data_1P2Y
#
_model_server_result.job_id            4tP25hknZWbPufEteVeJOw 
_model_server_result.datetime_utc      '2024-11-22 10:04:48' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1p2y 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":440}' 
#
_entry.id    1P2Y 
#
_exptl.entry_id    1P2Y 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              162.232 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (S)-3-(1-METHYLPYRROLIDIN-2-YL)PYRIDINE 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1P2Y 
_cell.length_a            64.05 
_cell.length_b            64.05 
_cell.length_c            251.06 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1P2Y 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 357 A CYS 357 1_555 B FE HEM . A HEM 430 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.297 ? 
metalc ? metalc2 B FE HEM . A HEM 430 1_555 C N1 NCT . A NCT 440 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.198 ? 
#
_chem_comp.formula           'C10 H14 N2' 
_chem_comp.formula_weight    162.232 
_chem_comp.id                NCT 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (S)-3-(1-METHYLPYRROLIDIN-2-YL)PYRIDINE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     '(S)-(-)-NICOTINE;3-[(2S)-1-METHYL-2-PYRROLIDINYL] PYRIDINE' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C1 NCT doub 319 n y 
N1 C5 NCT sing 320 n y 
C1 C2 NCT sing 321 n y 
C1 HC1 NCT sing 322 n n 
C2 C3 NCT doub 323 n y 
C2 C6 NCT sing 324 n n 
C3 C4 NCT sing 325 n y 
C3 HC3 NCT sing 326 n n 
C4 C5 NCT doub 327 n y 
C4 HC4 NCT sing 328 n n 
C5 HC5 NCT sing 329 n n 
N2 C6 NCT sing 330 n n 
N2 C9 NCT sing 331 n n 
N2 C10 NCT sing 332 n n 
C6 C7 NCT sing 333 n n 
C6 HC6 NCT sing 334 n n 
C7 C8 NCT sing 335 n n 
C7 HC71 NCT sing 336 n n 
C7 HC72 NCT sing 337 n n 
C8 C9 NCT sing 338 n n 
C8 HC81 NCT sing 339 n n 
C8 HC82 NCT sing 340 n n 
C9 HC91 NCT sing 341 n n 
C9 HC92 NCT sing 342 n n 
C10 H101 NCT sing 343 n n 
C10 H102 NCT sing 344 n n 
C10 H103 NCT sing 345 n n 
#
_atom_sites.entry_id                     1P2Y 
_atom_sites.fract_transf_matrix[1][1]    0.015613 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015613 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003983 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 HEM A 1 430 430 HEM HEM . 
C 3 NCT A 1 440 440 NCT NCT . 
D 4 HOH A 1 441 1 HOH WAT . 
D 4 HOH A 2 442 2 HOH WAT . 
D 4 HOH A 3 443 3 HOH WAT . 
D 4 HOH A 4 444 4 HOH WAT . 
D 4 HOH A 5 445 5 HOH WAT . 
D 4 HOH A 6 446 6 HOH WAT . 
D 4 HOH A 7 447 7 HOH WAT . 
D 4 HOH A 8 448 8 HOH WAT . 
D 4 HOH A 9 449 9 HOH WAT . 
D 4 HOH A 10 450 10 HOH WAT . 
D 4 HOH A 11 451 11 HOH WAT . 
D 4 HOH A 12 452 12 HOH WAT . 
D 4 HOH A 13 453 13 HOH WAT . 
D 4 HOH A 14 454 14 HOH WAT . 
D 4 HOH A 15 455 15 HOH WAT . 
D 4 HOH A 16 456 16 HOH WAT . 
D 4 HOH A 17 457 17 HOH WAT . 
D 4 HOH A 18 458 18 HOH WAT . 
D 4 HOH A 19 459 19 HOH WAT . 
D 4 HOH A 20 460 20 HOH WAT . 
D 4 HOH A 21 461 21 HOH WAT . 
