data_1P45 # _model_server_result.job_id cg7jPmxdALYWhZyLSCEbyg _model_server_result.datetime_utc '2025-08-05 09:07:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1p45 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":300}' # _entry.id 1P45 # _exptl.entry_id 1P45 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 663.425 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description NICOTINAMIDE-ADENINE-DINUCLEOTIDE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1P45 _cell.length_a 94.822 _cell.length_b 104.12 _cell.length_c 189.746 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1P45 _symmetry.cell_setting ? _symmetry.Int_Tables_number 24 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 21 21 21' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 6_555 -x,-y+1/2,z -1 0 0 0 -1 0 0 0 1 0 52.06 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 F N N # _chem_comp.formula 'C21 H27 N7 O14 P2' _chem_comp.formula_weight 663.425 _chem_comp.id NAD _chem_comp.mon_nstd_flag . _chem_comp.name NICOTINAMIDE-ADENINE-DINUCLEOTIDE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A NAD doub 237 n n PA O2A NAD sing 238 n n PA O5B NAD sing 239 n n PA O3 NAD sing 240 n n O2A HOA2 NAD sing 241 n n O5B C5B NAD sing 242 n n C5B C4B NAD sing 243 n n C5B H51A NAD sing 244 n n C5B H52A NAD sing 245 n n C4B O4B NAD sing 246 n n C4B C3B NAD sing 247 n n C4B H4B NAD sing 248 n n O4B C1B NAD sing 249 n n C3B O3B NAD sing 250 n n C3B C2B NAD sing 251 n n C3B H3B NAD sing 252 n n O3B HO3A NAD sing 253 n n C2B O2B NAD sing 254 n n C2B C1B NAD sing 255 n n C2B H2B NAD sing 256 n n O2B HO2A NAD sing 257 n n C1B N9A NAD sing 258 n n C1B H1B NAD sing 259 n n N9A C8A NAD sing 260 n y N9A C4A NAD sing 261 n y C8A N7A NAD doub 262 n y C8A H8A NAD sing 263 n n N7A C5A NAD sing 264 n y C5A C6A NAD sing 265 n y C5A C4A NAD doub 266 n y C6A N6A NAD sing 267 n n C6A N1A NAD doub 268 n y N6A H61A NAD sing 269 n n N6A H62A NAD sing 270 n n N1A C2A NAD sing 271 n y C2A N3A NAD doub 272 n y C2A H2A NAD sing 273 n n N3A C4A NAD sing 274 n y O3 PN NAD sing 275 n n PN O1N NAD doub 276 n n PN O2N NAD sing 277 n n PN O5D NAD sing 278 n n O5D C5D NAD sing 279 n n C5D C4D NAD sing 280 n n C5D H51N NAD sing 281 n n C5D H52N NAD sing 282 n n C4D O4D NAD sing 283 n n C4D C3D NAD sing 284 n n C4D H4D NAD sing 285 n n O4D C1D NAD sing 286 n n C3D O3D NAD sing 287 n n C3D C2D NAD sing 288 n n C3D H3D NAD sing 289 n n O3D HO3N NAD sing 290 n n C2D O2D NAD sing 291 n n C2D C1D NAD sing 292 n n C2D H2D NAD sing 293 n n O2D HO2N NAD sing 294 n n C1D N1N NAD sing 295 n n C1D H1D NAD sing 296 n n N1N C2N NAD sing 297 n y N1N C6N NAD doub 298 n y C2N C3N NAD doub 299 n y C2N H2N NAD sing 300 n n C3N C7N NAD sing 