data_1PBX # _model_server_result.job_id qtQ_4GZOGeTch8p7wN09qw _model_server_result.datetime_utc '2024-11-25 05:47:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1pbx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":145}' # _entry.id 1PBX # _exptl.entry_id 1PBX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 28.01 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CARBON MONOXIDE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 97.16 _cell.angle_gamma 90 _cell.entry_id 1PBX _cell.length_a 91.38 _cell.length_b 88.54 _cell.length_c 55.34 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1PBX _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ACE 1 A ACE 0 1_555 A N SER 2 A SER 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? metalc ? metalc1 A NE2 HIS 89 A HIS 88 1_555 C FE HEM . A HEM 144 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.141 ? metalc ? metalc2 C FE HEM . A HEM 144 1_555 D C CMO . A CMO 145 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.654 ? metalc ? metalc3 C FE HEM . A HEM 144 1_555 D O CMO . A CMO 145 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.694 ? metalc ? metalc4 B NE2 HIS 92 B HIS 92 1_555 E FE HEM . B HEM 148 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.152 ? metalc ? metalc5 E FE HEM . B HEM 148 1_555 F C CMO . B CMO 149 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.942 ? metalc ? metalc6 E FE HEM . B HEM 148 1_555 F O CMO . B CMO 149 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.78 ? # _chem_comp.formula 'C O' _chem_comp.formula_weight 28.01 _chem_comp.id CMO _chem_comp.mon_nstd_flag . _chem_comp.name 'CARBON MONOXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _chem_comp_bond.atom_id_1 C _chem_comp_bond.atom_id_2 O _chem_comp_bond.comp_id CMO _chem_comp_bond.value_order trip _chem_comp_bond.pdbx_ordinal 76 _chem_comp_bond.pdbx_stereo_config n _chem_comp_bond.pdbx_aromatic_flag n # _atom_sites.entry_id 1PBX _atom_sites.fract_transf_matrix[1][1] 0.010943 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001375 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011294 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018212 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 HEM A 1 144 144 HEM HEM . D 4 CMO A 1 145 144 CMO HEM . E 3 HEM B 1 148 148 HEM HEM . F 4 CMO B 1 149 148 CMO HEM . G 5 HOH A 1 450 450 HOH HOH . G 5 HOH A 2 451 451 HOH HOH . G 5 HOH A 3 455 455 HOH HOH . G 5 HOH A 4 457 457 HOH HOH . G 5 HOH A 5 458 458 HOH HOH . G 5 HOH A 6 459 459 HOH HOH . G 5 HOH A 7 463 463 HOH HOH . G 5 HOH A 8 469 469 HOH HOH . G 5 HOH A 9 470 470 HOH HOH . G 5 HOH A 10 480 480 HOH HOH . G 5 HOH A 11 481 481 HOH HOH . G 5 HOH A 12 482 482 HOH HOH . G 5 HOH A 13 484 484 HOH HOH . G 5 HOH A 14 485 485 HOH HOH . G 5 HOH A 15 487 487 HOH HOH . H 5 HOH B 1 452 452 HOH HOH . H 5 HOH B 2 453 453 HOH HOH . H 5 HOH B 3 454 454 HOH HOH . H 5 HOH B 4 456 456 HOH HOH . H 5 HOH B 5 461 461 HOH HOH . H 5 HOH B 6 466 466 HOH HOH . H 5 HOH B 7 467 467 HOH HOH . H 5 HOH B 8 468 468 HOH HOH . H 5 HOH B 9 471 471 HOH HOH . H 5 HOH B 10 472 472 HOH HOH . H 5 HOH B 11 483 483 HOH HOH . H 5 HOH B 12 486 486 HOH HOH . H 5 HOH B 13 488 488 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C CMO . . . D 4 11.584 -6.628 14.819 1 42.41 ? C CMO 145 A 1 HETATM 2 O O CMO . . . D 4 12.504 -6.06 15.096 1 38.72 ? O CMO 145 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 2 #