data_1P2V # _model_server_result.job_id 35RenIL0EslWkzWqrKcvRg _model_server_result.datetime_utc '2024-11-02 10:31:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1p2v # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1870}' # _entry.id 1P2V # _exptl.entry_id 1P2V _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 118.174 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description HEXANE-1,6-DIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1P2V _cell.length_a 40.36 _cell.length_b 40.36 _cell.length_c 161.64 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1P2V _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG SER 17 A SER 17 1_555 B MG MG . A MG 168 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.244 ? metalc ? metalc2 A OG1 THR 35 A THR 35 1_555 B MG MG . A MG 168 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.357 ? metalc ? metalc3 D O2G GNP . A GNP 167 1_555 B MG MG . A MG 168 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.382 ? metalc ? metalc4 D O2B GNP . A GNP 167 1_555 B MG MG . A MG 168 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.329 ? metalc ? metalc5 B MG MG . A MG 168 1_555 E O HOH . A HOH 1873 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.395 ? metalc ? metalc6 B MG MG . A MG 168 1_555 E O HOH . A HOH 1874 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.309 ? # _chem_comp.formula 'C6 H14 O2' _chem_comp.formula_weight 118.174 _chem_comp.id HEZ _chem_comp.mon_nstd_flag . _chem_comp.name HEXANE-1,6-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 HEZ sing 180 n n O1 HO1 HEZ sing 181 n n C1 C2 HEZ sing 182 n n C1 H11 HEZ sing 183 n n C1 H12 HEZ sing 184 n n C2 C3 HEZ sing 185 n n C2 H21 HEZ sing 186 n n C2 H22 HEZ sing 187 n n C3 C4 HEZ sing 188 n n C3 H31 HEZ sing 189 n n C3 H32 HEZ sing 190 n n C4 C5 HEZ sing 191 n n C4 H41 HEZ sing 192 n n C4 H42 HEZ sing 193 n n C5 C6 HEZ sing 194 n n C5 H51 HEZ sing 195 n n C5 H52 HEZ sing 196 n n C6 O6 HEZ sing 197 n n C6 H61 HEZ sing 198 n n C6 H62 HEZ sing 199 n n O6 HO6 HEZ sing 200 n n # _atom_sites.entry_id 1P2V _atom_sites.fract_transf_matrix[1][1] 0.024777 _atom_sites.fract_transf_matrix[1][2] 0.014305 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.02861 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006187 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 168 168 MG MG . C 3 HEZ A 1 1870 1870 HEZ HEZ . D 4 GNP A 1 167 167 GNP GNP . E 5 HOH A 1 1871 1 HOH HOH . E 5 HOH A 2 1872 2 HOH HOH . E 5 HOH A 3 1873 3 HOH HOH . E 5 HOH A 4 1874 4 HOH HOH . E 5 HOH A 5 1875 5 HOH HOH . E 5 HOH A 6 1876 6 HOH HOH . E 5 HOH A 7 1877 7 HOH HOH . E 5 HOH A 8 1878 8 HOH HOH . E 5 HOH A 9 1879 9 HOH HOH . E 5 HOH A 10 1880 10 HOH HOH . E 5 HOH A 11 1881 11 HOH HOH . E 5 HOH A 12 1882 12 HOH HOH . E 5 HOH A 13 1883 13 HOH HOH . E 5 HOH A 14 1884 14 HOH HOH . E 5 HOH A 15 1885 15 HOH HOH . E 5 HOH A 16 1886 16 HOH HOH . E 5 HOH A 17 1887 17 HOH HOH . E 5 HOH A 18 1888 18 HOH HOH . E 5 HOH A 19 1889 19 HOH HOH . E 5 HOH A 20 1890 20 HOH HOH . E 5 HOH A 21 1891 21 HOH HOH . E 5 HOH A 22 1892 22 HOH HOH . E 5 HOH A 23 1893 23 HOH HOH . E 5 HOH A 24 1894 24 HOH HOH . E 5 HOH A 25 1895 25 HOH HOH . E 5 HOH A 26 1896 26 HOH HOH . E 5 HOH A 27 1897 27 HOH HOH . E 5 HOH A 28 1898 28 HOH HOH . E 5 HOH A 29 1899 29 HOH HOH . E 5 HOH A 30 1900 30 HOH HOH . E 5 HOH A 31 1901 32 HOH HOH . E 5 HOH A 32 1902 33 HOH HOH . E 5 HOH A 33 1903 34 HOH HOH . E 5 HOH A 34 1904 35 HOH HOH . E 5 HOH A 35 1905 36 HOH HOH . E 5 HOH A 36 1906 37 HOH HOH . E 5 HOH A 37 1907 38 HOH HOH . E 5 HOH A 38 1908 39 HOH HOH . E 5 HOH A 39 1909 40 HOH HOH . E 5 HOH A 40 1910 41 HOH HOH . E 5 HOH A 41 1911 42 HOH HOH . E 5 HOH A 42 1912 43 HOH HOH . E 5 HOH A 43 1913 44 HOH HOH . E 5 HOH A 44 1914 45 HOH HOH . E 5 HOH A 45 1915 46 HOH HOH . E 5 HOH A 46 1916 47 HOH HOH . E 5 HOH A 47 1917 48 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 HEZ . . . C 3 -31.396 22.251 -113.806 1 47.01 ? O1 HEZ 1870 A 1 HETATM 2 C C1 HEZ . . . C 3 -30.902 23.441 -112.948 1 45.87 ? C1 HEZ 1870 A 1 HETATM 3 C C2 HEZ . . . C 3 -31.819 23.145 -111.696 1 47.45 ? C2 HEZ 1870 A 1 HETATM 4 C C3 HEZ . . . C 3 -31.613 24.024 -110.448 1 46.19 ? C3 HEZ 1870 A 1 HETATM 5 C C4 HEZ . . . C 3 -31.464 25.482 -109.866 1 48.09 ? C4 HEZ 1870 A 1 HETATM 6 C C5 HEZ . . . C 3 -30.945 25.121 -108.281 1 47.93 ? C5 HEZ 1870 A 1 HETATM 7 C C6 HEZ . . . C 3 -30.686 26.411 -107.444 1 45.82 ? C6 HEZ 1870 A 1 HETATM 8 O O6 HEZ . . . C 3 -31.154 27.602 -106.732 1 46.84 ? O6 HEZ 1870 A 1 # _model_server_stats.io_time_ms 57 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 339 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 8 #