data_1P1U # _model_server_result.job_id NHCWlY0NSQFVSSkgrRo91A _model_server_result.datetime_utc '2024-11-28 07:30:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1p1u # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":302}' # _entry.id 1P1U # _exptl.entry_id 1P1U _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 186.165 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(S)-ALPHA-AMINO-3-HYDROXY-5-METHYL-4-ISOXAZOLEPROPIONIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1P1U _cell.length_a 61.434 _cell.length_b 96.379 _cell.length_c 95.965 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1P1U _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 206 A CYS 206 1_555 A SG CYS 261 A CYS 261 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf2 B SG CYS 206 B CYS 206 1_555 B SG CYS 261 B CYS 261 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? # _chem_comp.formula 'C7 H10 N2 O4' _chem_comp.formula_weight 186.165 _chem_comp.id AMQ _chem_comp.mon_nstd_flag . _chem_comp.name '(S)-ALPHA-AMINO-3-HYDROXY-5-METHYL-4-ISOXAZOLEPROPIONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms AMPA # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA AMQ sing 13 n n N H AMQ sing 14 n n N HN2 AMQ sing 15 n n CA C AMQ sing 16 n n CA CB AMQ sing 17 n n CA HA AMQ sing 18 n n C OT1 AMQ doub 19 n n C OT2 AMQ sing 20 n n OT2 HXT AMQ sing 21 n n CB CG AMQ sing 22 n n CB HB1 AMQ sing 23 n n CB HB2 AMQ sing 24 n n CG CD1 AMQ sing 25 n y CG CD2 AMQ doub 26 n y CD1 OE1 AMQ sing 27 n n CD1 NE1 AMQ doub 28 n y CD2 CE2 AMQ sing 29 n n CD2 OE2 AMQ sing 30 n y CE2 HE21 AMQ sing 31 n n CE2 HE22 AMQ sing 32 n n CE2 HE23 AMQ sing 33 n n OE1 HE1 AMQ sing 34 n n NE1 OE2 AMQ sing 35 n y # _atom_sites.entry_id 1P1U _atom_sites.fract_transf_matrix[1][1] 0.016278 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010376 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01042 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 301 1 SO4 SO4 . D 3 AMQ A 1 302 2 AMQ AMP . E 3 AMQ B 1 264 1 AMQ AMP . F 4 HOH A 1 303 1 HOH TIP . F 4 HOH A 2 304 4 HOH TIP . F 4 HOH A 3 305 5 HOH TIP . F 4 HOH A 4 306 6 HOH TIP . F 4 HOH A 5 307 9 HOH TIP . F 4 HOH A 6 308 10 HOH TIP . F 4 HOH A 7 309 13 HOH TIP . F 4 HOH A 8 310 14 HOH TIP . F 4 HOH A 9 311 18 HOH TIP . F 4 HOH A 10 312 20 HOH TIP . F 4 HOH A 11 313 21 HOH TIP . F 4 HOH A 12 314 22 HOH TIP . F 4 HOH A 13 315 23 HOH TIP . F 4 HOH A 14 316 24 HOH TIP . F 4 HOH A 15 317 26 HOH TIP . F 4 HOH A 16 318 27 HOH TIP . F 4 HOH A 17 319 28 HOH TIP . F 4 HOH A 18 320 29 HOH TIP . F 4 HOH A 19 321 30 HOH TIP . F 4 HOH A 20 322 34 HOH TIP . F 4 HOH A 21 323 36 HOH TIP . F 4 HOH A 22 324 37 HOH TIP . F 4 HOH A 23 325 38 HOH TIP . F 4 HOH A 24 326 42 HOH TIP . F 4 HOH A 25 327 46 HOH TIP . F 4 HOH A 26 328 50 HOH TIP . F 4 HOH A 27 329 51 HOH TIP . F 