing 53 n n C24 H24 426 sing 54 n n # _atom_sites.entry_id 1OWI _atom_sites.fract_transf_matrix[1][1] 0.018129 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018868 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012151 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id 426 _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 245 _pdbx_nonpoly_scheme.auth_seq_num 1 _pdbx_nonpoly_scheme.pdb_mon_id 426 _pdbx_nonpoly_scheme.auth_mon_id 426 _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N18 426 . . . B 2 17.146 19.563 34.033 1 12.96 ? N18 426 245 A 1 HETATM 2 C C17 426 . . . B 2 18.437 19.674 34.09 1 14.1 ? C17 426 245 A 1 HETATM 3 N N19 426 . . . B 2 18.967 20.855 34.439 1 11.93 ? N19 426 245 A 1 HETATM 4 C C4 426 . . . B 2 19.293 18.541 33.732 1 16.61 ? C4 426 245 A 1 HETATM 5 C C5 426 . . . B 2 20.619 18.502 34.291 1 17.32 ? C5 426 245 A 1 HETATM 6 C C6 426 . . . B 2 21.579 17.516 33.925 1 17.06 ? C6 426 245 A 1 HETATM 7 C C10 426 . . . B 2 22.878 17.55 34.509 1 17.26 ? C10 426 245 A 1 HETATM 8 C C11 426 . . . B 2 23.884 16.604 34.153 1 18.53 ? C11 426 245 A 1 HETATM 9 C C12 426 . . . B 2 23.6 15.592 33.182 1 19.12 ? C12 426 245 A 1 HETATM 10 C C13 426 . . . B 2 22.262 15.551 32.584 1 19.07 ? C13 426 245 A 1 HETATM 11 C C1 426 . . . B 2 21.232 16.498 32.941 1 17.97 ? C1 426 245 A 1 HETATM 12 C C2 426 . . . B 2 19.886 16.522 32.39 1 18.12 ? C2 426 245 A 1 HETATM 13 C C3 426 . . . B 2 18.906 17.52 32.771 1 16.54 ? C3 426 245 A 1 HETATM 14 C C20 426 . . . B 2 24.72 14.682 32.855 1 19.52 ? C20 426 245 A 1 HETATM 15 O O23 426 . . . B 2 25.697 14.593 33.581 1 17.34 ? O23 426 245 A 1 HETATM 16 N N21 426 . . . B 2 24.613 13.959 31.698 1 22.13 ? N21 426 245 A 1 HETATM 17 C C22 426 . . . B 2 25.579 13.124 31.196 1 22.61 ? C22 426 245 A 1 HETATM 18 C C28 426 . . . B 2 25.928 11.91 31.825 1 23.89 ? C28 426 245 A 1 HETATM 19 C C27 426 . . . B 2 26.933 11.085 31.278 1 23.72 ? C27 426 245 A 1 HETATM 20 C C26 426 . . . B 2 27.579 11.464 30.096 1 23.76 ? C26 426 245 A 1 HETATM 21 C C25 426 . . . B 2 27.235 12.681 29.458 1 23.85 ? C25 426 245 A 1 HETATM 22 O O33 426 . . . B 2 27.842 13.225 28.315 1 25.41 ? O33 426 245 A 1 HETATM 23 C C34 426 . . . B 2 28.588 12.339 27.478 1 26.15 ? C34 426 245 A 1 HETATM 24 C C38 426 . . . B 2 27.836 12.137 26.128 1 25.7 ? C38 426 245 A 1 HETATM 25 C C37 426 . . . B 2 28.673 12.834 25.047 1 25.1 ? C37 426 245 A 1 HETATM 26 C C36 426 . . . B 2 29.97 13.38 25.714 1 24.65 ? C36 426 245 A 1 HETATM 27 C C35 426 . . . B 2 29.999 12.922 27.193 1 25.35 ? C35 426 245 A 1 HETATM 28 C C24 426 . . . B 2 26.231 13.486 30.012 1 22.9 ? C24 426 245 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 28 #