data_1PCR # _model_server_result.job_id AbDb6989EzJzIBr74u5Sfw _model_server_result.datetime_utc '2024-11-12 21:14:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1pcr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"U","auth_seq_id":704}' # _entry.id 1PCR # _exptl.entry_id 1PCR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 229.402 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'LAURYL DIMETHYLAMINE-N-OXIDE' _entity.pdbx_number_of_molecules 9 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1PCR _cell.length_a 141.3 _cell.length_b 141.3 _cell.length_c 187.2 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1PCR _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 7 I N N ? 7 J N N ? 7 K N N ? 7 R N N ? 7 S N N ? 7 T N N ? 7 U N N ? 7 V N N ? 7 W N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 153 L HIS 153 1_555 F MG BCL . L BCL 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.308 ? metalc ? metalc2 A NE2 HIS 173 L HIS 173 1_555 E MG BCL . L BCL 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.257 ? metalc ? metalc3 A NE2 HIS 190 L HIS 190 1_555 L FE FE . M FE 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.09 ? metalc ? metalc4 A NE2 HIS 230 L HIS 230 1_555 L FE FE . M FE 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.094 ? metalc ? metalc5 D MG BCL . L BCL 301 1_555 B NE2 HIS 182 M HIS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.216 ? metalc ? metalc6 E MG BCL . L BCL 302 1_555 N OBB BCL . M BCL 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.121 ? metalc ? metalc7 B NE2 HIS 202 M HIS 202 1_555 N MG BCL . M BCL 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.152 ? metalc ? metalc8 B NE2 HIS 219 M HIS 219 1_555 L FE FE . M FE 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.097 ? metalc ? metalc9 B OE2 GLU 234 M GLU 234 1_555 L FE FE . M FE 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.16 ? metalc ? metalc10 B OE1 GLU 234 M GLU 234 1_555 L FE FE . M FE 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.25 ? metalc ? metalc11 B NE2 HIS 266 M HIS 266 1_555 L FE FE . M FE 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.109 ? # _chem_comp.formula 'C14 H31 N O' _chem_comp.formula_weight 229.402 _chem_comp.id LDA _chem_comp.mon_nstd_flag . _chem_comp.name 'LAURYL DIMETHYLAMINE-N-OXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 O1 LDA sing 467 n n N1 CM1 LDA sing 468 n n N1 CM2 LDA sing 469 n n N1 C1 LDA sing 470 n n CM1 HM11 LDA sing 471 n n CM1 HM12 LDA sing 472 n n CM1 HM13 LDA sing 473 n n CM2 HM21 LDA sing 474 n n CM2 HM22 LDA sing 475 n n CM2 HM23 LDA sing 476 n n C1 C2 LDA sing 477 n n C1 H11 LDA sing 478 n n C1 H12 