4 HOH A 28 330 53 HOH TIP . F 4 HOH A 29 331 54 HOH TIP . F 4 HOH A 30 332 56 HOH TIP . F 4 HOH A 31 333 57 HOH TIP . F 4 HOH A 32 334 58 HOH TIP . F 4 HOH A 33 335 60 HOH TIP . F 4 HOH A 34 336 64 HOH TIP . F 4 HOH A 35 337 65 HOH TIP . F 4 HOH A 36 338 66 HOH TIP . F 4 HOH A 37 339 68 HOH TIP . F 4 HOH A 38 340 70 HOH TIP . F 4 HOH A 39 341 71 HOH TIP . F 4 HOH A 40 342 72 HOH TIP . F 4 HOH A 41 343 75 HOH TIP . F 4 HOH A 42 344 76 HOH TIP . F 4 HOH A 43 345 80 HOH TIP . F 4 HOH A 44 346 86 HOH TIP . F 4 HOH A 45 347 87 HOH TIP . F 4 HOH A 46 348 93 HOH TIP . F 4 HOH A 47 349 94 HOH TIP . F 4 HOH A 48 350 97 HOH TIP . F 4 HOH A 49 351 99 HOH TIP . F 4 HOH A 50 352 105 HOH TIP . F 4 HOH A 51 353 106 HOH TIP . F 4 HOH A 52 354 107 HOH TIP . F 4 HOH A 53 355 108 HOH TIP . F 4 HOH A 54 356 109 HOH TIP . F 4 HOH A 55 357 112 HOH TIP . F 4 HOH A 56 358 115 HOH TIP . F 4 HOH A 57 359 117 HOH TIP . F 4 HOH A 58 360 119 HOH TIP . F 4 HOH A 59 361 121 HOH TIP . F 4 HOH A 60 362 124 HOH TIP . F 4 HOH A 61 363 127 HOH TIP . F 4 HOH A 62 364 130 HOH TIP . F 4 HOH A 63 365 131 HOH TIP . F 4 HOH A 64 366 132 HOH TIP . F 4 HOH A 65 367 133 HOH TIP . F 4 HOH A 66 368 135 HOH TIP . F 4 HOH A 67 369 137 HOH TIP . F 4 HOH A 68 370 138 HOH TIP . F 4 HOH A 69 371 139 HOH TIP . F 4 HOH A 70 372 141 HOH TIP . F 4 HOH A 71 373 142 HOH TIP . F 4 HOH A 72 374 143 HOH TIP . F 4 HOH A 73 375 145 HOH TIP . F 4 HOH A 74 376 146 HOH TIP . F 4 HOH A 75 377 147 HOH TIP . F 4 HOH A 76 378 148 HOH TIP . F 4 HOH A 77 379 151 HOH TIP . F 4 HOH A 78 380 154 HOH TIP . F 4 HOH A 79 381 155 HOH TIP . F 4 HOH A 80 382 156 HOH TIP . F 4 HOH A 81 383 157 HOH TIP . F 4 HOH A 82 384 158 HOH TIP . F 4 HOH A 83 385 160 HOH TIP . F 4 HOH A 84 386 161 HOH TIP . F 4 HOH A 85 387 162 HOH TIP . F 4 HOH A 86 388 163 HOH TIP . F 4 HOH A 87 389 164 HOH TIP . F 4 HOH A 88 390 165 HOH TIP . F 4 HOH A 89 391 166 HOH TIP . F 4 HOH A 90 392 168 HOH TIP . F 4 HOH A 91 393 169 HOH TIP . F 4 HOH A 92 394 170 HOH TIP . F 4 HOH A 93 395 172 HOH TIP . F 4 HOH A 94 396 174 HOH TIP . F 4 HOH A 95 397 175 HOH TIP . F 4 HOH A 96 398 177 HOH TIP . G 4 HOH B 1 265 61 HOH TIP . G 4 HOH B 2 266 2 HOH TIP . G 4 HOH B 3 267 3 HOH TIP . G 4 HOH B 4 268 7 HOH TIP . G 4 HOH B 5 269 8 HOH TIP . G 4 HOH B 6 270 11 HOH TIP . G 4 HOH B 7 271 12 HOH TIP . G 4 HOH B 8 272 15 HOH TIP . G 4 HOH B 9 273 16 HOH TIP . G 4 HOH B 10 274 17 HOH TIP . G 4 HOH B 11 275 19 HOH TIP . G 4 HOH B 12 276 25 HOH TIP . G 4 HOH B 13 277 31 HOH TIP . G 4 HOH B 14 278 32 HOH TIP . G 4 HOH B 15 279 33 HOH TIP . G 4 HOH B 16 280 35 HOH TIP . G 4 HOH B 17 281 39 HOH TIP . G 4 HOH B 18 282 40 HOH TIP . G 4 HOH B 19 283 41 HOH TIP . G 4 HOH B 20 284 43 HOH TIP . G 4 HOH B 21 285 44 HOH TIP . G 4 HOH B 22 286 45 HOH TIP . G 4 HOH B 23 287 47 HOH TIP . G 4 HOH B 24 288 48 HOH TIP . G 4 HOH B 25 