D 4 HOH A 22 462 22 HOH WAT . 
D 4 HOH A 23 463 23 HOH WAT . 
D 4 HOH A 24 464 24 HOH WAT . 
D 4 HOH A 25 465 25 HOH WAT . 
D 4 HOH A 26 466 26 HOH WAT . 
D 4 HOH A 27 467 27 HOH WAT . 
D 4 HOH A 28 468 28 HOH WAT . 
D 4 HOH A 29 469 29 HOH WAT . 
D 4 HOH A 30 470 30 HOH WAT . 
D 4 HOH A 31 471 31 HOH WAT . 
D 4 HOH A 32 472 32 HOH WAT . 
D 4 HOH A 33 473 33 HOH WAT . 
D 4 HOH A 34 474 34 HOH WAT . 
D 4 HOH A 35 475 35 HOH WAT . 
D 4 HOH A 36 476 36 HOH WAT . 
D 4 HOH A 37 477 37 HOH WAT . 
D 4 HOH A 38 478 38 HOH WAT . 
D 4 HOH A 39 479 39 HOH WAT . 
D 4 HOH A 40 480 40 HOH WAT . 
D 4 HOH A 41 481 41 HOH WAT . 
D 4 HOH A 42 482 42 HOH WAT . 
D 4 HOH A 43 483 43 HOH WAT . 
D 4 HOH A 44 484 44 HOH WAT . 
D 4 HOH A 45 485 45 HOH WAT . 
D 4 HOH A 46 486 46 HOH WAT . 
D 4 HOH A 47 487 47 HOH WAT . 
D 4 HOH A 48 488 48 HOH WAT . 
D 4 HOH A 49 489 49 HOH WAT . 
D 4 HOH A 50 490 50 HOH WAT . 
D 4 HOH A 51 491 51 HOH WAT . 
D 4 HOH A 52 492 52 HOH WAT . 
D 4 HOH A 53 493 53 HOH WAT . 
D 4 HOH A 54 494 54 HOH WAT . 
D 4 HOH A 55 495 55 HOH WAT . 
D 4 HOH A 56 496 56 HOH WAT . 
D 4 HOH A 57 497 57 HOH WAT . 
D 4 HOH A 58 498 58 HOH WAT . 
D 4 HOH A 59 499 59 HOH WAT . 
D 4 HOH A 60 500 60 HOH WAT . 
D 4 HOH A 61 501 61 HOH WAT . 
D 4 HOH A 62 502 62 HOH WAT . 
D 4 HOH A 63 503 63 HOH WAT . 
D 4 HOH A 64 504 64 HOH WAT . 
D 4 HOH A 65 505 65 HOH WAT . 
D 4 HOH A 66 506 66 HOH WAT . 
D 4 HOH A 67 507 67 HOH WAT . 
D 4 HOH A 68 508 68 HOH WAT . 
D 4 HOH A 69 509 69 HOH WAT . 
D 4 HOH A 70 510 70 HOH WAT . 
D 4 HOH A 71 511 71 HOH WAT . 
D 4 HOH A 72 512 72 HOH WAT . 
D 4 HOH A 73 513 73 HOH WAT . 
D 4 HOH A 74 514 74 HOH WAT . 
D 4 HOH A 75 515 75 HOH WAT . 
D 4 HOH A 76 516 76 HOH WAT . 
D 4 HOH A 77 517 77 HOH WAT . 
D 4 HOH A 78 518 78 HOH WAT . 
D 4 HOH A 79 519 79 HOH WAT . 
D 4 HOH A 80 520 80 HOH WAT . 
D 4 HOH A 81 521 81 HOH WAT . 
D 4 HOH A 82 522 82 HOH WAT . 
D 4 HOH A 83 523 83 HOH WAT . 
D 4 HOH A 84 524 84 HOH WAT . 
D 4 HOH A 85 525 85 HOH WAT . 
