data_1P7R
#
_model_server_result.job_id            v0tuPGt5tgW4i-wnIMuqtQ 
_model_server_result.datetime_utc      '2025-02-28 08:56:10' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1p7r 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":430}' 
#
_entry.id    1P7R 
#
_exptl.entry_id    1P7R 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              616.487 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PROTOPORPHYRIN IX CONTAINING FE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1P7R 
_cell.length_a            63.455 
_cell.length_b            63.455 
_cell.length_c            248.759 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1P7R 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_struct_conn.conn_type_id                   metalc 
_struct_conn.details                        ? 
_struct_conn.id                             metalc1 
_struct_conn.ptnr1_label_asym_id            A 
_struct_conn.ptnr1_label_atom_id            SG 
_struct_conn.ptnr1_label_comp_id            CYS 
_struct_conn.ptnr1_label_seq_id             357 
_struct_conn.ptnr1_auth_asym_id             A 
_struct_conn.ptnr1_auth_comp_id             CYS 
_struct_conn.ptnr1_auth_seq_id              357 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            B 
_struct_conn.ptnr2_label_atom_id            FE 
_struct_conn.ptnr2_label_comp_id            HEM 
_struct_conn.ptnr2_label_seq_id             . 
_struct_conn.ptnr2_auth_asym_id             A 
_struct_conn.ptnr2_auth_comp_id             HEM 
_struct_conn.ptnr2_auth_seq_id              430 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                2.357 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C34 H32 Fe N4 O4' 
_chem_comp.formula_weight    616.487 
_chem_comp.id                HEM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PROTOPORPHYRIN IX CONTAINING FE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     HEME 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CHA C1A HEM sing 129 n n 
CHA C4D HEM doub 130 n n 
CHA HHA HEM sing 131 n n 
CHB C4A HEM sing 132 n n 
CHB C1B HEM doub 133 n n 
CHB HHB HEM sing 134 n n 
CHC C4B HEM sing 135 n n 
CHC C1C HEM doub 136 n n 
CHC HHC HEM sing 137 n n 
CHD C4C HEM doub 138 n n 
CHD C1D HEM sing 139 n n 
CHD HHD HEM sing 140 n n 
C1A C2A HEM doub 141 n y 
C1A NA HEM sing 142 n y 
C2A C3A HEM sing 143 n y 
C2A CAA HEM sing 144 n n 
C3A C4A HEM doub 145 n y 
C3A CMA HEM sing 146 n n 
C4A NA HEM sing 147 n y 
CMA HMA HEM sing 148 n n 
CMA HMAA HEM sing 149 n n 
CMA HMAB HEM sing 150 n n 
CAA CBA HEM sing 151 n n 
CAA HAA HEM sing 152 n n 
CAA HAAA HEM sing 153 n n 
CBA CGA HEM sing 154 n n 
CBA HBA HEM sing 155 n n 
CBA HBAA HEM sing 156 n n 
CGA O1A HEM doub 157 n n 
CGA O2A HEM sing 158 n n 
C1B C2B HEM sing 159 n n 
C1B NB HEM sing 160 n n 
C2B C3B HEM doub 161 n n 
C2B CMB HEM sing 162 n n 
C3B C4B HEM sing 163 n n 
C3B CAB HEM sing 164 n n 
C4B NB HEM doub 165 n n 
CMB HMB HEM sing 166 n n 
CMB HMBA HEM sing 167 n n 
CMB HMBB HEM sing 168 n n 
CAB CBB HEM doub 169 n n 
CAB HAB HEM sing 170 n n 
CBB HBB HEM sing 171 n n 
CBB HBBA HEM sing 172 n n 
C1C C2C HEM sing 173 n y 
C1C NC HEM sing 174 n y 
C2C C3C HEM doub 175 n y 
C2C CMC HEM sing 176 n n 
C3C C4C HEM sing 177 n y 
C3C CAC HEM sing 178 n n 
C4C NC HEM sing 179 n y 
CMC HMC HEM sing 180 n n 
CMC HMCA HEM sing 181 n n 
CMC HMCB HEM sing 182 n n 
CAC CBC HEM doub 183 n n 
CAC HAC HEM sing 184 n n 
CBC HBC HEM sing 185 n n 
CBC HBCA HEM sing 186 n n 
C1D C2D HEM sing 187 n n 
C1D ND HEM doub 188 n n 
C2D C3D HEM doub 189 n n 
C2D CMD HEM sing 190 n n 
C3D C4D HEM sing 191 n n 
C3D CAD HEM sing 192 n n 
C4D ND HEM sing 193 n n 
CMD HMD HEM sing 194 n n 
CMD HMDA HEM sing 195 n n 
CMD HMDB HEM sing 196 n n 
CAD CBD HEM sing 197 n n 
CAD HAD HEM sing 198 n n 
CAD HADA HEM sing 199 n n 
CBD CGD HEM sing 200 n n 
CBD HBD HEM sing 201 n n 
CBD HBDA HEM sing 202 n n 
CGD O1D HEM doub 203 n n 
CGD O2D HEM sing 204 n n 
O2A H2A HEM sing 205 n n 
O2D H2D HEM sing 206 n n 
FE NA HEM sing 207 n n 
FE NB HEM sing 208 n n 
FE NC HEM sing 209 n n 
FE ND HEM sing 210 n n 
#
_atom_sites.entry_id                     1P7R 
_atom_sites.fract_transf_matrix[1][1]    0.015758 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015758 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00402 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 HEM A 1 430 430 HEM HEM . 