289 49 HOH TIP . G 4 HOH B 26 290 52 HOH TIP . G 4 HOH B 27 291 55 HOH TIP . G 4 HOH B 28 292 59 HOH TIP . G 4 HOH B 29 293 62 HOH TIP . G 4 HOH B 30 294 63 HOH TIP . G 4 HOH B 31 295 67 HOH TIP . G 4 HOH B 32 296 69 HOH TIP . G 4 HOH B 33 297 73 HOH TIP . G 4 HOH B 34 298 74 HOH TIP . G 4 HOH B 35 299 77 HOH TIP . G 4 HOH B 36 300 78 HOH TIP . G 4 HOH B 37 301 79 HOH TIP . G 4 HOH B 38 302 81 HOH TIP . G 4 HOH B 39 303 82 HOH TIP . G 4 HOH B 40 304 83 HOH TIP . G 4 HOH B 41 305 84 HOH TIP . G 4 HOH B 42 306 85 HOH TIP . G 4 HOH B 43 307 88 HOH TIP . G 4 HOH B 44 308 89 HOH TIP . G 4 HOH B 45 309 90 HOH TIP . G 4 HOH B 46 310 91 HOH TIP . G 4 HOH B 47 311 92 HOH TIP . G 4 HOH B 48 312 95 HOH TIP . G 4 HOH B 49 313 96 HOH TIP . G 4 HOH B 50 314 98 HOH TIP . G 4 HOH B 51 315 100 HOH TIP . G 4 HOH B 52 316 101 HOH TIP . G 4 HOH B 53 317 102 HOH TIP . G 4 HOH B 54 318 103 HOH TIP . G 4 HOH B 55 319 104 HOH TIP . G 4 HOH B 56 320 110 HOH TIP . G 4 HOH B 57 321 111 HOH TIP . G 4 HOH B 58 322 113 HOH TIP . G 4 HOH B 59 323 114 HOH TIP . G 4 HOH B 60 324 116 HOH TIP . G 4 HOH B 61 325 118 HOH TIP . G 4 HOH B 62 326 120 HOH TIP . G 4 HOH B 63 327 122 HOH TIP . G 4 HOH B 64 328 123 HOH TIP . G 4 HOH B 65 329 125 HOH TIP . G 4 HOH B 66 330 126 HOH TIP . G 4 HOH B 67 331 128 HOH TIP . G 4 HOH B 68 332 129 HOH TIP . G 4 HOH B 69 333 134 HOH TIP . G 4 HOH B 70 334 136 HOH TIP . G 4 HOH B 71 335 140 HOH TIP . G 4 HOH B 72 336 144 HOH TIP . G 4 HOH B 73 337 149 HOH TIP . G 4 HOH B 74 338 150 HOH TIP . G 4 HOH B 75 339 152 HOH TIP . G 4 HOH B 76 340 153 HOH TIP . G 4 HOH B 77 341 159 HOH TIP . G 4 HOH B 78 342 167 HOH TIP . G 4 HOH B 79 343 171 HOH TIP . G 4 HOH B 80 344 173 HOH TIP . G 4 HOH B 81 345 176 HOH TIP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N AMQ . . . D 3 8.525 -10.186 23.582 1 16.1 ? N AMQ 302 A 1 HETATM 2 C CA AMQ . . . D 3 8.972 -11.622 23.546 1 18.7 ? CA AMQ 302 A 1 HETATM 3 C C AMQ . . . D 3 9.263 -12.068 22.07 1 26.63 ? C AMQ 302 A 1 HETATM 4 O OT1 AMQ . . . D 3 9.559 -13.276 21.878 1 19.81 ? OT1 AMQ 302 A 1 HETATM 5 O OT2 AMQ . . . D 3 9.216 -11.177 21.179 1 18.45 ? OT2 AMQ 302 A 1 HETATM 6 C CB AMQ . . . D 3 7.893 -12.521 24.191 1 16.21 ? CB AMQ 302 A 1 HETATM 7 C CG AMQ . . . D 3 7.633 -12.238 25.652 1 14.01 ? CG AMQ 302 A 1 HETATM 8 C CD1 AMQ . . . D 3 8.263 -12.83 26.787 1 14 ? CD1 AMQ 302 A 1 HETATM 9 C CD2 AMQ . . . D 3 6.789 -11.361 26.255 1 13.66 ? CD2 AMQ 302 A 1 HETATM 10 C CE2 AMQ . . . D 3 5.762 -10.392 25.761 1 13.62 ? CE2 AMQ 302 A 1 HETATM 11 O OE1 AMQ . . . D 3 9.214 -13.735 26.545 1 12.65 ? OE1 AMQ 302 A 1 HETATM 12 N NE1 AMQ . . . D 3 7.909 -12.421 27.978 1 11.02 ? NE1 AMQ 302 A 1 HETATM 13 O OE2 AMQ . . . D 3 6.919 -11.427 27.631 1 15.49 ? OE2 AMQ 302 A 1 # _model_server_stats.io_time_ms 59 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 13 #