data_1OYF # _model_server_result.job_id M31PhPexcy-I9XuPN78oYA _model_server_result.datetime_utc '2024-10-14 10:20:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1oyf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1001}' # _entry.id 1OYF # _exptl.entry_id 1OYF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 130.228 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 6-METHYLHEPTAN-1-OL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1OYF _cell.length_a 45.866 _cell.length_b 69.071 _cell.length_c 75.646 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1OYF _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 26 A CYS 27 1_555 A SG CYS 115 A CYS 126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf2 A SG CYS 28 A CYS 29 1_555 A SG CYS 44 A CYS 45 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf3 A SG CYS 43 A CYS 44 1_555 A SG CYS 95 A CYS 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.995 ? disulf ? disulf4 A SG CYS 49 A CYS 50 1_555 A SG CYS 121 A CYS 133 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.16 ? disulf ? disulf5 A SG CYS 50 A CYS 51 1_555 A SG CYS 88 A CYS 98 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? disulf ? disulf6 A SG CYS 57 A CYS 61 1_555 A SG CYS 81 A CYS 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf7 A SG CYS 75 A CYS 84 1_555 A SG CYS 86 A CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf8 B SG CYS 26 B CYS 27 1_555 B SG CYS 115 B CYS 126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? disulf ? disulf9 B SG CYS 28 B CYS 29 1_555 B SG CYS 44 B CYS 45 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf10 B SG CYS 43 B CYS 44 1_555 B SG CYS 95 B CYS 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf11 B SG CYS 49 B CYS 50 1_555 B SG CYS 121 B CYS 133 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf12 B SG CYS 50 B CYS 51 1_555 B SG CYS 88 B CYS 98 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf13 B SG CYS 57 B CYS 61 1_555 B SG CYS 81 B CYS 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf14 B SG CYS 75 B CYS 84 1_555 B SG CYS 86 B CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? # _chem_comp.formula 'C8 H18 O' _chem_comp.formula_weight 130.228 _chem_comp.id MHN _chem_comp.mon_nstd_flag . _chem_comp.name 6-METHYLHEPTAN-1-OL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'METHYL HEPTANOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C8 MHN sing 244 n n O1 HO1 MHN sing 245 n n C8 C7 MHN sing 246 n n C8 H81 MHN sing 247 n n C8 H82 MHN sing 248 n n C7 C6 MHN sing 249 n n C7 H71 MHN sing 250 n n C7 H72 MHN sing 251 n n C6 C5 MHN sing 252 n n C6 H61 MHN sing 253 n n C6 H62 MHN sing 254 n n C5 C4 MHN sing 255 n n C5 H51 MHN sing 256 n n C5 H52 MHN sing 257 n n C4 C2 MHN sing 258 n n C4 H41 MHN sing 259 n n C4 H42 MHN sing 260 n n C2 C1 MHN sing 261 n n C2 C3 MHN sing 262 n n C2 H2 MHN sing 263 n n C1 H11 MHN sing 264 n n C1 H12 MHN sing 265 n n C1 H13 MHN sing 266 n n C3 H31 