data_1P9R # _model_server_result.job_id 5lZ-3n7gnmBBEIea_JXKKw _model_server_result.datetime_utc '2024-10-13 00:20:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1p9r # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":601}' # _entry.id 1P9R # _exptl.entry_id 1P9R _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1P9R _cell.length_a 103.611 _cell.length_b 103.611 _cell.length_c 166.261 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1P9R _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B ZN ZN . A ZN 601 1_555 A SG CYS 307 A CYS 397 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.312 ? metalc ? metalc2 B ZN ZN . A ZN 601 1_555 A SG CYS 310 A CYS 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.329 ? metalc ? metalc3 B ZN ZN . A ZN 601 1_555 A SG CYS 340 A CYS 430 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.339 ? metalc ? metalc4 B ZN ZN . A ZN 601 1_555 A SG CYS 343 A CYS 433 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.333 ? covale ? covale1 A C ALA 39 A ALA 129 1_555 A N MSE 40 A MSE 130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale2 A C MSE 40 A MSE 130 1_555 A N LEU 41 A LEU 131 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale3 A C VAL 91 A VAL 181 1_555 A N MSE 92 A MSE 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale4 A C MSE 92 A MSE 182 1_555 A N ALA 93 A ALA 183 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale5 A C THR 123 A THR 213 1_555 A N MSE 124 A MSE 214 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale6 A C MSE 124 A MSE 214 1_555 A N PRO 125 A PRO 215 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale7 A C VAL 133 A VAL 223 1_555 A N MSE 134 A MSE 224 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale8 A C MSE 134 A MSE 224 1_555 A N ARG 135 A ARG 225 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale9 A C GLY 150 A GLY 240 1_555 A N MSE 151 A MSE 241 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale10 A C MSE 151 A MSE 241 1_555 A N THR 152 A THR 242 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale11 A C ASP 222 A ASP 312 1_555 A N MSE 223 A MSE 313 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale12 A C MSE 223 A MSE 313 1_555 A N THR 224 A THR 314 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale13 A C VAL 240 A VAL 330 1_555 A N MSE 241 A MSE 331 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale14 A C MSE 241 A MSE 331 1_555 A N VAL 242 A VAL 332 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale15 A C VAL 264 A VAL 354 1_555 A N MSE 265 A MSE 355 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale16 A C MSE 265 A MSE 355 1_555 A N SER 266 A SER 356 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale17 A C ASP 282 A ASP 372 1_555 A N MSE 283 A MSE 373 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale18 A C MSE 283 A MSE 373 1_555 A N GLY 284 A GLY 374 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale19 A C ALA 376 A ALA 466 1_555 A N MSE 377 A MSE 467 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale20 A C MSE 377 A MSE 467 1_555 A N GLU 378 A GLU 468 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale21 A C VAL 406 A VAL 496 1_555 A N MSE 407 A MSE 497 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale22 A C MSE 407 A MSE 497 1_555 A N ARG 408 A ARG 498 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1P9R _atom_sites.fract_transf_matrix[1][1] 0.009651 _atom_sites.fract_transf_matrix[1][2] 0.005572 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011145 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006015 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 601 601 ZN ZN . C 3 CL A 1 602 602 CL CL . D 4 HOH A 1 801 801 HOH HOH . D 4 HOH A 2 802 802 HOH HOH . D 4 HOH A 