data_1PIE # _model_server_result.job_id 5Vt4PxE9thBhnt0iObpkSA _model_server_result.datetime_utc '2024-11-27 18:25:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1pie # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":400}' # _entry.id 1PIE # _exptl.entry_id 1PIE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 180.156 _entity.id 2 _entity.src_method man _entity.type non-polymer _entity.pdbx_description alpha-D-galactopyranose _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1PIE _cell.length_a 143.4 _cell.length_b 143.4 _cell.length_c 143.4 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1PIE _symmetry.cell_setting ? _symmetry.Int_Tables_number 197 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 2 3' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C6 H12 O6' _chem_comp.formula_weight 180.156 _chem_comp.id GLA _chem_comp.mon_nstd_flag . _chem_comp.name alpha-D-galactopyranose _chem_comp.type 'd-saccharide, alpha linking' _chem_comp.pdbx_synonyms 'alpha-D-galactose;D-galactose;galactose;ALPHA D-GALACTOSE' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 GLA sing 83 n n C1 O1 GLA sing 84 n n C1 O5 GLA sing 85 n n C1 H1 GLA sing 86 n n C2 C3 GLA sing 87 n n C2 O2 GLA sing 88 n n C2 H2 GLA sing 89 n n C3 C4 GLA sing 90 n n C3 O3 GLA sing 91 n n C3 H3 GLA sing 92 n n C4 C5 GLA sing 93 n n C4 O4 GLA sing 94 n n C4 H4 GLA sing 95 n n C5 C6 GLA sing 96 n n C5 O5 GLA sing 97 n n C5 H5 GLA sing 98 n n C6 O6 GLA sing 99 n n C6 H61 GLA sing 100 n n C6 H62 GLA sing 101 n n O1 HO1 GLA sing 102 n n O2 HO2 GLA sing 103 n n O3 HO3 GLA sing 104 n n O4 HO4 GLA sing 105 n n O6 HO6 GLA sing 106 n n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.identifier _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version GLA DGalpa 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 GLA a-D-galactopyranose 'COMMON NAME' GMML 1 GLA a-D-Galp 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 GLA Gal 'SNFG CARBOHYDRATE SYMBOL' GMML 1 # _atom_sites.entry_id 1PIE _atom_sites.fract_transf_matrix[1][1] 0.006974 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006974 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006974 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GLA A 1 400 1 GLA GAL . C 3 PO4 A 1 401 2 PO4 PI . D 4 HOH A 1 402 3 HOH HOH . D 4 HOH A 2 403 4 HOH HOH . D 4 HOH A 3 404 5 HOH HOH . D 4 HOH A 4 405 6 HOH HOH . D 4 HOH A 5 406 7 HOH HOH . D 4 HOH A 6 407 8 HOH HOH . D 4 HOH A 7 408 9 HOH HOH . D 4 HOH A 8 409 10 HOH HOH . D 4 HOH A 9 410 11 HOH HOH . D 4 HOH A 10 411 12 HOH HOH . D 4 HOH A 11 412 13 HOH HOH . D 4 HOH A 12 413 14 HOH HOH . D 4 HOH A 13 414 15 HOH HOH . D 4 HOH A 14 415 16 HOH HOH . D 4 HOH A 15 416 17 HOH HOH . D 4 HOH A 16 417 18 HOH HOH . D 4 HOH A 17 418 19 HOH HOH . D 4 