C 3 NCT A 1 440 440 NCT NCT . 
D 4 HOH A 1 441 1 HOH HOH . 
D 4 HOH A 2 442 2 HOH HOH . 
D 4 HOH A 3 443 3 HOH HOH . 
D 4 HOH A 4 444 4 HOH HOH . 
D 4 HOH A 5 445 5 HOH HOH . 
D 4 HOH A 6 446 6 HOH HOH . 
D 4 HOH A 7 447 7 HOH HOH . 
D 4 HOH A 8 448 8 HOH HOH . 
D 4 HOH A 9 449 9 HOH HOH . 
D 4 HOH A 10 450 10 HOH HOH . 
D 4 HOH A 11 451 11 HOH HOH . 
D 4 HOH A 12 452 12 HOH HOH . 
D 4 HOH A 13 453 13 HOH HOH . 
D 4 HOH A 14 454 14 HOH HOH . 
D 4 HOH A 15 455 15 HOH HOH . 
D 4 HOH A 16 456 16 HOH HOH . 
D 4 HOH A 17 457 17 HOH HOH . 
D 4 HOH A 18 458 18 HOH HOH . 
D 4 HOH A 19 459 19 HOH HOH . 
D 4 HOH A 20 460 20 HOH HOH . 
D 4 HOH A 21 461 21 HOH HOH . 
D 4 HOH A 22 462 22 HOH HOH . 
D 4 HOH A 23 463 23 HOH HOH . 
D 4 HOH A 24 464 24 HOH HOH . 
D 4 HOH A 25 465 25 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CHA HEM . . . B 2 11.959 13.237 39.039 1 24.05 ? CHA HEM 430 A 1 
HETATM 2 C CHB HEM . . . B 2 12.397 9.787 42.36 1 23.68 ? CHB HEM 430 A 1 
HETATM 3 C CHC HEM . . . B 2 13.618 6.67 38.966 1 27.09 ? CHC HEM 430 A 1 
HETATM 4 C CHD HEM . . . B 2 13.48 10.203 35.686 1 23.8 ? CHD HEM 430 A 1 
HETATM 5 C C1A HEM . . . B 2 11.879 12.538 40.231 1 23.83 ? C1A HEM 430 A 1 
HETATM 6 C C2A HEM . . . B 2 11.521 13.148 41.514 1 21.51 ? C2A HEM 430 A 1 
HETATM 7 C C3A HEM . . . B 2 11.66 12.153 42.437 1 22.38 ? C3A HEM 430 A 1 
HETATM 8 C C4A HEM . . . B 2 12.118 10.968 41.748 1 23.2 ? C4A HEM 430 A 1 
HETATM 9 C CMA HEM . . . B 2 11.35 12.265 43.919 1 21.9 ? CMA HEM 430 A 1 
HETATM 10 C CAA HEM . . . B 2 11.125 14.599 41.772 1 16.3 ? CAA HEM 430 A 1 
HETATM 11 C CBA HEM . . . B 2 12.164 15.401 42.53 1 11.25 ? CBA HEM 430 A 1 
HETATM 12 C CGA HEM . . . B 2 11.783 16.85 42.703 1 9.88 ? CGA HEM 430 A 1 
HETATM 13 O O1A HEM . . . B 2 10.646 17.126 43.128 1 7.01 ? O1A HEM 430 A 1 
HETATM 14 O O2A HEM . . . B 2 12.633 17.713 42.426 1 7.38 ? O2A HEM 430 A 1 
HETATM 15 C C1B HEM . . . B 2 12.67 8.584 41.735 1 25.02 ? C1B HEM 430 A 1 
HETATM 16 C C2B HEM . . . B 2 12.845 7.306 42.411 1 24.71 ? C2B HEM 430 A 1 
HETATM 17 C C3B HEM . . . B 2 13.202 6.426 41.445 1 25.47 ? C3B HEM 430 A 1 
