data_1PBO
#
_model_server_result.job_id            bzPkKTOegjolY9Vhv8SClw 
_model_server_result.datetime_utc      '2025-08-31 20:49:31' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1pbo 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":160}' 
#
_entry.id    1PBO 
#
_exptl.entry_id    1PBO 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              245.223 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            4-butyl-5-propyl-1,3-selenazol-2-amine 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          98.13 
_cell.angle_gamma         90 
_cell.entry_id            1PBO 
_cell.length_a            41.87 
_cell.length_b            65.18 
_cell.length_c            55.54 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1PBO 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C10 H18 N2 Se' 
_chem_comp.formula_weight    245.223 
_chem_comp.id                SES 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              4-butyl-5-propyl-1,3-selenazol-2-amine 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 SES sing 258 n n 
C1 H11 SES sing 259 n n 
C1 H12 SES sing 260 n n 
C1 H13 SES sing 261 n n 
C2 C3 SES sing 262 n n 
C2 H21 SES sing 263 n n 
C2 H22 SES sing 264 n n 
C3 C4 SES sing 265 n n 
C3 H31 SES sing 266 n n 
C3 H32 SES sing 267 n n 
C4 C25 SES sing 268 n n 
C4 H41 SES sing 269 n n 
C4 H42 SES sing 270 n n 
C11 C12 SES sing 271 n n 
C11 H111 SES sing 272 n n 
C11 H112 SES sing 273 n n 
C11 H113 SES sing 274 n n 
C12 C13 SES sing 275 n n 
C12 H121 SES sing 276 n n 
C12 H122 SES sing 277 n n 
C13 C24 SES sing 278 n n 
C13 H131 SES sing 279 n n 
C13 H132 SES sing 280 n n 
N21 C22 SES doub 281 n y 
N21 C25 SES sing 282 n y 
C22 N22 SES sing 283 n n 
C22 SE1 SES sing 284 n y 
N22 HN21 SES sing 285 n n 
N22 HN22 SES sing 286 n n 
SE1 C24 SES sing 287 n y 
C24 C25 SES doub 288 n y 
#
_atom_sites.entry_id                     1PBO 
_atom_sites.fract_transf_matrix[1][1]    0.023883 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.003412 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015342 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.018188 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 SES A 1 160 1 SES SES . 
D 2 SES B 1 160 2 SES SES . 
E 3 HOH A 1 161 3 HOH HOH . 
E 3 HOH A 2 162 5 HOH HOH . 
E 3 HOH A 3 163 7 HOH HOH . 
E 3 HOH A 4 164 11 HOH HOH . 
E 3 HOH A 5 165 17 HOH HOH . 
E 3 HOH A 6 166 18 HOH HOH . 
E 3 HOH A 7 167 19 HOH HOH . 
E 3 HOH A 8 168 20 HOH HOH . 
E 3 HOH A 9 169 21 HOH HOH . 
E 3 HOH A 10 170 26 HOH HOH . 
E 3 HOH A 11 171 27 HOH HOH . 
E 3 HOH A 12 172 28 HOH HOH . 
E 3 HOH A 13 173 31 HOH HOH . 
F 3 HOH B 1 161 1 HOH HOH . 
F 3 HOH B 2 162 2 HOH HOH . 
F 3 HOH B 3 163 4 HOH HOH . 
F 3 HOH B 4 164 6 HOH HOH . 
F 3 HOH B 5 165 8 HOH HOH . 
F 3 HOH B 6 166 9 HOH HOH . 
F 3 HOH B 7 167 10 HOH HOH . 
F 3 HOH B 8 168 13 HOH HOH . 
F 3 HOH B 9 169 14 HOH HOH . 
F 3 HOH B 10 170 15 HOH HOH . 
F 3 HOH B 11 171 16 HOH HOH . 
F 3 HOH B 12 172 22 HOH HOH . 
F 3 HOH B 13 173 23 HOH HOH . 
F 3 HOH B 14 174 24 HOH HOH . 
F 3 HOH B 15 175 25 HOH HOH . 
F 3 HOH B 16 176 30 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 SES . . . D 2 24.191 34.893 57.181 1 22.37 ? C1 SES 160 B 1 
HETATM 2 C C2 SES . . . D 2 24.527 33.577 56.54 1 21.41 ? C2 SES 160 B 1 
HETATM 3 C C3 SES . . . D 2 25.614 33.847 55.51 1 20.68 ? C3 SES 160 B 1 
HETATM 4 C C4 SES . . . D 2 26.662 34.913 55.963 1 18.53 ? C4 SES 160 B 1 
HETATM 5 C C11 SES . . . D 2 31.049 35.643 56.46 1 18.55 ? C11 SES 160 B 1 
HETATM 6 C C12 SES . . . D 2 31.117 34.241 55.842 1 17.91 ? C12 SES 160 B 1 
HETATM 7 C C13 SES . . . D 2 29.703 33.712 55.606 1 17.11 ? C13 SES 160 B 1 
HETATM 8 N N21 SES . . . D 2 27.292 36.016 53.823 1 15.59 ? N21 SES 160 B 1 
HETATM 9 C C22 SES . . . D 2 28.191 35.99 52.83 1 14.97 ? C22 SES 160 B 1 
HETATM 10 N N22 SES . . . D 2 28.025 36.746 51.74 1 15.79 ? N22 SES 160 B 1 
HETATM 11 SE SE1 SES . . . D 2 29.664 34.85 52.991 1 11.47 ? SE1 SES 160 B 1 
HETATM 12 C C24 SES . . . D 2 28.908 34.566 54.631 1 15.49 ? C24 SES 160 B 1 
HETATM 13 C C25 SES . . . D 2 27.631 35.207 54.836 1 16.65 ? C25 SES 160 B 1 
#
_model_server_stats.io_time_ms              31 
_model_server_stats.parse_time_ms           4 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           276 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           13 
#