MHN sing 267 n n C3 H32 MHN sing 268 n n C3 H33 MHN sing 269 n n # _atom_sites.entry_id 1OYF _atom_sites.fract_transf_matrix[1][1] 0.021803 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014478 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013219 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 SO4 A 1 2001 1 SO4 SO4 . D 4 MHN A 1 1001 1 MHN CSP . E 5 ACY A 1 3001 1 ACY ACY . F 4 MHN B 1 1002 2 MHN CSP . G 6 HOH A 1 3002 1 HOH HOH . G 6 HOH A 2 3003 2 HOH HOH . G 6 HOH A 3 3004 4 HOH HOH . G 6 HOH A 4 3005 6 HOH HOH . G 6 HOH A 5 3006 7 HOH HOH . G 6 HOH A 6 3007 8 HOH HOH . G 6 HOH A 7 3008 9 HOH HOH . G 6 HOH A 8 3009 11 HOH HOH . G 6 HOH A 9 3010 12 HOH HOH . G 6 HOH A 10 3011 13 HOH HOH . G 6 HOH A 11 3012 14 HOH HOH . G 6 HOH A 12 3013 15 HOH HOH . G 6 HOH A 13 3014 16 HOH HOH . G 6 HOH A 14 3015 18 HOH HOH . G 6 HOH A 15 3016 19 HOH HOH . G 6 HOH A 16 3017 20 HOH HOH . G 6 HOH A 17 3018 21 HOH HOH . G 6 HOH A 18 3019 22 HOH HOH . G 6 HOH A 19 3020 23 HOH HOH . G 6 HOH A 20 3021 24 HOH HOH . G 6 HOH A 21 3022 25 HOH HOH . G 6 HOH A 22 3023 26 HOH HOH . G 6 HOH A 23 3024 27 HOH HOH . G 6 HOH A 24 3025 28 HOH HOH . G 6 HOH A 25 3026 29 HOH HOH . G 6 HOH A 26 3027 30 HOH HOH . G 6 HOH A 27 3028 31 HOH HOH . G 6 HOH A 28 3029 32 HOH HOH . G 6 HOH A 29 3030 33 HOH HOH . G 6 HOH A 30 3031 34 HOH HOH . G 6 HOH A 31 3032 35 HOH HOH . G 6 HOH A 32 3033 36 HOH HOH . G 6 HOH A 33 3034 37 HOH HOH . G 6 HOH A 34 3035 64 HOH HOH . G 6 HOH A 35 3036 66 HOH HOH . G 6 HOH A 36 3037 68 HOH HOH . G 6 HOH A 37 3038 69 HOH HOH . G 6 HOH A 38 3039 70 HOH HOH . G 6 HOH A 39 3040 71 HOH HOH . G 6 HOH A 40 3041 73 HOH HOH . G 6 HOH A 41 3042 74 HOH HOH . G 6 HOH A 42 3043 77 HOH HOH . G 6 HOH A 43 3044 78 HOH HOH . G 6 HOH A 44 3045 79 HOH HOH . G 6 HOH A 45 3046 80 HOH HOH . G 6 HOH A 46 3047 81 HOH HOH . G 6 HOH A 47 3048 82 HOH HOH . G 6 HOH A 48 3049 83 HOH HOH . G 6 HOH A 49 3050 84 HOH HOH . G 6 HOH A 50 3051 85 HOH HOH . G 6 HOH A 51 3052 97 HOH HOH . G 6 HOH A 52 3053 98 HOH HOH . G 6 HOH A 53 3054 100 HOH HOH . G 6 HOH A 54 3055 101 HOH HOH . G 6 HOH A 55 3056 102 HOH HOH . G 6 HOH A 56 3057 103 HOH HOH . G 6 HOH A 57 3058 105 HOH HOH . G 6 HOH A 58 3059 108 HOH HOH . G 6 HOH A 59 3060 109 HOH HOH . G 6 HOH A 60 3061 110 HOH HOH . G 6 HOH A 61 3062 111 HOH HOH . G 6 HOH A 62 3063 112 HOH HOH . G 6 HOH A 63 3064 113 HOH HOH . G 6 HOH A 64 3065 114 HOH HOH . G 6 HOH A 65 3066 116 HOH HOH . G 6 HOH A 66 3067 117 HOH HOH . G 6 HOH A 67 3068 118 HOH HOH . G 6 HOH A 68 3069 119 HOH HOH . G 6 HOH A 69 3070 120 HOH HOH . G 6 HOH A 70 3071 121 HOH HOH . G 6 HOH A 71 3072 122 HOH HOH . G 6 HOH A 72 3073 125 HOH HOH . G 6 HOH A 73 3074 134 HOH HOH . G 6 HOH A 74 3075 140 HOH HOH . G 6 HOH A 75 3076 143 HOH HOH . G 6 HOH A 76 3077 144 HOH HOH . H 6 HOH B 1 1003 3 HOH HOH . H 6 HOH B 2 1004 5 HOH HOH . H 6 HOH B 3 1005 10 HOH HOH . H 6 HOH B 4 1006 17 HOH HOH . H 6 HOH B 5 1007 38 HOH HOH . H 6 HOH B 6 1008 39 HOH