data_1OYB # _model_server_result.job_id 1X89j17KhdjfIzvyfNjl5g _model_server_result.datetime_utc '2024-11-27 12:12:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1oyb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 1OYB # _exptl.entry_id 1OYB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 122.121 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description P-HYDROXYBENZALDEHYDE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1OYB _cell.length_a 142.88 _cell.length_b 142.88 _cell.length_c 43.01 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1OYB _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_556 y,x,-z+1 0 1 0 1 0 0 0 0 -1 0 0 43.01 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C7 H6 O2' _chem_comp.formula_weight 122.121 _chem_comp.id HBA _chem_comp.mon_nstd_flag . _chem_comp.name P-HYDROXYBENZALDEHYDE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1' O1' HBA doub 170 n n C1' C1 HBA sing 171 n n C1' H1' HBA sing 172 n n C1 C2 HBA sing 173 n y C1 C6 HBA doub 174 n y C2 C3 HBA doub 175 n y C2 H2 HBA sing 176 n n C3 C4 HBA sing 177 n y C3 H3 HBA sing 178 n n C4 C5 HBA doub 179 n y C4 O4 HBA sing 180 n n C5 C6 HBA sing 181 n y C5 H5 HBA sing 182 n n C6 H6 HBA sing 183 n n O4 HO4 HBA sing 184 n n # _atom_sites.entry_id 1OYB _atom_sites.fract_transf_matrix[1][1] 0.006999 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006999 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.02325 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FMN A 1 401 401 FMN FMN . C 3 HBA A 1 402 402 HBA HBA . D 4 HOH A 1 501 501 HOH HOH . D 4 HOH A 2 502 502 HOH HOH . D 4 HOH A 3 504 504 HOH HOH . D 4 HOH A 4 505 505 HOH HOH . D 4 HOH A 5 506 506 HOH HOH . D 4 HOH A 6 507 507 HOH HOH . D 4 HOH A 7 508 508 HOH HOH . D 4 HOH A 8 509 509 HOH HOH . D 4 HOH A 9 510 510 HOH HOH . D 4 HOH A 10 511 511 HOH HOH . D 4 HOH A 11 512 512 HOH HOH . D 4 HOH A 12 514 514 HOH HOH . D 4 HOH A 13 515 515 HOH HOH . D 4 HOH A 14 516 516 HOH HOH . D 4 HOH A 15 518 518 HOH HOH . D 4 HOH A 16 519 519 HOH HOH . D 4 HOH A 17 520 520 HOH HOH . D 4 HOH A 18 522 522 HOH HOH . D 4 HOH A 19 523 523 HOH HOH . D 4 HOH A 20 524 524 HOH HOH . D 4 HOH A 21 525 525 HOH HOH . D 4 HOH A 22 526 526 HOH HOH . D 4 HOH A 23 527 527 HOH HOH . D 4 HOH A 24 531 531 HOH HOH . D 4 HOH A 25 533 533 HOH HOH . D 4 HOH A 26 534 534 HOH HOH . D 4 HOH A 27 535 535 HOH HOH . D 4 HOH A 28 536 536 HOH HOH . D 4 HOH A 29 537 537 HOH HOH . D 4 HOH A 30 538 538 HOH HOH . D 4 HOH A 31 539 539 HOH HOH . D 4 HOH A 32 540 540 HOH HOH . D 4 HOH A 33 541 541 HOH HOH . D 4 HOH A 34 542 542 HOH HOH . D 4 HOH A 35 543 543 HOH HOH . D 4 HOH A 36 544 544 HOH HOH . D 4 HOH A 37 545 545 HOH HOH . D 4 HOH A 38 546 546 HOH HOH . D 4 HOH A 39 547 547 HOH HOH . D 4 HOH A 40 548 548 HOH HOH . D 4 HOH A 41 549 549 HOH HOH . D 4 HOH A 42 550 550 HOH HOH . D 4 HOH A 43 551 551 HOH HOH . D 4 HOH A 44 552 552 HOH HOH . D 4 HOH A 45 553 553 HOH HOH . D 4 HOH A 46 554 554 HOH HOH . D 4 HOH A 47 555 555 HOH HOH . D 4 HOH A 48 556 556 HOH HOH . D 4 HOH A 49 557 557 HOH HOH . D 4 HOH A 50 558 558 HOH HOH . D 4 HOH A 51 559 559 HOH HOH . D 4 HOH A 