3 803 803 HOH HOH . D 4 HOH A 4 804 804 HOH HOH . D 4 HOH A 5 805 805 HOH HOH . D 4 HOH A 6 806 806 HOH HOH . D 4 HOH A 7 807 807 HOH HOH . D 4 HOH A 8 808 808 HOH HOH . D 4 HOH A 9 809 809 HOH HOH . D 4 HOH A 10 810 810 HOH HOH . D 4 HOH A 11 811 811 HOH HOH . D 4 HOH A 12 812 812 HOH HOH . D 4 HOH A 13 813 813 HOH HOH . D 4 HOH A 14 814 814 HOH HOH . D 4 HOH A 15 815 815 HOH HOH . D 4 HOH A 16 816 816 HOH HOH . D 4 HOH A 17 817 817 HOH HOH . D 4 HOH A 18 818 818 HOH HOH . D 4 HOH A 19 819 819 HOH HOH . D 4 HOH A 20 820 820 HOH HOH . D 4 HOH A 21 821 821 HOH HOH . D 4 HOH A 22 822 822 HOH HOH . D 4 HOH A 23 823 823 HOH HOH . D 4 HOH A 24 824 824 HOH HOH . D 4 HOH A 25 825 825 HOH HOH . D 4 HOH A 26 826 826 HOH HOH . D 4 HOH A 27 827 827 HOH HOH . D 4 HOH A 28 828 828 HOH HOH . D 4 HOH A 29 829 829 HOH HOH . D 4 HOH A 30 830 830 HOH HOH . D 4 HOH A 31 831 831 HOH HOH . D 4 HOH A 32 832 832 HOH HOH . D 4 HOH A 33 833 833 HOH HOH . D 4 HOH A 34 834 834 HOH HOH . D 4 HOH A 35 835 835 HOH HOH . D 4 HOH A 36 836 836 HOH HOH . D 4 HOH A 37 837 837 HOH HOH . D 4 HOH A 38 838 838 HOH HOH . D 4 HOH A 39 839 839 HOH HOH . D 4 HOH A 40 840 840 HOH HOH . D 4 HOH A 41 841 841 HOH HOH . D 4 HOH A 42 842 842 HOH HOH . D 4 HOH A 43 843 843 HOH HOH . D 4 HOH A 44 844 844 HOH HOH . D 4 HOH A 45 845 845 HOH HOH . D 4 HOH A 46 846 846 HOH HOH . D 4 HOH A 47 847 847 HOH HOH . D 4 HOH A 48 848 848 HOH HOH . D 4 HOH A 49 849 849 HOH HOH . D 4 HOH A 50 850 850 HOH HOH . D 4 HOH A 51 851 851 HOH HOH . D 4 HOH A 52 852 852 HOH HOH . D 4 HOH A 53 853 853 HOH HOH . D 4 HOH A 54 854 854 HOH HOH . D 4 HOH A 55 855 855 HOH HOH . D 4 HOH A 56 856 856 HOH HOH . D 4 HOH A 57 857 857 HOH HOH . D 4 HOH A 58 858 858 HOH HOH . D 4 HOH A 59 859 859 HOH HOH . D 4 HOH A 60 860 860 HOH HOH . D 4 HOH A 61 861 861 HOH HOH . D 4 HOH A 62 862 862 HOH HOH . D 4 HOH A 63 863 863 HOH HOH . D 4 HOH A 64 864 864 HOH HOH . D 4 HOH A 65 865 865 HOH HOH . D 4 HOH A 66 866 866 HOH HOH . D 4 HOH A 67 867 867 HOH HOH . D 4 HOH A 68 868 868 HOH HOH . D 4 HOH A 69 869 869 HOH HOH . D 4 HOH A 70 870 870 HOH HOH . D 4 HOH A 71 871 871 HOH HOH . D 4 HOH A 72 872 872 HOH HOH . D 4 HOH A 73 873 873 HOH HOH . D 4 HOH A 74 874 874 HOH HOH . D 4 HOH A 75 875 875 HOH HOH . D 4 HOH A 76 876 876 HOH HOH . D 4 HOH A 77 877 877 HOH HOH . D 4 HOH A 78 878 878 HOH HOH . D 4 HOH A 79 879 879 HOH HOH . D 4 HOH A 80 880 880 HOH HOH . D 4 HOH A 81 881 881 HOH HOH . D 4 HOH A 82 882 882 HOH HOH . D 4 HOH A 83 883 883 HOH HOH . D 4 HOH A 84 884 884 HOH HOH . D 4 HOH A 85 885 885 HOH HOH . D 4 HOH A 86 886 886 HOH HOH . D 4 HOH A 87 887 887 HOH HOH . D 4 HOH A 88 888 888 HOH HOH . D 4 HOH A 89 889 889 HOH HOH . D 4 HOH A 90 890 890 HOH HOH . D 4 HOH A 91 891 891 HOH HOH . D 4 HOH A 92 892 892 HOH HOH . D 4 HOH A 93 893 893 HOH HOH . D 4 HOH A 94 894 894 HOH HOH . D 4 HOH A 95 895 895 HOH HOH . D 4 HOH A 96 896 896 HOH HOH . D 4 HOH A 97 897 897 HOH HOH . D 4 HOH A 98 898 898 HOH HOH . D 4 HOH A 99 899 899 HOH HOH . D 4 HOH A 100 900 900 HOH HOH . D 4 HOH A 101 901 901 HOH HOH . D 4 HOH A 102 902 902 HOH HOH . D 4 HOH A 103 903 903 HOH HOH . D 4 HOH A 104 904 904 HOH HOH . D 4 HOH A 105 905 905 HOH HOH . D 4 HOH A 106 906 906 HOH HOH . D 4 HOH A 107 907 907 HOH HOH . D 4 HOH A 108 908 908 HOH HOH . D 4 HOH A 109 909 909 HOH HOH . D 4 HOH A 110 910 910 HOH HOH . D 4 HOH A 111 911 911 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x -5.918 _atom_site.Cartn_y -108.706 _atom_site.Cartn_z -125.63 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 51.13 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 601 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 36 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 276 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #