data_1PJS # _model_server_result.job_id PzGN5SUtQ9RD78WnYzyIZg _model_server_result.datetime_utc '2024-11-13 06:24:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1pjs # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":507}' # _entry.id 1PJS # _exptl.entry_id 1PJS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1PJS _cell.length_a 60.124 _cell.length_b 120.686 _cell.length_c 130.178 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1PJS _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C SER 127 A SER 127 1_555 A N SEP 128 A SEP 128 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.406 ? covale ? covale2 A C SEP 128 A SEP 128 1_555 A N GLY 129 A GLY 129 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.351 ? covale ? covale3 B C SER 127 B SER 127 1_555 B N SEP 128 B SEP 128 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.39 ? covale ? covale4 B C SEP 128 B SEP 128 1_555 B N GLY 129 B GLY 129 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.359 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 358 n n P O2 PO4 sing 359 n n P O3 PO4 sing 360 n n P O4 PO4 sing 361 n n # _atom_sites.entry_id 1PJS _atom_sites.fract_transf_matrix[1][1] 0.016632 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008286 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007682 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SAH A 1 501 501 SAH SAH . D 3 NAD A 1 502 502 NAD NAD . E 4 PGE A 1 505 505 PGE PGE . F 4 PGE A 1 506 506 PGE PGE . G 5 PO4 B 1 507 507 PO4 PO4 . H 2 SAH B 1 503 503 SAH SAH . I 3 NAD B 1 504 504 NAD NAD . J 6 HOH A 1 507 2 HOH HOH . J 6 HOH A 2 508 3 HOH HOH . J 6 HOH A 3 509 4 HOH HOH . J 6 HOH A 4 510 6 HOH HOH . J 6 HOH A 5 511 7 HOH HOH . J 6 HOH A 6 512 8 HOH HOH . J 6 HOH A 7 513 9 HOH HOH . J 6 HOH A 8 514 11 HOH HOH . J 6 HOH A 9 515 12 HOH HOH . J 6 HOH A 10 516 15 HOH HOH . J 6 HOH A 11 517 16 HOH HOH . J 6 HOH A 12 518 17 HOH HOH . J 6 HOH A 13 519 18 HOH HOH . J 6 HOH A 14 520 19 HOH HOH . J 6 HOH A 15 521 20 HOH HOH . J 6 HOH A 16 522 21 HOH HOH . J 6 HOH A 17 523 22 HOH HOH . J 6 HOH A 18 524 24 HOH HOH . J 6 HOH A 19 525 42 HOH HOH . J 6 HOH A 20 526 44 HOH HOH . J 6 HOH A 21 527 45 HOH HOH . J 6 HOH A 22 528 46 HOH HOH . J 6 HOH A 23 529 47 HOH HOH . J 6 HOH A 24 530 49 HOH HOH . J 6 HOH A 25 531 50 HOH HOH . J 6 HOH A 26 532 51 HOH HOH . J 6 HOH A 27 533 52 HOH HOH . J 6 HOH A 28 534 62 HOH HOH . J 6 HOH A 29 535 64 HOH HOH . J 6 HOH A 30 536 65 HOH HOH . J 6 HOH A 31 537 66 HOH HOH . J 6 HOH A 32 538 67 HOH HOH . J 6 HOH A 33 539 68 HOH HOH . J 6 HOH A 34 540 69 HOH HOH . J 6 HOH A 35 541 70 HOH HOH . J 6 HOH A 36 542 71 HOH HOH . J 6 HOH A 37 543 72 HOH HOH . J 6 HOH A 38 544 73 HOH HOH . J 6 HOH A 39 545 74 HOH HOH . J 6 HOH A 40 546 75 HOH HOH . J 6 HOH A 41 547 76 HOH HOH . J 6 HOH A 42 548 77 HOH HOH . J 6 HOH A 43 549 79 HOH HOH . J 6 HOH A 44 550 82 HOH HOH . J 6 HOH A 45 551 85 HOH HOH . J 6 HOH A 46 552 86 HOH HOH . J 6 HOH A 47 553 87 HOH HOH . J 6 HOH A 48 554 89 HOH HOH . J 6 HOH A 49 555 90 HOH HOH . J 6 HOH A 50 556 91 HOH HOH . J 6 HOH A 51 557 92 HOH HOH . J 6 HOH A 52 558 93 HOH HOH . J 6 HOH A 53 559 94 HOH HOH . J 6 HOH A 54 560 95 HOH HOH . J 6 HOH A 55 561 96 HOH HOH . J 6 HOH A 56 562 97 HOH HOH . J 6 HOH A 57 563 98 HOH HOH . J 6 HOH A 58 564 99 HOH HOH . J 6 HOH A 59 565 100 HOH HOH . J 6 HOH A 60 566 116 HOH HOH . J 6 HOH A 61 567 136 HOH HOH . J 6 HOH A 62 568 137 HOH HOH . J 6 HOH A 63 569 138 HOH HOH . J 6 HOH A 64 570 140 HOH HOH . J 6 HOH A 65 571 141 HOH HOH . J 6 HOH A 66 572 142 HOH HOH . J 6 HOH A 67 573 144 HOH HOH . J 6 HOH A 68 574 156 HOH HOH . J 6 HOH A 69 575 157 HOH HOH . J 6 HOH A 70 576 159 HOH HOH . J 6 HOH A 71 577 162 HOH HOH . J 6 HOH A 72 578 164 HOH HOH . J 6 HOH A 73 579 168 HOH HOH . J 6 HOH A 74 580 169 HOH HOH . J 6 HOH A 75 581 170 HOH HOH . J 6 HOH A 76 582 171 HOH HOH . J 6 HOH A 77 583 176 HOH HOH . J 6 HOH A 78 584 180 HOH HOH . J 6 HOH A 79 585 181 HOH HOH . J 6 HOH A 80 586 182 HOH HOH . J 6 HOH A 81 587 183 HOH HOH . J 6 HOH A 82 588 185 HOH HOH . J 6 HOH A 83 589 186 HOH HOH . J 6 HOH A 84 590 187 HOH HOH . J 6 HOH A 85 591 188 HOH HOH . J 6 HOH A 86 592 192 HOH HOH . J 6 HOH A 87 593 193 HOH HOH . J 6 HOH A 88 594 196 HOH HOH . J 6 HOH A 89 595 197 HOH HOH . J 6 HOH A 90 596 198 HOH HOH . J 6 HOH A 91 597 199 HOH HOH . J 6 HOH A 92 598 200 HOH HOH . J 6 HOH A 93 599 201 HOH HOH . J 6 HOH A 94 600 202 HOH HOH . J 6 HOH A 95 601 203 HOH HOH . J 6 HOH A 96 602 204 HOH HOH . J 6 HOH A 97 603 209 HOH HOH . J 6 HOH A 98 604 212 HOH HOH . K 6 HOH B 1 508 1 HOH HOH . K 6 HOH B 2 509 5 HOH HOH . K 6 HOH B 3 510 10 HOH HOH . K 6 HOH B 4 511 13 HOH HOH . K 6 HOH B 5 512 14 HOH HOH . K 6 HOH B 6 513 23 HOH HOH . K 6 HOH B 7 514 25 HOH HOH . K 6 HOH B 8 515 26 HOH HOH . K 6 HOH B 9 516 27 HOH HOH . K 6 HOH B 10 517 28 HOH HOH . K 6 HOH B 11 518 29 HOH HOH . K 6 HOH B 12 519 30 HOH HOH . K 6 HOH B 13 520 31 HOH HOH . K 6 HOH B 14 521 32 HOH HOH . K 6 HOH B 15 522 33 HOH HOH . K 6 HOH B 16 523 34 HOH HOH . K 6 HOH B 17 524 35 HOH HOH . K 6 HOH B 18 525 36 HOH HOH . K 6 HOH B 19 526 37 HOH HOH . K 6 HOH B 20 527 38 HOH HOH . K 6 HOH B 21 528 39 HOH HOH . K 6 HOH B 22 529 40 HOH HOH . K 6 HOH B 23 530 41 HOH HOH . K 6 HOH B 24 531 43 HOH HOH . K 6 HOH B 25 532 48 HOH HOH . K 6 HOH B 26 533 53 HOH HOH . K 6 HOH B 27 534 54 HOH HOH . K 6 HOH B 28 535 55 HOH HOH . K 6 HOH B 29 536 56 HOH HOH . K 6 HOH B 30 537 57 HOH HOH . K 6 HOH B 31 538 58 HOH HOH . K 6 HOH B 32 539 59 HOH HOH . K 6 HOH B 33 540 60 HOH HOH . K 6 HOH B 34 541 61 HOH HOH . K 6 HOH B 35 542 63 HOH HOH . K 6 HOH B 36 543 78 HOH HOH . K 6 HOH B 37 544 80 HOH HOH . K 6 HOH B 38 545 81 HOH HOH . K 6 HOH B 39 546 83 HOH HOH . K 6 HOH B 40 547 84 HOH HOH . K 6 HOH B 41 548 88 HOH HOH . K 6 HOH B 42 549 101 HOH HOH . K 6 HOH B 43 550 102 HOH HOH . K 6 HOH B 44 551 103 HOH HOH . K 6 HOH B 45 552 104 HOH HOH . K 6 HOH B 46 553 105 HOH HOH . K 6 HOH B 47 554 106 HOH HOH . K 6 HOH B 48 555 107 HOH HOH . K 6 HOH B 49 556 108 HOH HOH . K 6 HOH B 50 557 109 HOH HOH . K 6 HOH B 51 558 110 HOH HOH . K 6 HOH B 52 559 111 HOH HOH . K 6 HOH B 53 560 112 HOH HOH . K 6 HOH B 54 561 113 HOH HOH . K 6 HOH B 55 562 114 HOH HOH . K 6 HOH B 56 563 115 HOH HOH . K 6 HOH B 57 564 117 HOH HOH . K 6 HOH B 58 565 118 HOH HOH . K 6 HOH B 59 566 119 HOH HOH . K 6 HOH B 60 567 120 HOH HOH . K 6 HOH B 61 568 121 HOH HOH . K 6 HOH B 62 569 122 HOH HOH . K 6 HOH B 63 570 123 HOH HOH . K 6 HOH B 64 571 124 HOH HOH . K 6 HOH B 65 572 125 HOH HOH . K 6 HOH B 66 573 126 HOH HOH . K 6 HOH B 67 574 127 HOH HOH . K 6 HOH B 68 575 128 HOH HOH . K 6 HOH B 69 576 129 HOH HOH . K 6 HOH B 70 577 130 HOH HOH . K 6 HOH B 71 578 131 HOH HOH . K 6 HOH B 72 579 132 HOH HOH . K 6 HOH B 73 580 133 HOH HOH . K 6 HOH B 74 581 134 HOH HOH . K 6 HOH B 75 582 135 HOH HOH . K 6 HOH B 76 583 139 HOH HOH . K 6 HOH B 77 584 143 HOH HOH . K 6 HOH B 78 585 145 HOH HOH . K 6 HOH B 79 586 146 HOH HOH . K 6 HOH B 80 587 147 HOH HOH . K 6 HOH B 81 588 148 HOH HOH . K 6 HOH B 82 589 149 HOH HOH . K 6 HOH B 83 590 150 HOH HOH . K 6 HOH B 84 591 151 HOH HOH . K 6 HOH B 85 592 152 HOH HOH . K 6 HOH B 86 593 153 HOH HOH . K 6 HOH B 87 594 154 HOH HOH . K 6 HOH B 88 595 155 HOH HOH . K 6 HOH B 89 596 158 HOH HOH . K 6 HOH B 90 597 160 HOH HOH . K 6 HOH B 91 598 161 HOH HOH . K 6 HOH B 92 599 163 HOH HOH . K 6 HOH B 93 600 165 HOH HOH . K 6 HOH B 94 601 166 HOH HOH . K 6 HOH B 95 602 167 HOH HOH . K 6 HOH B 96 603 172 HOH HOH . K 6 HOH B 97 604 173 HOH HOH . K 6 HOH B 98 605 174 HOH HOH . K 6 HOH B 99 606 175 HOH HOH . K 6 HOH B 100 607 177 HOH HOH . K 6 HOH B 101 608 178 HOH HOH . K 6 HOH B 102 609 179 HOH HOH . K 6 HOH B 103 610 184 HOH HOH . K 6 HOH B 104 611 189 HOH HOH . K 6 HOH B 105 612 190 HOH HOH . K 6 HOH B 106 613 191 HOH HOH . K 6 HOH B 107 614 194 HOH HOH . K 6 HOH B 108 615 195 HOH HOH . K 6 HOH B 109 616 205 HOH HOH . K 6 HOH B 110 617 206 HOH HOH . K 6 HOH B 111 618 207 HOH HOH . K 6 HOH B 112 619 208 HOH HOH . K 6 HOH B 113 620 210 HOH HOH . K 6 HOH B 114 621 211 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . G 5 -34.677 129.228 25.512 1 51.91 ? P PO4 507 B 1 HETATM 2 O O1 PO4 . . . G 5 -36.01 129.649 25.003 1 51.12 ? O1 PO4 507 B 1 HETATM 3 O O2 PO4 . . . G 5 -33.66 130.217 25.071 1 49.73 ? O2 PO4 507 B 1 HETATM 4 O O3 PO4 . . . G 5 -34.352 127.908 24.907 1 53.68 ? O3 PO4 507 B 1 HETATM 5 O O4 PO4 . . . G 5 -34.711 129.088 26.994 1 50.07 ? O4 PO4 507 B 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 285 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 5 #