LDA sing 479 n n C2 C3 LDA sing 480 n n C2 H21 LDA sing 481 n n C2 H22 LDA sing 482 n n C3 C4 LDA sing 483 n n C3 H31 LDA sing 484 n n C3 H32 LDA sing 485 n n C4 C5 LDA sing 486 n n C4 H41 LDA sing 487 n n C4 H42 LDA sing 488 n n C5 C6 LDA sing 489 n n C5 H51 LDA sing 490 n n C5 H52 LDA sing 491 n n C6 C7 LDA sing 492 n n C6 H61 LDA sing 493 n n C6 H62 LDA sing 494 n n C7 C8 LDA sing 495 n n C7 H71 LDA sing 496 n n C7 H72 LDA sing 497 n n C8 C9 LDA sing 498 n n C8 H81 LDA sing 499 n n C8 H82 LDA sing 500 n n C9 C10 LDA sing 501 n n C9 H91 LDA sing 502 n n C9 H92 LDA sing 503 n n C10 C11 LDA sing 504 n n C10 H101 LDA sing 505 n n C10 H102 LDA sing 506 n n C11 C12 LDA sing 507 n n C11 H111 LDA sing 508 n n C11 H112 LDA sing 509 n n C12 H121 LDA sing 510 n n C12 H122 LDA sing 511 n n C12 H123 LDA sing 512 n n # _atom_sites.entry_id 1PCR _atom_sites.fract_transf_matrix[1][1] 0.007077 _atom_sites.fract_transf_matrix[1][2] 0.004086 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008172 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005342 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 BCL L 1 301 301 BCL BCL . E 4 BCL L 1 302 302 BCL BCL . F 4 BCL L 1 304 304 BCL BCL . G 5 BPH L 1 402 402 BPH BPH . H 6 U10 L 1 502 502 U10 U10 . I 7 LDA L 1 707 707 LDA LDA . J 7 LDA L 1 708 708 LDA LDA . K 7 LDA L 1 709 709 LDA LDA . L 8 FE M 1 500 500 FE FE . M 9 PO4 M 1 800 800 PO4 PO4 . N 4 BCL M 1 801 303 BCL BCL . O 5 BPH M 1 401 401 BPH BPH . P 6 U10 M 1 501 501 U10 U10 . Q 10 SPO M 1 600 600 SPO SPO . R 7 LDA M 1 701 701 LDA LDA . S 7 LDA M 1 702 702 LDA LDA . T 7 LDA M 1 703 703 LDA LDA . U 7 LDA M 1 704 704 LDA LDA . V 7 LDA M 1 705 705 LDA LDA . W 7 LDA M 1 706 706 LDA LDA . X 11 HOH L 1 710 1 HOH HOH . X 11 HOH L 2 711 2 HOH HOH . X 11 HOH L 3 712 3 HOH HOH . X 11 HOH L 4 713 5 HOH HOH . X 11 HOH L 5 714 6 HOH HOH . X 11 HOH L 6 715 7 HOH HOH . X 11 HOH L 7 716 9 HOH HOH . X 11 HOH L 8 717 10 HOH HOH . X 11 HOH L 9 718 21 HOH HOH . X 11 HOH L 10 719 23 HOH HOH . X 11 HOH L 11 720 24 HOH HOH . X 11 HOH L 12 721 25 HOH HOH . X 11 HOH L 13 722 26 HOH HOH . X 11 HOH L 14 723 27 HOH HOH . X 11 HOH L 15 724 32 HOH HOH . X 11 HOH L 16 725 52 HOH HOH . X 11 HOH L 17 726 55 HOH HOH . X 11 HOH L 18 727 56 HOH HOH . X 11 HOH L 19 728 59 HOH HOH . X 11 HOH L 20 729 62 HOH HOH . X 11 HOH L 21 730 63 HOH HOH . X 11 HOH L 22 731 65 HOH HOH . X 11 HOH L 23 732 66 HOH HOH . X 11 HOH L 24 733 68 HOH HOH . X 11 HOH L 25 734 70 HOH HOH . X 11 HOH L 26 735 72 HOH HOH . X 11 HOH L 27 736 73 HOH HOH . X 11 HOH L 28 737 74 HOH HOH . X 11 HOH L 29 738 76 HOH HOH . X 11 HOH L 30 739 78 HOH HOH . X 11 HOH L 31 740 118 HOH HOH . X 11 HOH L 32 741 