HOH . H 6 HOH B 7 1009 40 HOH HOH . H 6 HOH B 8 1010 41 HOH HOH . H 6 HOH B 9 1011 42 HOH HOH . H 6 HOH B 10 1012 43 HOH HOH . H 6 HOH B 11 1013 44 HOH HOH . H 6 HOH B 12 1014 45 HOH HOH . H 6 HOH B 13 1015 46 HOH HOH . H 6 HOH B 14 1016 47 HOH HOH . H 6 HOH B 15 1017 48 HOH HOH . H 6 HOH B 16 1018 49 HOH HOH . H 6 HOH B 17 1019 50 HOH HOH . H 6 HOH B 18 1020 51 HOH HOH . H 6 HOH B 19 1021 52 HOH HOH . H 6 HOH B 20 1022 53 HOH HOH . H 6 HOH B 21 1023 54 HOH HOH . H 6 HOH B 22 1024 55 HOH HOH . H 6 HOH B 23 1025 56 HOH HOH . H 6 HOH B 24 1026 57 HOH HOH . H 6 HOH B 25 1027 58 HOH HOH . H 6 HOH B 26 1028 59 HOH HOH . H 6 HOH B 27 1029 60 HOH HOH . H 6 HOH B 28 1030 61 HOH HOH . H 6 HOH B 29 1031 62 HOH HOH . H 6 HOH B 30 1032 63 HOH HOH . H 6 HOH B 31 1033 65 HOH HOH . H 6 HOH B 32 1034 67 HOH HOH . H 6 HOH B 33 1035 72 HOH HOH . H 6 HOH B 34 1036 75 HOH HOH . H 6 HOH B 35 1037 76 HOH HOH . H 6 HOH B 36 1038 86 HOH HOH . H 6 HOH B 37 1039 87 HOH HOH . H 6 HOH B 38 1040 88 HOH HOH . H 6 HOH B 39 1041 89 HOH HOH . H 6 HOH B 40 1042 90 HOH HOH . H 6 HOH B 41 1043 91 HOH HOH . H 6 HOH B 42 1044 92 HOH HOH . H 6 HOH B 43 1045 93 HOH HOH . H 6 HOH B 44 1046 94 HOH HOH . H 6 HOH B 45 1047 95 HOH HOH . H 6 HOH B 46 1048 96 HOH HOH . H 6 HOH B 47 1049 99 HOH HOH . H 6 HOH B 48 1050 104 HOH HOH . H 6 HOH B 49 1051 106 HOH HOH . H 6 HOH B 50 1052 107 HOH HOH . H 6 HOH B 51 1053 115 HOH HOH . H 6 HOH B 52 1054 123 HOH HOH . H 6 HOH B 53 1055 124 HOH HOH . H 6 HOH B 54 1056 126 HOH HOH . H 6 HOH B 55 1057 127 HOH HOH . H 6 HOH B 56 1058 128 HOH HOH . H 6 HOH B 57 1059 129 HOH HOH . H 6 HOH B 58 1060 130 HOH HOH . H 6 HOH B 59 1061 131 HOH HOH . H 6 HOH B 60 1062 132 HOH HOH . H 6 HOH B 61 1063 133 HOH HOH . H 6 HOH B 62 1064 135 HOH HOH . H 6 HOH B 63 1065 136 HOH HOH . H 6 HOH B 64 1066 137 HOH HOH . H 6 HOH B 65 1067 138 HOH HOH . H 6 HOH B 66 1068 139 HOH HOH . H 6 HOH B 67 1069 141 HOH HOH . H 6 HOH B 68 1070 142 HOH HOH . H 6 HOH B 69 1071 145 HOH HOH . H 6 HOH B 70 1072 146 HOH HOH . H 6 HOH B 71 1073 147 HOH HOH . H 6 HOH B 72 1074 148 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 MHN . . . D 4 12.931 33.296 36.66 0.5 24.9 ? O1 MHN 1001 A 1 HETATM 2 C C8 MHN . . . D 4 13.916 32.251 36.475 0.5 20.53 ? C8 MHN 1001 A 1 HETATM 3 C C7 MHN . . . D 4 14.199 32.145 34.963 0.5 19.12 ? C7 MHN 1001 A 1 HETATM 4 C C6 MHN . . . D 4 15.254 31.062 34.626 0.5 15.7 ? C6 MHN 1001 A 1 HETATM 5 C C5 MHN . . . D 4 15.54 30.969 33.106 0.5 15.02 ? C5 MHN 1001 A 1 HETATM 6 C C4 MHN . . . D 4 16.629 29.884 32.786 0.5 13.6 ? C4 MHN 1001 A 1 HETATM 7 C C2 MHN . . . D 4 17.064 29.645 31.276 0.5 11.92 ? C2 MHN 1001 A 1 HETATM 8 C C1 MHN . . . D 4 15.896 29.971 30.283 0.5 8.73 ? C1 MHN 1001 A 1 HETATM 9 C C3 MHN . . . D 4 18.261 30.544 30.899 0.5 10.91 ? C3 MHN 1001 A 1 # _model_server_stats.io_time_ms 250 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 290 _model_server_stats.encode_time_ms 13 _model_server_stats.element_count 9 #