HOH A 18 419 20 HOH HOH . D 4 HOH A 19 420 21 HOH HOH . D 4 HOH A 20 421 22 HOH HOH . D 4 HOH A 21 422 23 HOH HOH . D 4 HOH A 22 423 24 HOH HOH . D 4 HOH A 23 424 25 HOH HOH . D 4 HOH A 24 425 26 HOH HOH . D 4 HOH A 25 426 27 HOH HOH . D 4 HOH A 26 427 28 HOH HOH . D 4 HOH A 27 428 29 HOH HOH . D 4 HOH A 28 429 30 HOH HOH . D 4 HOH A 29 430 31 HOH HOH . D 4 HOH A 30 431 32 HOH HOH . D 4 HOH A 31 432 33 HOH HOH . D 4 HOH A 32 433 34 HOH HOH . D 4 HOH A 33 434 35 HOH HOH . D 4 HOH A 34 435 36 HOH HOH . D 4 HOH A 35 436 37 HOH HOH . D 4 HOH A 36 437 38 HOH HOH . D 4 HOH A 37 438 39 HOH HOH . D 4 HOH A 38 439 40 HOH HOH . D 4 HOH A 39 440 41 HOH HOH . D 4 HOH A 40 441 42 HOH HOH . D 4 HOH A 41 442 43 HOH HOH . D 4 HOH A 42 443 44 HOH HOH . D 4 HOH A 43 444 45 HOH HOH . D 4 HOH A 44 445 46 HOH HOH . D 4 HOH A 45 446 47 HOH HOH . D 4 HOH A 46 447 48 HOH HOH . D 4 HOH A 47 448 49 HOH HOH . D 4 HOH A 48 449 50 HOH HOH . D 4 HOH A 49 450 51 HOH HOH . D 4 HOH A 50 451 52 HOH HOH . D 4 HOH A 51 452 53 HOH HOH . D 4 HOH A 52 453 54 HOH HOH . D 4 HOH A 53 454 55 HOH HOH . D 4 HOH A 54 455 56 HOH HOH . D 4 HOH A 55 456 57 HOH HOH . D 4 HOH A 56 457 58 HOH HOH . D 4 HOH A 57 458 59 HOH HOH . D 4 HOH A 58 459 60 HOH HOH . D 4 HOH A 59 460 61 HOH HOH . D 4 HOH A 60 461 62 HOH HOH . D 4 HOH A 61 462 63 HOH HOH . D 4 HOH A 62 463 64 HOH HOH . D 4 HOH A 63 464 65 HOH HOH . D 4 HOH A 64 465 66 HOH HOH . D 4 HOH A 65 466 67 HOH HOH . D 4 HOH A 66 467 68 HOH HOH . D 4 HOH A 67 468 69 HOH HOH . D 4 HOH A 68 469 70 HOH HOH . D 4 HOH A 69 470 71 HOH HOH . D 4 HOH A 70 471 72 HOH HOH . D 4 HOH A 71 472 73 HOH HOH . D 4 HOH A 72 473 74 HOH HOH . D 4 HOH A 73 474 75 HOH HOH . D 4 HOH A 74 475 76 HOH HOH . D 4 HOH A 75 476 77 HOH HOH . D 4 HOH A 76 477 78 HOH HOH . D 4 HOH A 77 478 79 HOH HOH . D 4 HOH A 78 479 80 HOH HOH . D 4 HOH A 79 480 81 HOH HOH . D 4 HOH A 80 481 82 HOH HOH . D 4 HOH A 81 482 83 HOH HOH . D 4 HOH A 82 483 84 HOH HOH . D 4 HOH A 83 484 85 HOH HOH . D 4 HOH A 84 485 86 HOH HOH . D 4 HOH A 85 486 87 HOH HOH . D 4 HOH A 86 487 88 HOH HOH . D 4 HOH A 87 488 89 HOH HOH . D 4 HOH A 88 489 90 HOH HOH . D 4 HOH A 89 490 91 HOH HOH . D 4 HOH A 90 491 92 HOH HOH . D 4 HOH A 91 492 93 HOH HOH . D 4 HOH A 92 493 94 HOH HOH . D 4 HOH A 93 494 95 HOH HOH . D 4 HOH A 94 495 96 HOH HOH . D 4 HOH A 95 496 97 HOH HOH . D 4 HOH A 96 497 98 HOH HOH . D 4 HOH A 97 498 99 HOH HOH . D 4 HOH A 98 499 100 HOH HOH . D 4 HOH A 99 500 101 HOH HOH . D 4 HOH A 100 501 102 HOH HOH . D 4 HOH A 101 502 103 HOH HOH . D 4 HOH A 102 503 104 HOH HOH . D 4 HOH A 103 504 105 HOH HOH . D 4 HOH A 104 505 106 HOH HOH . D 4 HOH A 105 506 107 HOH HOH . D 4 HOH A 106 507 108 HOH HOH . D 4 HOH A 107 508 109 HOH HOH . D 4 HOH A 108 509 110 HOH HOH . D 4 HOH A 109 510 111 HOH HOH . D 4 HOH A 