data_1PK2 # _model_server_result.job_id 9UfN9qphjcyd03s1MvF7Ow _model_server_result.datetime_utc '2024-10-11 02:19:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1pk2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":91}' # _entry.id 1PK2 # _exptl.entry_id 1PK2 _exptl.method 'SOLUTION NMR' # _entity.details ? _entity.formula_weight 131.173 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '6-AMINOHEXANOIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1PK2 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1PK2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 7 A CYS 7 1_555 A SG CYS 88 A CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? disulf ? disulf2 A SG CYS 28 A CYS 28 1_555 A SG CYS 70 A CYS 70 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.01 ? disulf ? disulf3 A SG CYS 59 A CYS 59 1_555 A SG CYS 83 A CYS 83 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.008 ? # _chem_comp.formula 'C6 H13 N O2' _chem_comp.formula_weight 131.173 _chem_comp.id ACA _chem_comp.mon_nstd_flag . _chem_comp.name '6-AMINOHEXANOIC ACID' _chem_comp.type 'peptide linking' _chem_comp.pdbx_synonyms 'AMINOCAPROIC ACID' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O ACA doub 1 n n C OXT ACA sing 2 n n C C2 ACA sing 3 n n OXT HXT ACA sing 4 n n C2 C3 ACA sing 5 n n C2 H21 ACA sing 6 n n C2 H22 ACA sing 7 n n C3 C4 ACA sing 8 n n C3 H31 ACA sing 9 n n C3 H32 ACA sing 10 n n C4 C5 ACA sing 11 n n C4 H41 ACA sing 12 n n C4 H42 ACA sing 13 n n C5 C6 ACA sing 14 n n C5 H51 ACA sing 15 n n C5 H52 ACA sing 16 n n C6 N ACA sing 17 n n C6 H61 ACA sing 18 n n C6 H62 ACA sing 19 n n N H ACA sing 20 n n N H2 ACA sing 21 n n # _atom_sites.entry_id 1PK2 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id ACA _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 91 _pdbx_nonpoly_scheme.auth_seq_num 91 _pdbx_nonpoly_scheme.pdb_mon_id ACA _pdbx_nonpoly_scheme.auth_mon_id AHA _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACA . . . B 2 -8.841 -4.085 5.308 1 0 ? C ACA 91 A 1 HETATM 2 O O ACA . . . B 2 -8.799 -5.262 4.998 1 0 ? O ACA 91 A 1 HETATM 3 O OXT ACA . . . B 2 -9.744 -3.503 5.879 1 0 ? OXT ACA 91 A 1 HETATM 4 C C2 ACA . . . B 2 -7.623 -3.238 4.921 1 0 ? C2 ACA 91 A 1 HETATM 5 C C3 ACA . . . B 2 -7.234 -2.323 6.084 1 0 ? C3 ACA 91 A 1 HETATM 6 C C4 ACA . . . B 2 -5.783 -1.872 5.91 1 0 ? C4 ACA 91 A 1 HETATM 7 C C5 ACA . . . B 2 -5.051 -1.969 7.257 1 0 ? C5 ACA 91 A 1 HETATM 8 C C6 ACA . . . B 2 -3.608 -1.516 7.062 1 0 ? C6 ACA 91 A 1 HETATM 9 N N ACA . . . B 2 -2.803 -1.743 8.292 1 0 ? N ACA 91 A 1 HETATM 10 H H2 ACA . . . B 2 -2.469 -0.816 8.661 1 0 ? H2 ACA 91 A 1 HETATM 11 H H21 ACA . . . B 2 -7.867 -2.649 4.06 1 0 ? H21 ACA 91 A 1 HETATM 12 H H22 ACA . . . B 2 -6.806 -3.891 4.682 1 0 ? H22 ACA 91 A 1 HETATM 13 H H31 ACA . . . B 2 -7.341 -2.857 7.017 1 0 ? H31 ACA 91 A 1 HETATM 14 H H32 ACA . . . B 2 -7.882 -1.459 6.099 1 0 ? H32 ACA 91 A 1 HETATM 15 H H41 ACA . . . B 2 -5.763 -0.851 5.56 1 0 ? H41 ACA 91 A 1 HETATM 16 H H42 ACA . . . B 2 -5.291 -2.502 5.185 1 0 ? H42 ACA 91 A 1 HETATM 17 H H51 ACA . . . B 2 -5.07 -2.988 7.609 1 0 ? H51 ACA 91 A 1 HETATM 18 H H52 ACA . . . B 2 -5.538 -1.333 7.982 1 0 ? H52 ACA 91 A 1 HETATM 19 H H61 ACA . . . B 2 -3.598 -0.464 6.827 1 0 ? H61 ACA 91 A 1 HETATM 20 H H62 ACA . . . B 2 -3.164 -2.065 6.24 1 0 ? H62 ACA 91 A 1 HETATM 21 H H ACA . . . B 2 -3.387 -2.213 9.012 1 0 ? H ACA 91 A 1 HETATM 22 H HN63 ACA . . . B 2 -1.977 -2.345 8.063 1 0 ? HN63 ACA 91 A 1 # _model_server_stats.io_time_ms 27 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 1 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 22 #