52 560 560 HOH HOH . D 4 HOH A 53 562 562 HOH HOH . D 4 HOH A 54 563 563 HOH HOH . D 4 HOH A 55 564 564 HOH HOH . D 4 HOH A 56 565 565 HOH HOH . D 4 HOH A 57 566 566 HOH HOH . D 4 HOH A 58 568 568 HOH HOH . D 4 HOH A 59 569 569 HOH HOH . D 4 HOH A 60 570 570 HOH HOH . D 4 HOH A 61 571 571 HOH HOH . D 4 HOH A 62 573 573 HOH HOH . D 4 HOH A 63 574 574 HOH HOH . D 4 HOH A 64 575 575 HOH HOH . D 4 HOH A 65 577 577 HOH HOH . D 4 HOH A 66 578 578 HOH HOH . D 4 HOH A 67 580 580 HOH HOH . D 4 HOH A 68 581 581 HOH HOH . D 4 HOH A 69 583 583 HOH HOH . D 4 HOH A 70 584 584 HOH HOH . D 4 HOH A 71 585 585 HOH HOH . D 4 HOH A 72 586 586 HOH HOH . D 4 HOH A 73 587 587 HOH HOH . D 4 HOH A 74 588 588 HOH HOH . D 4 HOH A 75 589 589 HOH HOH . D 4 HOH A 76 590 590 HOH HOH . D 4 HOH A 77 591 591 HOH HOH . D 4 HOH A 78 592 592 HOH HOH . D 4 HOH A 79 600 600 HOH HOH . D 4 HOH A 80 603 603 HOH HOH . D 4 HOH A 81 604 604 HOH HOH . D 4 HOH A 82 605 605 HOH HOH . D 4 HOH A 83 606 606 HOH HOH . D 4 HOH A 84 607 607 HOH HOH . D 4 HOH A 85 608 608 HOH HOH . D 4 HOH A 86 609 609 HOH HOH . D 4 HOH A 87 611 611 HOH HOH . D 4 HOH A 88 612 612 HOH HOH . D 4 HOH A 89 613 613 HOH HOH . D 4 HOH A 90 614 614 HOH HOH . D 4 HOH A 91 615 615 HOH HOH . D 4 HOH A 92 616 616 HOH HOH . D 4 HOH A 93 619 619 HOH HOH . D 4 HOH A 94 621 621 HOH HOH . D 4 HOH A 95 622 622 HOH HOH . D 4 HOH A 96 623 623 HOH HOH . D 4 HOH A 97 624 624 HOH HOH . D 4 HOH A 98 627 627 HOH HOH . D 4 HOH A 99 628 628 HOH HOH . D 4 HOH A 100 630 630 HOH HOH . D 4 HOH A 101 631 631 HOH HOH . D 4 HOH A 102 632 632 HOH HOH . D 4 HOH A 103 633 633 HOH HOH . D 4 HOH A 104 634 634 HOH HOH . D 4 HOH A 105 635 635 HOH HOH . D 4 HOH A 106 637 637 HOH HOH . D 4 HOH A 107 638 638 HOH HOH . D 4 HOH A 108 639 639 HOH HOH . D 4 HOH A 109 640 640 HOH HOH . D 4 HOH A 110 641 641 HOH HOH . D 4 HOH A 111 643 643 HOH HOH . D 4 HOH A 112 644 644 HOH HOH . D 4 HOH A 113 645 645 HOH HOH . D 4 HOH A 114 646 646 HOH HOH . D 4 HOH A 115 647 647 HOH HOH . D 4 HOH A 116 648 648 HOH HOH . D 4 HOH A 117 649 649 HOH HOH . D 4 HOH A 118 650 650 HOH HOH . D 4 HOH A 119 651 651 HOH HOH . D 4 HOH A 120 652 652 HOH HOH . D 4 HOH A 121 654 654 HOH HOH . D 4 HOH A 122 655 655 HOH HOH . D 4 HOH A 123 656 656 HOH HOH . D 4 HOH A 124 657 657 HOH HOH . D 4 HOH A 125 659 659 HOH HOH . D 4 HOH A 126 660 660 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1' HBA . . . C 3 32.884 72.112 18.437 1 13.91 ? C1' HBA 402 A 1 HETATM 2 O O1' HBA . . . C 3 32.21 71.477 17.598 1 17.81 ? O1' HBA 402 A 1 HETATM 3 C C1 HBA . . . C 3 34.041 71.51 18.914 1 10.74 ? C1 HBA 402 A 1 HETATM 4 C C2 HBA . . . C 3 34.726 72.184 19.885 1 9.33 ? C2 HBA 402 A 1 HETATM 5 C C3 HBA . . . C 3 35.811 71.625 20.497 1 9.35 ? C3 HBA 402 A 1 HETATM 6 C C4 HBA . . . C 3 36.229 70.372 20.115 1 11.05 ? C4 HBA 402 A 1 HETATM 7 C C5 HBA . . . C 3 35.569 69.677 19.118 1 9.45 ? C5 HBA 402 A 1 HETATM 8 C C6 HBA . . . C 3 34.461 70.239 18.513 1 8.19 ? C6 HBA 402 A 1 HETATM 9 O O4 HBA . . . C 3 37.152 69.876 20.79 1 14.02 ? O4 HBA 402 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 244 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 9 #