data_1P0N # _model_server_result.job_id zSOK2uONVefPYDOmmFjWvg _model_server_result.datetime_utc '2024-11-24 16:35:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1p0n # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":669}' # _entry.id 1P0N # _exptl.entry_id 1P0N _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 456.344 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN MONONUCLEOTIDE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1P0N _cell.length_a 115.027 _cell.length_b 115.027 _cell.length_c 139.939 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1P0N _symmetry.cell_setting ? _symmetry.Int_Tables_number 79 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 4' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA octameric 8 author_and_software_defined_assembly 1 PQS tetrameric 4 software_defined_assembly 2 PQS tetrameric 4 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D 1 1,2,3,4 A,C 2 1,2,3,4 B,D 3 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -y,x,z 0 -1 0 1 0 0 0 0 1 0 0 0 4 'crystal symmetry operation' 4_555 y,-x,z 0 1 0 -1 0 0 0 0 1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C17 H21 N4 O9 P' _chem_comp.formula_weight 456.344 _chem_comp.id FMN _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN MONONUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'RIBOFLAVIN MONOPHOSPHATE' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 FMN sing 83 n n N1 C10 FMN doub 84 n n C2 O2 FMN doub 85 n n C2 N3 FMN sing 86 n n N3 C4 FMN sing 87 n n N3 HN3 FMN sing 88 n n C4 O4 FMN doub 89 n n C4 C4A FMN sing 90 n n C4A N5 FMN doub 91 n n C4A C10 FMN sing 92 n n N5 C5A FMN sing 93 n n C5A C6 FMN doub 94 n y C5A C9A FMN sing 95 n y C6 C7 FMN sing 96 n y C6 H6 FMN sing 97 n n C7 C7M FMN sing 98 n n C7 C8 FMN doub 99 n y C7M HM71 FMN sing 100 n n C7M HM72 FMN sing 101 n n C7M HM73 FMN sing 102 n n C8 C8M FMN sing 103 n n C8 C9 FMN sing 104 n y C8M HM81 FMN sing 105 n n C8M HM82 FMN sing 106 n n C8M HM83 FMN sing 107 n n C9 C9A FMN doub 108 n y C9 H9 FMN sing 109 n n C9A N10 FMN sing 110 n n N10 C10 FMN sing 111 n n N10 C1' FMN sing 112 n n C1' C2' FMN sing 113 n n C1' "H1'1" FMN sing 114 n n C1' "H1'2" FMN sing 115 n n C2' O2' FMN sing 116 n n C2' C3' FMN sing 117 n n C2' H2' FMN sing 118 n n O2' HO2' FMN sing 119 n n C3' O3' FMN sing 120 n n C3' C4' FMN sing 121 n n C3' H3' FMN sing 122 n n O3' HO3' FMN sing 123 n n C4' O4' FMN sing 124 n n C4' C5' FMN sing 125 n n C4' H4' FMN sing 126 n n O4' HO4' FMN sing 127 n n C5' O5' FMN sing 128 n n C5' "H5'1" FMN sing 129 n n C5' "H5'2" FMN sing 130 n n O5' P FMN sing 131 n n P O1P FMN doub 132 n n P O2P FMN sing 133 n n P O3P FMN sing 134 n n O2P HOP2 FMN sing 135 n n O3P HOP3 FMN sing 136 n n # _atom_sites.entry_id 1P0N _atom_sites.fract_transf_matrix[1][1] 0.008694 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008694 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007146 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FMN A 1 669 669 FMN FMN . D 2 FMN B 1 1669 669 FMN FMN . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 FMN . . . C 2 34.141 -9.418 15.076 1 62.94 ? N1 FMN 669 A 1 HETATM 2 C C2 FMN . . . C 2 34.997 -10.064 15.959 1 60.68 ? C2 FMN 669 A 1 HETATM 3 O O2 FMN . . . C 2 34.839 -10.07 17.186 1 57.6 ? O2 FMN 669 A 1 HETATM 4 N N3 FMN . . . C 2 36.147 -10.761 15.392 1 59.56 ? N3 FMN 669 A 1 HETATM 5 C C4 FMN . . . C 2 36.457 -10.848 14.056 1 60.18 ? C4 FMN 669 A 1 HETATM 6 O O4 FMN . . . C 2 37.471 -11.48 13.708 1 55.11 ? O4 FMN 669 A 1 HETATM 7 C C4A FMN . . . C 2 35.531 -10.142 13.108 1 63.08 ? C4A FMN 669 A 1 HETATM 8 N N5 FMN . . . C 2 35.731 -10.162 11.759 1 65.35 ? N5 FMN 669 A 1 HETATM 9 C C5A FMN . . . C 2 34.847 -9.509 10.9 1 69.16 ? C5A FMN 669 A 1 HETATM 10 C C6 FMN . . . C 2 35.084 -9.531 9.43 1 72.57 ? C6 FMN 669 A 1 HETATM 11 C C7 FMN . . . C 2 34.249 -8.905 8.492 1 75.86 ? C7 FMN 669 A 1 HETATM 12 C C7M FMN . . . C 2 34.581 -8.984 6.979 1 77.66 ? C7M FMN 669 A 1 HETATM 13 C C8 FMN . . . C 2 33.018 -8.149 8.966 1 74.99 ? C8 FMN 669 A 1 HETATM 14 C C8M FMN . . . C 2 32.073 -7.453 8.013 1 73.02 ? C8M FMN 669 A 1 HETATM 15 C C9 FMN . . . C 2 32.767 -8.115 10.369 1 73.84 ? C9 FMN 669 A 1 HETATM 16 C C9A FMN . . . C 2 33.63 -8.762 11.377 1 70.49 ? C9A FMN 669 A 1 HETATM 17 N N10 FMN . . . C 2 33.435 -8.766 12.858 1 65.8 ? N10 FMN 669 A 1 HETATM 18 C C10 FMN . . . C 2 34.337 -9.438 13.738 1 63.9 ? C10 FMN 669 A 1 HETATM 19 C C1' FMN . . . C 2 32.254 -8.07 13.496 1 63.78 ? C1' FMN 669 A 1 HETATM 20 C C2' FMN . . . C 2 32.412 -6.555 13.551 1 61.61 ? C2' FMN 669 A 1 HETATM 21 O O2' FMN . . . C 2 33.595 -6.174 14.243 1 61.02 ? O2' FMN 669 A 1 HETATM 22 C C3' FMN . . . C 2 31.155 -5.807 14.229 1 59.93 ? C3' FMN 669 A 1 HETATM 23 O O3' FMN . . . C 2 30.811 -6.355 15.575 1 57.07 ? O3' FMN 669 A 1 HETATM 24 C C4' FMN . . . C 2 29.849 -5.811 13.36 1 57.21 ? C4' FMN 669 A 1 HETATM 25 O O4' FMN . . . C 2 29.29 -7.143 13.185 1 61.89 ? O4' FMN 669 A 1 HETATM 26 C C5' FMN . . . C 2 29.994 -5.29 11.939 1 55.34 ? C5' FMN 669 A 1 HETATM 27 O O5' FMN . . . C 2 30.352 -3.897 11.908 1 51.96 ? O5' FMN 669 A 1 HETATM 28 P P FMN . . . C 2 29.447 -2.709 12.435 1 50.38 ? P FMN 669 A 1 HETATM 29 O O1P FMN . . . C 2 29.793 -2.53 13.893 1 55.19 ? O1P FMN 669 A 1 HETATM 30 O O2P FMN . . . C 2 27.987 -3.043 12.207 1 45.42 ? O2P FMN 669 A 1 HETATM 31 O O3P FMN . . . C 2 29.98 -1.489 11.593 1 50.88 ? O3P FMN 669 A 1 # _model_server_stats.io_time_ms 5 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 210 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 31 #