110 511 112 HOH HOH . D 4 HOH A 111 512 113 HOH HOH . D 4 HOH A 112 513 114 HOH HOH . D 4 HOH A 113 514 115 HOH HOH . D 4 HOH A 114 515 116 HOH HOH . D 4 HOH A 115 516 117 HOH HOH . D 4 HOH A 116 517 118 HOH HOH . D 4 HOH A 117 518 119 HOH HOH . D 4 HOH A 118 519 120 HOH HOH . D 4 HOH A 119 520 121 HOH HOH . D 4 HOH A 120 521 122 HOH HOH . D 4 HOH A 121 522 123 HOH HOH . D 4 HOH A 122 523 124 HOH HOH . D 4 HOH A 123 524 125 HOH HOH . D 4 HOH A 124 525 126 HOH HOH . D 4 HOH A 125 526 127 HOH HOH . D 4 HOH A 126 527 128 HOH HOH . D 4 HOH A 127 528 129 HOH HOH . D 4 HOH A 128 529 130 HOH HOH . D 4 HOH A 129 530 131 HOH HOH . D 4 HOH A 130 531 132 HOH HOH . D 4 HOH A 131 532 133 HOH HOH . D 4 HOH A 132 533 134 HOH HOH . D 4 HOH A 133 534 135 HOH HOH . D 4 HOH A 134 535 136 HOH HOH . D 4 HOH A 135 536 137 HOH HOH . D 4 HOH A 136 537 138 HOH HOH . D 4 HOH A 137 538 139 HOH HOH . D 4 HOH A 138 539 140 HOH HOH . D 4 HOH A 139 540 141 HOH HOH . D 4 HOH A 140 541 142 HOH HOH . D 4 HOH A 141 542 143 HOH HOH . D 4 HOH A 142 543 144 HOH HOH . D 4 HOH A 143 544 145 HOH HOH . D 4 HOH A 144 545 146 HOH HOH . D 4 HOH A 145 546 147 HOH HOH . D 4 HOH A 146 547 148 HOH HOH . D 4 HOH A 147 548 149 HOH HOH . D 4 HOH A 148 549 150 HOH HOH . D 4 HOH A 149 550 151 HOH HOH . D 4 HOH A 150 551 152 HOH HOH . D 4 HOH A 151 552 153 HOH HOH . D 4 HOH A 152 553 154 HOH HOH . D 4 HOH A 153 554 155 HOH HOH . D 4 HOH A 154 555 156 HOH HOH . D 4 HOH A 155 556 157 HOH HOH . D 4 HOH A 156 557 158 HOH HOH . D 4 HOH A 157 558 159 HOH HOH . D 4 HOH A 158 559 160 HOH HOH . D 4 HOH A 159 560 161 HOH HOH . D 4 HOH A 160 561 162 HOH HOH . D 4 HOH A 161 562 163 HOH HOH . D 4 HOH A 162 563 164 HOH HOH . D 4 HOH A 163 564 165 HOH HOH . D 4 HOH A 164 565 166 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GLA . . . B 2 116.538 29.144 64.813 1 24.77 ? C1 GLA 400 A 1 HETATM 2 C C2 GLA . . . B 2 116.654 30.603 65.188 1 24.5 ? C2 GLA 400 A 1 HETATM 3 C C3 GLA . . . B 2 116.715 31.517 63.997 1 36.38 ? C3 GLA 400 A 1 HETATM 4 C C4 GLA . . . B 2 117.966 31.157 63.25 1 37.83 ? C4 GLA 400 A 1 HETATM 5 C C5 GLA . . . B 2 117.845 29.678 62.83 1 28.84 ? C5 GLA 400 A 1 HETATM 6 C C6 GLA . . . B 2 119.044 29.139 62.076 1 20.42 ? C6 GLA 400 A 1 HETATM 7 O O1 GLA . . . B 2 115.322 29.026 64.092 1 41.3 ? O1 GLA 400 A 1 HETATM 8 O O2 GLA . . . B 2 115.557 31.03 65.959 1 39.5 ? O2 GLA 400 A 1 HETATM 9 O O3 GLA . . . B 2 116.866 32.854 64.469 1 24.12 ? O3 GLA 400 A 1 HETATM 10 O O4 GLA . . . B 2 119.128 31.469 64.017 1 29.28 ? O4 GLA 400 A 1 HETATM 11 O O5 GLA . . . B 2 117.633 28.79 63.942 1 30.85 ? O5 GLA 400 A 1 HETATM 12 O O6 GLA . . . B 2 119.074 29.749 60.777 1 26.91 ? O6 GLA 400 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 309 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 12 #