D 4 HOH A 86 526 86 HOH WAT . 
D 4 HOH A 87 527 87 HOH WAT . 
D 4 HOH A 88 528 88 HOH WAT . 
D 4 HOH A 89 529 89 HOH WAT . 
D 4 HOH A 90 530 90 HOH WAT . 
D 4 HOH A 91 531 91 HOH WAT . 
D 4 HOH A 92 532 92 HOH WAT . 
D 4 HOH A 93 533 93 HOH WAT . 
D 4 HOH A 94 534 94 HOH WAT . 
D 4 HOH A 95 535 95 HOH WAT . 
D 4 HOH A 96 536 96 HOH WAT . 
D 4 HOH A 97 537 97 HOH WAT . 
D 4 HOH A 98 538 98 HOH WAT . 
D 4 HOH A 99 539 99 HOH WAT . 
D 4 HOH A 100 540 100 HOH WAT . 
D 4 HOH A 101 541 101 HOH WAT . 
D 4 HOH A 102 542 102 HOH WAT . 
D 4 HOH A 103 543 103 HOH WAT . 
D 4 HOH A 104 544 104 HOH WAT . 
D 4 HOH A 105 545 105 HOH WAT . 
D 4 HOH A 106 546 106 HOH WAT . 
D 4 HOH A 107 547 107 HOH WAT . 
D 4 HOH A 108 548 108 HOH WAT . 
D 4 HOH A 109 549 109 HOH WAT . 
D 4 HOH A 110 550 110 HOH WAT . 
D 4 HOH A 111 551 111 HOH WAT . 
D 4 HOH A 112 552 112 HOH WAT . 
D 4 HOH A 113 553 113 HOH WAT . 
D 4 HOH A 114 554 114 HOH WAT . 
D 4 HOH A 115 555 115 HOH WAT . 
D 4 HOH A 116 556 116 HOH WAT . 
D 4 HOH A 117 557 117 HOH WAT . 
D 4 HOH A 118 558 118 HOH WAT . 
D 4 HOH A 119 559 119 HOH WAT . 
D 4 HOH A 120 560 120 HOH WAT . 
D 4 HOH A 121 561 121 HOH WAT . 
D 4 HOH A 122 562 122 HOH WAT . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 NCT . . . C 3 14.53 10.959 39.396 1 18.02 ? N1 NCT 440 A 1 
HETATM 2 C C1 NCT . . . C 3 14.848 11.534 40.556 1 18.02 ? C1 NCT 440 A 1 
HETATM 3 C C2 NCT . . . C 3 15.983 12.295 40.734 1 18.02 ? C2 NCT 440 A 1 
HETATM 4 C C3 NCT . . . C 3 16.825 12.449 39.638 1 18.02 ? C3 NCT 440 A 1 
HETATM 5 C C4 NCT . . . C 3 16.523 11.839 38.434 1 18.02 ? C4 NCT 440 A 1 
HETATM 6 C C5 NCT . . . C 3 15.352 11.105 38.352 1 18.02 ? C5 NCT 440 A 1 
HETATM 7 N N2 NCT . . . C 3 17.641 13.401 42.234 1 18.02 ? N2 NCT 440 A 1 
HETATM 8 C C6 NCT . . . C 3 16.27 12.952 42.061 1 18.02 ? C6 NCT 440 A 1 
HETATM 9 C C7 NCT . . . C 3 15.467 14.258 42.221 1 18.02 ? C7 NCT 440 A 1 
HETATM 10 C C8 NCT . . . C 3 16.281 15.092 43.22 1 18.02 ? C8 NCT 440 A 1 
HETATM 11 C C9 NCT . . . C 3 17.637 14.351 43.335 1 18.02 ? C9 NCT 440 A 1 
HETATM 12 C C10 NCT . . . C 3 18.632 12.352 42.357 1 18.02 ? C10 NCT 440 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           274 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           12 
#