data_1P3J # _model_server_result.job_id YsNwAX2_UHW-15lKpk4YAQ _model_server_result.datetime_utc '2024-11-26 21:13:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1p3j # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":219}' # _entry.id 1P3J # _exptl.entry_id 1P3J _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 101.6 _cell.angle_gamma 90 _cell.entry_id 1P3J _cell.length_a 32.8 _cell.length_b 73.2 _cell.length_c 38.1 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1P3J _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 130 A CYS 130 1_555 B ZN ZN . A ZN 218 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.074 ? metalc ? metalc2 A SG CYS 133 A CYS 133 1_555 B ZN ZN . A ZN 218 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.399 ? metalc ? metalc3 A SG CYS 150 A CYS 150 1_555 B ZN ZN . A ZN 218 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.194 ? metalc ? metalc4 A OD2 ASP 153 A ASP 153 1_555 B ZN ZN . A ZN 218 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.43 ? metalc ? metalc5 C MG MG . A MG 219 1_555 D O2B AP5 . A AP5 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.337 ? metalc ? metalc6 C MG MG . A MG 219 1_555 D O2G AP5 . A AP5 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.327 ? metalc ? metalc7 C MG MG . A MG 219 1_555 E O HOH . A HOH 221 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.264 ? metalc ? metalc8 C MG MG . A MG 219 1_555 E O HOH . A HOH 222 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.114 ? metalc ? metalc9 C MG MG . A MG 219 1_555 E O HOH . A HOH 223 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? metalc ? metalc10 C MG MG . A MG 219 1_555 E O HOH . A HOH 224 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.292 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1P3J _atom_sites.fract_transf_matrix[1][1] 0.030488 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006258 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013661 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.026794 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 218 214 ZN ZN . C 3 MG A 1 219 215 MG MG . D 4 AP5 A 1 220 213 AP5 AP5 . E 5 HOH A 1 221 216 HOH HOH . E 5 HOH A 2 222 217 HOH HOH . E 5 HOH A 3 223 218 HOH HOH . E 5 HOH A 4 224 219 HOH HOH . E 5 HOH A 5 225 220 HOH HOH . E 5 HOH A 6 226 221 HOH HOH . E 5 HOH A 7 227 222 HOH HOH . E 5 HOH A 8 228 223 HOH HOH . E 5 HOH A 9 229 224 HOH HOH . E 5 HOH A 10 230 225 HOH HOH . E 5 HOH A 11 231 226 HOH HOH . E 5 HOH A 12 232 227 HOH HOH . E 5 HOH A 13 233 228 HOH HOH . E 5 HOH A 14 234 229 HOH HOH . E 5 HOH A 15 235 230 HOH HOH . E 5 HOH A 16 236 231 HOH HOH . E 5 HOH A 17 237 232 HOH HOH . E 5 HOH A 18 238 233 HOH HOH . E 5 HOH A 19 239 234 HOH HOH . E 5 HOH A 20 240 235 HOH HOH . E 5 HOH A 21 241 236 HOH HOH . E 5 HOH A 22 242 237 HOH HOH . E 5 HOH A 23 243 238 HOH HOH . E 5 HOH A 24 244 239 HOH HOH . E 5 HOH A 25 245 240 HOH HOH . E 5 HOH A 26 246 241 HOH HOH . E 5 HOH A 27 247 242 HOH HOH . E 5 HOH A 28 248 243 HOH HOH . E 5 HOH A 29 249 244 HOH HOH . E 5 HOH A 30 250 245 HOH HOH . E 5 HOH A 31 251 246 HOH HOH . E 5 HOH A 32 252 247 HOH HOH . E 5 HOH A 33 253 248 HOH HOH . E 5 HOH A 34 254 249 HOH HOH . E 5 HOH A 35 255 250 HOH HOH . E 5 HOH A 36 256 251 HOH HOH . E 5 HOH A 37 257 252 HOH HOH . E 5 HOH A 38 258 253 HOH HOH . E 5 HOH A 39 259 254 HOH HOH . E 5 HOH A 40 260 255 HOH HOH . E 5 HOH A 41 261 256 HOH HOH . E 5 HOH A 42 262 257 HOH HOH . E 5 HOH A 43 263 258 HOH HOH . E 5 HOH A 44 264 259 HOH HOH . E 5 HOH A 45 265 260 HOH HOH . E 5 HOH A 46 266 261 HOH HOH . E 5 HOH A 47 267 262 HOH HOH . E 5 HOH A 48 268 263 HOH HOH . E 5 HOH A 49 269 264 HOH HOH . E 5 HOH A 50 270 265 HOH HOH . E 5 HOH A 51 271 266 HOH HOH . E 5 HOH A 52 272 267 HOH HOH . E 5 HOH A 53 273 268 HOH HOH . E 5 HOH A 54 274 269 HOH HOH . E 5 HOH A 55 275 270 HOH HOH . E 5 HOH A 56 276 271 HOH HOH . E 5 HOH A 57 277 272 HOH HOH . E 5 HOH A 58 278 273 HOH HOH . E 5 HOH A 59 279 274 HOH HOH . E 5 HOH A 60 280 275 HOH HOH . E 5 HOH A 61 281 276 HOH HOH . E 5 HOH A 62 282 277 HOH HOH . E 5 HOH A 63 283 278 HOH HOH . E 5 HOH A 64 284 279 HOH HOH . E 5 HOH A 65 285 280 HOH HOH . E 5 HOH A 66 286 281 HOH HOH . E 5 HOH A 67 287 282 HOH HOH . E 5 HOH A 68 288 283 HOH HOH . E 5 HOH A 69 289 284 HOH HOH . E 5 HOH A 70 290 285 HOH HOH . E 5 HOH A 71 291 286 HOH HOH . E 5 HOH A 72 292 287 HOH HOH . E 5 HOH A 73 293 288 HOH HOH . E 5 HOH A 74 294 289 HOH HOH . E 5 HOH A 75 295 290 HOH HOH . E 5 HOH A 76 296 291 HOH HOH . E 5 HOH A 77 297 292 HOH HOH . E 5 HOH A 78 298 293 HOH HOH . E 5 HOH A 79 299 294 HOH HOH . E 5 HOH A 80 300 295 HOH HOH . E 5 HOH A 81 301 296 HOH HOH . E 5 HOH A 82 302 297 HOH HOH . E 5 HOH A 83 303 298 HOH HOH . E 5 HOH A 84 304 299 HOH HOH . E 5 HOH A 85 305 300 HOH HOH . E 5 HOH A 86 306 301 HOH HOH . E 5 HOH A 87 307 302 HOH HOH . E 5 HOH A 88 308 303 HOH HOH . E 5 HOH A 89 309 304 HOH HOH . E 5 HOH A 90 310 305 HOH HOH . E 5 HOH A 91 311 306 HOH HOH . E 5 HOH A 92 312 307 HOH HOH . E 5 HOH A 93 313 308 HOH HOH . E 5 HOH A 94 314 309 HOH HOH . E 5 HOH A 95 315 310 HOH HOH . E 5 HOH A 96 316 311 HOH HOH . E 5 HOH A 97 317 312 HOH HOH . E 5 HOH A 98 318 313 HOH HOH . E 5 HOH A 99 319 314 HOH HOH . E 5 HOH A 100 320 315 HOH HOH . E 5 HOH A 101 321 316 HOH HOH . E 5 HOH A 102 322 317 HOH HOH . E 5 HOH A 103 323 318 HOH HOH . E 5 HOH A 104 324 319 HOH HOH . E 5 HOH A 105 325 320 HOH HOH . E 5 HOH A 106 326 321 HOH HOH . E 5 HOH A 107 327 322 HOH HOH . E 5 HOH A 108 328 323 HOH HOH . E 5 HOH A 109 329 324 HOH HOH . E 5 HOH A 110 330 325 HOH HOH . E 5 HOH A 111 331 326 HOH HOH . E 5 HOH A 112 332 327 HOH HOH . E 5 HOH A 113 333 328 HOH HOH . E 5 HOH A 114 334 329 HOH HOH . E 5 HOH A 115 335 330 HOH HOH . E 5 HOH A 116 336 331 HOH HOH . E 5 HOH A 117 337 332 HOH HOH . E 5 HOH A 118 338 333 HOH HOH . E 5 HOH A 119 339 334 HOH HOH . E 5 HOH A 120 340 335 HOH HOH . E 5 HOH A 121 341 336 HOH HOH . E 5 HOH A 122 342 337 HOH HOH . E 5 HOH A 123 343 338 HOH HOH . E 5 HOH A 124 344 339 HOH HOH . E 5 HOH A 125 345 340 HOH HOH . E 5 HOH A 126 346 341 HOH HOH . E 5 HOH A 127 347 342 HOH HOH . E 5 HOH A 128 348 343 HOH HOH . E 5 HOH A 129 349 344 HOH HOH . E 5 HOH A 130 350 345 HOH HOH . E 5 HOH A 131 351 346 HOH HOH . E 5 HOH A 132 352 347 HOH HOH . E 5 HOH A 133 353 348 HOH HOH . E 5 HOH A 134 354 349 HOH HOH . E 5 HOH A 135 355 350 HOH HOH . E 5 HOH A 136 356 351 HOH HOH . E 5 HOH A 137 357 352 HOH HOH . E 5 HOH A 138 358 353 HOH HOH . E 5 HOH A 139 359 354 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 5.431 _atom_site.Cartn_y 70.677 _atom_site.Cartn_z 6.735 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 13.96 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 219 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 40 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 24 _model_server_stats.query_time_ms 320 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #