data_1OYY
#
_model_server_result.job_id            4y4myu-Ss0QWlsUJfOkyKw 
_model_server_result.datetime_utc      '2024-11-09 02:39:14' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1oyy 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":526}' 
#
_entry.id    1OYY 
#
_exptl.entry_id    1OYY 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              54.938 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MANGANESE (II) ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          110.78 
_cell.angle_gamma         90 
_cell.entry_id            1OYY 
_cell.length_a            66.591 
_cell.length_b            54.534 
_cell.length_c            78.686 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1OYY 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OE2 GLU 10 A GLU 10 1_555 C MN MN . A MN 525 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.341 ? 
metalc ? metalc2 A OE1 GLU 10 A GLU 10 1_555 C MN MN . A MN 525 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.507 ? 
metalc ? metalc3 A OD2 ASP 35 A ASP 35 1_555 C MN MN . A MN 525 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.245 ? 
metalc ? metalc4 A SG CYS 380 A CYS 380 1_555 B ZN ZN . A ZN 524 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.459 ? 
metalc ? metalc5 A SG CYS 397 A CYS 397 1_555 B ZN ZN . A ZN 524 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.389 ? 
metalc ? metalc6 A SG CYS 400 A CYS 400 1_555 B ZN ZN . A ZN 524 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.411 ? 
metalc ? metalc7 A SG CYS 403 A CYS 403 1_555 B ZN ZN . A ZN 524 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.384 ? 
metalc ? metalc8 D MN MN . A MN 526 1_555 E O2B AGS . A AGS 527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.432 ? 
metalc ? metalc9 D MN MN . A MN 526 1_555 F O HOH . A HOH 528 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.443 ? 
metalc ? metalc10 D MN MN . A MN 526 1_555 F O HOH . A HOH 529 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.237 ? 
metalc ? metalc11 D MN MN . A MN 526 1_555 F O HOH . A HOH 568 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.432 ? 
#
_chem_comp.formula           'Mn 2' 
_chem_comp.formula_weight    54.938 
_chem_comp.id                MN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MANGANESE (II) ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     1OYY 
_atom_sites.fract_transf_matrix[1][1]    0.015017 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.005698 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.018337 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013593 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ZN A 1 524 101 ZN ZN . 
C 3 MN A 1 525 102 MN MN . 
D 3 MN A 1 526 103 MN MN . 
E 4 AGS A 1 527 104 AGS AGS . 
F 5 HOH A 1 528 1 HOH WAT . 
F 5 HOH A 2 529 2 HOH WAT . 
F 5 HOH A 3 530 3 HOH WAT . 
F 5 HOH A 4 531 4 HOH WAT . 
F 5 HOH A 5 532 5 HOH WAT . 
F 5 HOH A 6 533 6 HOH WAT . 
F 5 HOH A 7 534 7 HOH WAT . 
F 5 HOH A 8 535 8 HOH WAT . 
F 5 HOH A 9 536 9 HOH WAT . 
F 5 HOH A 10 537 10 HOH WAT . 
F 5 HOH A 11 538 11 HOH WAT . 
F 5 HOH A 12 539 12 HOH WAT . 
F 5 HOH A 13 540 13 HOH WAT . 
F 5 HOH A 14 541 14 HOH WAT . 
F 5 HOH A 15 542 15 HOH WAT . 
F 5 HOH A 16 543 16 HOH WAT . 
F 5 HOH A 17 544 17 HOH WAT . 
F 5 HOH A 18 545 18 HOH WAT . 
F 5 HOH A 19 546 19 HOH WAT . 
F 5 HOH A 20 547 20 HOH WAT . 
F 5 HOH A 21 548 21 HOH WAT . 
F 5 HOH A 22 549 22 HOH WAT . 
F 5 HOH A 23 550 23 HOH WAT . 
F 5 HOH A 24 551 24 HOH WAT . 
F 5 HOH A 25 552 25 HOH WAT . 
F 5 HOH A 26 553 26 HOH WAT . 
F 5 HOH A 27 554 27 HOH WAT . 
F 5 HOH A 28 555 28 HOH WAT . 
F 5 HOH A 29 556 29 HOH WAT . 
F 5 HOH A 30 557 30 HOH WAT . 
F 5 HOH A 31 558 31 HOH WAT . 
F 5 HOH A 32 559 32 HOH WAT . 
F 5 HOH A 33 560 33 HOH WAT . 
F 5 HOH A 34 561 34 HOH WAT . 
F 5 HOH A 35 562 35 HOH WAT . 
F 5 HOH A 36 563 36 HOH WAT . 
F 5 HOH A 37 564 37 HOH WAT . 
F 5 HOH A 38 565 39 HOH WAT . 
F 5 HOH A 39 566 40 HOH WAT . 
F 5 HOH A 40 567 41 HOH WAT . 
F 5 HOH A 41 568 42 HOH WAT . 
F 5 HOH A 42 569 43 HOH WAT . 
F 5 HOH A 43 570 44 HOH WAT . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MN 
_atom_site.label_atom_id         MN 
_atom_site.label_comp_id         MN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               15.302 
_atom_site.Cartn_y               -6.115 
_atom_site.Cartn_z               13.685 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        69.56 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MN 
_atom_site.auth_comp_id          MN 
_atom_site.auth_seq_id           526 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              54 
_model_server_stats.parse_time_ms           42 
_model_server_stats.create_model_time_ms    13 
_model_server_stats.query_time_ms           317 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           1 
#