121 HOH HOH . X 11 HOH L 33 742 127 HOH HOH . X 11 HOH L 34 743 132 HOH HOH . X 11 HOH L 35 744 143 HOH HOH . X 11 HOH L 36 745 145 HOH HOH . X 11 HOH L 37 746 150 HOH HOH . X 11 HOH L 38 747 152 HOH HOH . X 11 HOH L 39 748 153 HOH HOH . X 11 HOH L 40 749 156 HOH HOH . Y 11 HOH M 1 802 4 HOH HOH . Y 11 HOH M 2 803 8 HOH HOH . Y 11 HOH M 3 804 11 HOH HOH . Y 11 HOH M 4 805 12 HOH HOH . Y 11 HOH M 5 806 13 HOH HOH . Y 11 HOH M 6 807 14 HOH HOH . Y 11 HOH M 7 808 15 HOH HOH . Y 11 HOH M 8 809 16 HOH HOH . Y 11 HOH M 9 810 28 HOH HOH . Y 11 HOH M 10 811 29 HOH HOH . Y 11 HOH M 11 812 30 HOH HOH . Y 11 HOH M 12 813 31 HOH HOH . Y 11 HOH M 13 814 35 HOH HOH . Y 11 HOH M 14 815 42 HOH HOH . Y 11 HOH M 15 816 53 HOH HOH . Y 11 HOH M 16 817 60 HOH HOH . Y 11 HOH M 17 818 61 HOH HOH . Y 11 HOH M 18 819 64 HOH HOH . Y 11 HOH M 19 820 67 HOH HOH . Y 11 HOH M 20 821 75 HOH HOH . Y 11 HOH M 21 822 77 HOH HOH . Y 11 HOH M 22 823 79 HOH HOH . Y 11 HOH M 23 824 80 HOH HOH . Y 11 HOH M 24 825 81 HOH HOH . Y 11 HOH M 25 826 82 HOH HOH . Y 11 HOH M 26 827 83 HOH HOH . Y 11 HOH M 27 828 84 HOH HOH . Y 11 HOH M 28 829 85 HOH HOH . Y 11 HOH M 29 830 86 HOH HOH . Y 11 HOH M 30 831 87 HOH HOH . Y 11 HOH M 31 832 88 HOH HOH . Y 11 HOH M 32 833 89 HOH HOH . Y 11 HOH M 33 834 90 HOH HOH . Y 11 HOH M 34 835 93 HOH HOH . Y 11 HOH M 35 836 94 HOH HOH . Y 11 HOH M 36 837 95 HOH HOH . Y 11 HOH M 37 838 98 HOH HOH . Y 11 HOH M 38 839 99 HOH HOH . Y 11 HOH M 39 840 100 HOH HOH . Y 11 HOH M 40 841 117 HOH HOH . Y 11 HOH M 41 842 120 HOH HOH . Y 11 HOH M 42 843 128 HOH HOH . Y 11 HOH M 43 844 129 HOH HOH . Y 11 HOH M 44 845 134 HOH HOH . Y 11 HOH M 45 846 136 HOH HOH . Y 11 HOH M 46 847 147 HOH HOH . Y 11 HOH M 47 848 151 HOH HOH . Y 11 HOH M 48 849 154 HOH HOH . Y 11 HOH M 49 850 158 HOH HOH . Y 11 HOH M 50 851 159 HOH HOH . Z 11 HOH H 1 261 17 HOH HOH . Z 11 HOH H 2 262 18 HOH HOH . Z 11 HOH H 3 263 19 HOH HOH . Z 11 HOH H 4 264 20 HOH HOH . Z 11 HOH H 5 265 22 HOH HOH . Z 11 HOH H 6 266 33 HOH HOH . Z 11 HOH H 7 267 34 HOH HOH . Z 11 HOH H 8 268 36 HOH HOH . Z 11 HOH H 9 269 37 HOH HOH . Z 11 HOH H 10 270 38 HOH HOH . Z 11 HOH H 11 271 39 HOH HOH . Z 11 HOH H 12 272 40 HOH HOH . Z 11 HOH H 13 273 41 HOH HOH . Z 11 HOH H 14 274 43 HOH HOH . Z 11 HOH H 15 275 44 HOH HOH . Z 11 HOH H 16 276 45 HOH HOH . Z 11 HOH H 17 277 46 HOH HOH . Z 11 HOH H 18 278 47 HOH HOH . Z 11 HOH H 19 279 48 HOH HOH . Z 11 HOH H 20 280 49 HOH HOH . Z 11 HOH H 21 281 50 HOH HOH . Z 11 HOH H 22 282 51 HOH HOH . Z 11 HOH H 23 283 54 HOH HOH . Z 11 HOH H 24 284 57 HOH HOH . Z 11 HOH H 25 285 58 HOH HOH . Z 11 HOH H 26 286 69 HOH HOH . Z 11 HOH H 27 287 71 HOH HOH . Z 11 HOH H 28 288 91 