301 n n C3N C4N NAD sing 302 n y C7N O7N NAD doub 303 n n C7N N7N NAD sing 304 n n N7N H71N NAD sing 305 n n N7N H72N NAD sing 306 n n C4N C5N NAD doub 307 n y C4N H4N NAD sing 308 n n C5N C6N NAD sing 309 n y C5N H5N NAD sing 310 n n C6N H6N NAD sing 311 n n # _atom_sites.entry_id 1P45 _atom_sites.fract_transf_matrix[1][1] 0.010546 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009604 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00527 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NAD A 1 300 300 NAD NAD . D 3 TCL A 1 400 400 TCL TCL . E 3 TCL A 1 450 450 TCL TCL . F 2 NAD B 1 350 350 NAD NAD . G 3 TCL B 1 500 500 TCL TCL . H 4 HOH A 1 451 2 HOH HOH . H 4 HOH A 2 452 4 HOH HOH . H 4 HOH A 3 453 5 HOH HOH . H 4 HOH A 4 454 7 HOH HOH . H 4 HOH A 5 455 8 HOH HOH . H 4 HOH A 6 456 10 HOH HOH . H 4 HOH A 7 457 13 HOH HOH . H 4 HOH A 8 458 15 HOH HOH . H 4 HOH A 9 459 18 HOH HOH . H 4 HOH A 10 460 19 HOH HOH . H 4 HOH A 11 461 22 HOH HOH . H 4 HOH A 12 462 24 HOH HOH . H 4 HOH A 13 463 26 HOH HOH . H 4 HOH A 14 464 27 HOH HOH . H 4 HOH A 15 465 34 HOH HOH . H 4 HOH A 16 466 35 HOH HOH . H 4 HOH A 17 467 38 HOH HOH . H 4 HOH A 18 468 40 HOH HOH . H 4 HOH A 19 469 44 HOH HOH . H 4 HOH A 20 470 46 HOH HOH . I 4 HOH B 1 501 3 HOH HOH . I 4 HOH B 2 502 6 HOH HOH . I 4 HOH B 3 503 11 HOH HOH . I 4 HOH B 4 504 12 HOH HOH . I 4 HOH B 5 505 14 HOH HOH . I 4 HOH B 6 506 16 HOH HOH . I 4 HOH B 7 507 17 HOH HOH . I 4 HOH B 8 508 20 HOH HOH . I 4 HOH B 9 509 23 HOH HOH . I 4 HOH B 10 510 25 HOH HOH . I 4 HOH B 11 511 28 HOH HOH . I 4 HOH B 12 512 29 HOH HOH . I 4 HOH B 13 513 30 HOH HOH . I 4 HOH B 14 514 31 HOH HOH . I 4 HOH B 15 515 32 HOH HOH . I 4 HOH B 16 516 33 HOH HOH . I 4 HOH B 17 517 36 HOH HOH . I 4 HOH B 18 518 37 HOH HOH . I 4 HOH B 19 519 39 HOH HOH . I 4 HOH B 20 520 41 HOH HOH . I 4 HOH B 21 521 42 HOH HOH . I 4 HOH B 22 522 43 HOH HOH . I 4 HOH B 23 523 45 HOH HOH . I 4 HOH B 24 524 47 HOH HOH . I 4 HOH B 25 525 48 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA NAD . . . C 2 5.462 1.328 35.596 1 42.81 ? PA NAD 300 A 1 HETATM 2 O O1A NAD . . . C 2 6.678 1.198 36.382 1 41.81 ? O1A NAD 300 A 1 HETATM 3 O O2A NAD . . . C 2 4.322 0.37 36.042 1 39.53 ? O2A NAD 300 A 1 HETATM 4 O O5B NAD . . . C 2 5.675 1.101 34.022 1 44.34 ? O5B NAD 300 A 1 HETATM 5 C C5B NAD . . . C 2 6.914 1.183 33.387 1 48.75 ? C5B NAD 300 A 1 HETATM 6 C C4B NAD . . . C 2 7.036 0.077 32.349 1 52.46 ? C4B NAD 300 A 1 HETATM 7 O O4B NAD . . . C 2 8.219 0.434 31.606 1 53.07 ? O4B NAD 300 A 1 HETATM 8 C C3B NAD . . . C 2 7.244 -1.31 33.013 1 51.29 ? C3B NAD 300 A 1 HETATM 9 O O3B NAD . . . C 2 6.717 -2.432 32.326 1 53.36 ? O3B NAD 300 A 1 HETATM 10 C C2B NAD . . . C 2 8.748 -1.362 32.913 1 50.37 ? C2B NAD 300 A 1 HETATM 11 O O2B NAD . . . C 2 9.194 -2.639 32.942 1 46.49 ? O2B NAD 300 A 1 HETATM 12 C C1B NAD . . . C 2 8.92 -0.774 31.519 1 51.04 ? C1B NAD 300 A 1 HETATM 13 N N9A NAD . . . C 2 10.254 -0.683 30.952 1 50.34 ? N9A NAD 300 A 1 HETATM 14 C C8A NAD . . . C 2 11.381 0.02 31.31 1 53.24 ? C8A NAD 300 A 1 HETATM 15 N N7A NAD . . . C 2 12.352 -0.257 30.377 1 52.34 ? N7A NAD 300 A 1 HETATM 16 C C5A NAD . . . C 2 11.829 -1.108 29.433 1 45.52 ? C5A NAD 300 A 1 HETATM 17 C C6A NAD . . . C 2 12.35 -1.651 28.3 1 40.59 ? C6A NAD 300 A 1 HETATM 18 N N6A NAD . . . C 2 13.629 -1.395 27.926 1 35.34 ? N6A NAD 300 A 1 HETATM 19 N N1A NAD . . . C 2 11.517 -2.445 27.555 1 43.57 ? N1A NAD 300 A 1 HETATM 20 C C2A NAD . . . C 2 10.213 -2.665 27.903 1 46.71 ? C2A NAD 300 A 1 HETATM 21 N N3A NAD . . . C 2 9.699 -2.094 29.033 1 46.5 ? N3A NAD 300 A 1 HETATM 22 C C4A NAD . . . C 2 10.513 -1.343 29.78 1 48.1 ? C4A NAD 300 A 1 HETATM 23 O O3 NAD . . . C 2 4.797 2.785 35.836 1 45.11 ? O3 NAD 300 A 1 HETATM 24 P PN NAD . . . C 2 3.468 3.221 35.035 1 47.7 ? PN NAD 300 A 1 HETATM 25 O O1N NAD . . . C 2 2.605 2.114 34.437 1 45.85 ? O1N NAD 300 A 1 HETATM 26 O O2N NAD . . . C 2 2.878 4.312 35.795 1 46.65 ? O2N NAD 300 A 1 HETATM 27 O O5D NAD . . . C 2 4.33 3.927 33.872 1 42.44 ? O5D NAD 300 A 1 HETATM 28 C C5D NAD . . . C 2 3.795 3.63 32.61 1 43.32 ? C5D NAD 300 A 1 HETATM 29 C C4D NAD . . . C 2 3.739 4.774 31.607 1 42.66 ? C4D NAD 300 A 1 HETATM 30 O O4D NAD . . . C 2 2.799 5.746 31.961 1 39.27 ? O4D NAD 300 A 1 HETATM 31 C C3D NAD . . . C 2 5.041 5.502 31.415 1 41.83 ? C3D NAD 300 A 1 HETATM 32 O O3D NAD . . . C 2 4.991 6.179 30.176 1 42.39 ? O3D NAD 300 A 1 HETATM 33 C C2D NAD . . . C 2 4.954 6.59 32.421 1 40.36 ? C2D NAD 300 A 1 HETATM 34 O O2D NAD . . . C 2 5.964 7.494 32.106 1 38.45 ? O2D NAD 300 A 1 HETATM 35 C C1D NAD . . . C 2 3.525 6.966 32.106 1 41.9 ? C1D NAD 300 A 1 HETATM 36 N N1N NAD . . . C 2 2.891 7.806 33.115 1 45.5 ? N1N NAD 300 A 1 HETATM 37 C C2N NAD . . . C 2 2.775 7.384 34.38 1 47.93 ? C2N NAD 300 A 1 HETATM 38 C C3N NAD . . . C 2 2.153 8.215 35.303 1 53.25 ? C3N NAD 300 A 1 HETATM 39 C C7N NAD . . . C 2 2.032 7.774 36.727 1 49.6 ? C7N NAD 300 A 1 HETATM 40 O O7N NAD . . . C 2 1.44 8.534 37.722 1 57.59 ? O7N NAD 300 A 1 HETATM 41 N N7N NAD . . . C 2 2.451 6.634 37.086 1 45.6 ? N7N NAD 300 A 1 HETATM 42 C C4N NAD . . . C 2 1.63 9.47 34.908 1 54.68 ? C4N NAD 300 A 1 HETATM 43 C C5N NAD . . . C 2 1.746 9.873 33.591 1 52.81 ? C5N NAD 300 A 1 HETATM 44 C C6N NAD . . . C 2 2.384 9.012 32.712 1 50.13 ? C6N NAD 300 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 29 _model_server_stats.query_time_ms 328 _model_server_stats.encode_time_ms 16 _model_server_stats.element_count 44 #