HETATM 18 C C4B HEM . . . B 2 13.188 7.17 40.184 1 26.64 ? C4B HEM 430 A 1 
HETATM 19 C CMB HEM . . . B 2 12.513 7.006 43.853 1 24.09 ? CMB HEM 430 A 1 
HETATM 20 C CAB HEM . . . B 2 13.517 5.064 41.518 1 25.19 ? CAB HEM 430 A 1 
HETATM 21 C CBB HEM . . . B 2 13.005 4.031 42.386 1 24.37 ? CBB HEM 430 A 1 
HETATM 22 C C1C HEM . . . B 2 13.749 7.359 37.777 1 26.22 ? C1C HEM 430 A 1 
HETATM 23 C C2C HEM . . . B 2 14.29 6.771 36.537 1 26.62 ? C2C HEM 430 A 1 
HETATM 24 C C3C HEM . . . B 2 14.255 7.797 35.572 1 26.24 ? C3C HEM 430 A 1 
HETATM 25 C C4C HEM . . . B 2 13.765 8.986 36.3 1 25.54 ? C4C HEM 430 A 1 
HETATM 26 C CMC HEM . . . B 2 14.759 5.328 36.378 1 22.91 ? CMC HEM 430 A 1 
HETATM 27 C CAC HEM . . . B 2 14.515 7.782 34.189 1 23.34 ? CAC HEM 430 A 1 
HETATM 28 C CBC HEM . . . B 2 15.466 6.951 33.521 1 22.84 ? CBC HEM 430 A 1 
HETATM 29 C C1D HEM . . . B 2 12.911 11.31 36.284 1 23.93 ? C1D HEM 430 A 1 
HETATM 30 C C2D HEM . . . B 2 12.69 12.58 35.607 1 22.85 ? C2D HEM 430 A 1 
HETATM 31 C C3D HEM . . . B 2 12.278 13.429 36.555 1 22.57 ? C3D HEM 430 A 1 
HETATM 32 C C4D HEM . . . B 2 12.269 12.683 37.823 1 23.82 ? C4D HEM 430 A 1 
HETATM 33 C CMD HEM . . . B 2 12.864 12.923 34.135 1 21.52 ? CMD HEM 430 A 1 
HETATM 34 C CAD HEM . . . B 2 11.998 14.927 36.373 1 19.64 ? CAD HEM 430 A 1 
HETATM 35 C CBD HEM . . . B 2 10.547 15.356 36.274 1 15.83 ? CBD HEM 430 A 1 
HETATM 36 C CGD HEM . . . B 2 10.369 16.85 36.416 1 17.5 ? CGD HEM 430 A 1 
HETATM 37 O O1D HEM . . . B 2 9.22 17.333 36.328 1 15.42 ? O1D HEM 430 A 1 
HETATM 38 O O2D HEM . . . B 2 11.38 17.547 36.636 1 18.47 ? O2D HEM 430 A 1 
HETATM 39 N NA HEM . . . B 2 12.232 11.19 40.388 1 24.68 ? NA HEM 430 A 1 
HETATM 40 N NB HEM . . . B 2 12.895 8.489 40.372 1 26.64 ? NB HEM 430 A 1 
HETATM 41 N NC HEM . . . B 2 13.48 8.7 37.637 1 25.59 ? NC HEM 430 A 1 
HETATM 42 N ND HEM . . . B 2 12.64 11.376 37.639 1 25.39 ? ND HEM 430 A 1 
HETATM 43 FE FE HEM . . . B 2 12.869 9.914 39.003 1 27.26 ? FE HEM 430 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           304 
_model_server_stats.encode_time_ms          12 
_model_server_stats.element_count           43 
#