HOH HOH . Z 11 HOH H 29 289 92 HOH HOH . Z 11 HOH H 30 290 96 HOH HOH . Z 11 HOH H 31 291 97 HOH HOH . Z 11 HOH H 32 292 101 HOH HOH . Z 11 HOH H 33 293 102 HOH HOH . Z 11 HOH H 34 294 103 HOH HOH . Z 11 HOH H 35 295 104 HOH HOH . Z 11 HOH H 36 296 105 HOH HOH . Z 11 HOH H 37 297 106 HOH HOH . Z 11 HOH H 38 298 107 HOH HOH . Z 11 HOH H 39 299 108 HOH HOH . Z 11 HOH H 40 300 109 HOH HOH . Z 11 HOH H 41 301 110 HOH HOH . Z 11 HOH H 42 302 111 HOH HOH . Z 11 HOH H 43 303 112 HOH HOH . Z 11 HOH H 44 304 113 HOH HOH . Z 11 HOH H 45 305 114 HOH HOH . Z 11 HOH H 46 306 115 HOH HOH . Z 11 HOH H 47 307 116 HOH HOH . Z 11 HOH H 48 308 119 HOH HOH . Z 11 HOH H 49 309 122 HOH HOH . Z 11 HOH H 50 310 123 HOH HOH . Z 11 HOH H 51 311 124 HOH HOH . Z 11 HOH H 52 312 125 HOH HOH . Z 11 HOH H 53 313 126 HOH HOH . Z 11 HOH H 54 314 130 HOH HOH . Z 11 HOH H 55 315 131 HOH HOH . Z 11 HOH H 56 316 133 HOH HOH . Z 11 HOH H 57 317 135 HOH HOH . Z 11 HOH H 58 318 137 HOH HOH . Z 11 HOH H 59 319 138 HOH HOH . Z 11 HOH H 60 320 139 HOH HOH . Z 11 HOH H 61 321 140 HOH HOH . Z 11 HOH H 62 322 141 HOH HOH . Z 11 HOH H 63 323 142 HOH HOH . Z 11 HOH H 64 324 144 HOH HOH . Z 11 HOH H 65 325 146 HOH HOH . Z 11 HOH H 66 326 148 HOH HOH . Z 11 HOH H 67 327 149 HOH HOH . Z 11 HOH H 68 328 155 HOH HOH . Z 11 HOH H 69 329 157 HOH HOH . Z 11 HOH H 70 330 160 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 LDA . . . U 7 5.968 84.987 4.319 1 109.86 ? N1 LDA 704 M 1 HETATM 2 O O1 LDA . . . U 7 5.622 83.942 3.719 1 109.52 ? O1 LDA 704 M 1 HETATM 3 C CM1 LDA . . . U 7 5.289 86.164 3.718 1 109.23 ? CM1 LDA 704 M 1 HETATM 4 C CM2 LDA . . . U 7 5.583 84.926 5.747 1 108.43 ? CM2 LDA 704 M 1 HETATM 5 C C1 LDA . . . U 7 7.46 85.176 4.24 1 105.46 ? C1 LDA 704 M 1 HETATM 6 C C2 LDA . . . U 7 8.826 84.564 4.611 1 96.2 ? C2 LDA 704 M 1 HETATM 7 C C3 LDA . . . U 7 9.947 85.616 4.638 1 89 ? C3 LDA 704 M 1 HETATM 8 C C4 LDA . . . U 7 11.189 85.128 5.407 1 84.32 ? C4 LDA 704 M 1 HETATM 9 C C5 LDA . . . U 7 10.956 85.089 6.928 1 75.5 ? C5 LDA 704 M 1 HETATM 10 C C6 LDA . . . U 7 12.236 85.367 7.733 1 68.09 ? C6 LDA 704 M 1 HETATM 11 C C7 LDA . . . U 7 11.928 85.497 9.221 1 61.34 ? C7 LDA 704 M 1 HETATM 12 C C8 LDA . . . U 7 12.88 86.458 9.932 1 59.02 ? C8 LDA 704 M 1 HETATM 13 C C9 LDA . . . U 7 12.52 86.588 11.414 1 54.77 ? C9 LDA 704 M 1 HETATM 14 C C10 LDA . . . U 7 13.157 87.818 12.038 1 52.51 ? C10 LDA 704 M 1 HETATM 15 C C11 LDA . . . U 7 12.637 88.063 13.462 1 55.03 ? C11 LDA 704 M 1 HETATM 16 C C12 LDA . . . U 7 13.415 89.195 14.158 1 48.43 ? C12 LDA 704 M 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 337 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 16 #