data_1PD9 # _model_server_result.job_id iuR9Kl1hBly-YS9GzoV3SQ _model_server_result.datetime_utc '2024-11-05 06:44:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1pd9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":188}' # _entry.id 1PD9 # _exptl.entry_id 1PD9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1PD9 _cell.length_a 85.431 _cell.length_b 85.431 _cell.length_c 78.357 _cell.Z_PDB 9 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1PD9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'H 3' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 344 n n S O2 SO4 doub 345 n n S O3 SO4 sing 346 n n S O4 SO4 sing 347 n n # _atom_sites.entry_id 1PD9 _atom_sites.fract_transf_matrix[1][1] 0.011705 _atom_sites.fract_transf_matrix[1][2] 0.006758 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013516 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012762 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 188 188 SO4 SUL . C 2 SO4 A 1 189 189 SO4 SUL . D 3 CO4 A 1 187 187 CO4 COE . E 4 HOH A 1 190 190 HOH WAT . E 4 HOH A 2 191 191 HOH WAT . E 4 HOH A 3 192 192 HOH WAT . E 4 HOH A 4 193 193 HOH WAT . E 4 HOH A 5 194 194 HOH WAT . E 4 HOH A 6 195 195 HOH WAT . E 4 HOH A 7 196 196 HOH WAT . E 4 HOH A 8 197 197 HOH WAT . E 4 HOH A 9 198 198 HOH WAT . E 4 HOH A 10 199 199 HOH WAT . E 4 HOH A 11 200 200 HOH WAT . E 4 HOH A 12 201 201 HOH WAT . E 4 HOH A 13 202 202 HOH WAT . E 4 HOH A 14 203 203 HOH WAT . E 4 HOH A 15 204 204 HOH WAT . E 4 HOH A 16 205 205 HOH WAT . E 4 HOH A 17 206 206 HOH WAT . E 4 HOH A 18 207 207 HOH WAT . E 4 HOH A 19 208 208 HOH WAT . E 4 HOH A 20 209 209 HOH WAT . E 4 HOH A 21 210 210 HOH WAT . E 4 HOH A 22 211 211 HOH WAT . E 4 HOH A 23 212 212 HOH WAT . E 4 HOH A 24 213 213 HOH WAT . E 4 HOH A 25 214 214 HOH WAT . E 4 HOH A 26 215 215 HOH WAT . E 4 HOH A 27 216 216 HOH WAT . E 4 HOH A 28 217 217 HOH WAT . E 4 HOH A 29 218 218 HOH WAT . E 4 HOH A 30 219 219 HOH WAT . E 4 HOH A 31 220 220 HOH WAT . E 4 HOH A 32 221 221 HOH WAT . E 4 HOH A 33 222 222 HOH WAT . E 4 HOH A 34 223 223 HOH WAT . E 4 HOH A 35 224 224 HOH WAT . E 4 HOH A 36 225 225 HOH WAT . E 4 HOH A 37 226 226 HOH WAT . E 4 HOH A 38 227 227 HOH WAT . E 4 HOH A 39 228 228 HOH WAT . E 4 HOH A 40 229 229 HOH WAT . E 4 HOH A 41 230 230 HOH WAT . E 4 HOH A 42 231 231 HOH WAT . E 4 HOH A 43 232 232 HOH WAT . E 4 HOH A 44 233 233 HOH WAT . E 4 HOH A 45 234 234 HOH WAT . E 4 HOH A 46 235 235 HOH WAT . E 4 HOH A 47 236 236 HOH WAT . E 4 HOH A 48 237 237 HOH WAT . E 4 HOH A 49 238 238 HOH WAT . E 4 HOH A 50 239 239 HOH WAT . E 4 HOH A 51 240 240 HOH WAT . E 4 HOH A 52 241 241 HOH WAT . E 4 HOH A 53 242 242 HOH WAT . E 4 HOH A 54 243 243 HOH WAT . E 4 HOH A 55 244 244 HOH WAT . E 4 HOH A 56 245 245 HOH WAT . E 4 HOH A 57 246 246 HOH WAT . E 4 HOH A 58 247 247 HOH WAT . E 4 HOH A 59 248 248 HOH WAT . E 4 HOH A 60 249 249 HOH WAT . E 4 HOH A 61 250 250 HOH WAT . E 4 HOH A 62 251 251 HOH WAT . E 4 HOH A 63 252 252 HOH WAT . E 4 HOH A 64 253 253 HOH WAT . E 4 HOH A 65 254 254 HOH WAT . E 4 HOH A 66 255 255 HOH WAT . E 4 HOH A 67 256 256 HOH WAT . E 4 HOH A 68 257 257 HOH WAT . E 4 HOH A 69 258 258 HOH WAT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . B 2 25.891 8.705 8.801 1 22.66 ? S SO4 188 A 1 HETATM 2 O O1 SO4 . . . B 2 26.67 7.47 8.495 1 22.66 ? O1 SO4 188 A 1 HETATM 3 O O2 SO4 . . . B 2 24.485 8.53 8.443 1 23.03 ? O2 SO4 188 A 1 HETATM 4 O O3 SO4 . . . B 2 25.982 8.885 10.295 1 23.93 ? O3 SO4 188 A 1 HETATM 5 O O4 SO4 . . . B 2 26.601 9.845 8.148 1 22.7 ? O4 SO4 188 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 317 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 5 #