data_1PMV # _model_server_result.job_id APBDH0p2ZdJdx7FXlHMoXA _model_server_result.datetime_utc '2024-11-04 22:51:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1pmv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 1PMV # _exptl.entry_id 1PMV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 220.226 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2,6-DIHYDROANTHRA/1,9-CD/PYRAZOL-6-ONE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1PMV _cell.length_a 48.207 _cell.length_b 73.086 _cell.length_c 106.044 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1PMV _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C14 H8 N2 O' _chem_comp.formula_weight 220.226 _chem_comp.id 537 _chem_comp.mon_nstd_flag . _chem_comp.name 2,6-DIHYDROANTHRA/1,9-CD/PYRAZOL-6-ONE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 537 doub 1 n y C1 C6 537 sing 2 n y C1 HC1 537 sing 3 n n C2 C3 537 sing 4 n y C2 HC2 537 sing 5 n n C3 C4 537 doub 6 n y C3 C21 537 sing 7 n y C4 C5 537 sing 8 n y C4 C20 537 sing 9 n n C5 C6 537 doub 10 n y C5 HC5 537 sing 11 n n C6 HC6 537 sing 12 n n C11 C12 537 doub 13 n y C11 C16 537 sing 14 n y C11 C21 537 sing 15 n y C12 C13 537 sing 16 n y C12 N24 537 sing 17 n y C13 C14 537 doub 18 n y C13 H13 537 sing 19 n n C14 C15 537 sing 20 n y C14 H14 537 sing 21 n n C15 C16 537 doub 22 n y C15 H15 537 sing 23 n n C16 C20 537 sing 24 n n C20 O22 537 doub 25 n n C21 N23 537 doub 26 n y N23 N24 537 sing 27 n y N24 H24 537 sing 28 n n # _atom_sites.entry_id 1PMV _atom_sites.fract_transf_matrix[1][1] 0.020744 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013683 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00943 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 537 A 1 501 501 537 537 . C 3 HOH A 1 1001 1001 HOH HOH . C 3 HOH A 2 1002 1002 HOH HOH . C 3 HOH A 3 1003 1003 HOH HOH . C 3 HOH A 4 1004 1004 HOH HOH . C 3 HOH A 5 1005 1005 HOH HOH . C 3 HOH A 6 1006 1006 HOH HOH . C 3 HOH A 7 1007 1007 HOH HOH . C 3 HOH A 8 1008 1008 HOH HOH . C 3 HOH A 9 1009 1009 HOH HOH . C 3 HOH A 10 1010 1010 HOH HOH . C 3 HOH A 11 1012 1012 HOH HOH . C 3 HOH A 12 1014 1014 HOH HOH . C 3 HOH A 13 1015 1015 HOH HOH . C 3 HOH A 14 1016 1016 HOH HOH . C 3 HOH A 15 1017 1017 HOH HOH . C 3 HOH A 16 1018 1018 HOH HOH . C 3 HOH A 17 1019 1019 HOH HOH . C 3 HOH A 18 1020 1020 HOH HOH . C 3 HOH A 19 1022 1022 HOH HOH . C 3 HOH A 20 1023 1023 HOH HOH . C 3 HOH A 21 1026 1026 HOH HOH . C 3 HOH A 22 1027 1027 HOH HOH . C 3 HOH A 23 1028 1028 HOH HOH . C 3 HOH A 24 1029 1029 HOH HOH . C 3 HOH A 25 1031 1031 HOH HOH . C 3 HOH A 26 1033 1033 HOH HOH . C 3 HOH A 27 1034 1034 HOH HOH . C 3 HOH A 28 1035 1035 HOH HOH . C 3 HOH A 29 1036 1036 HOH HOH . C 3 HOH A 30 1038 1038 HOH HOH . C 3 HOH A 31 1040 1040 HOH HOH . C 3 HOH A 32 1042 1042 HOH HOH . C 3 HOH A 33 1044 1044 HOH HOH . C 3 HOH A 34 1045 1045 HOH HOH . C 3 HOH A 35 1046 1046 HOH HOH . C 3 HOH A 36 1047 1047 HOH HOH . C 3 HOH A 37 1048 1048 HOH HOH . C 3 HOH A 38 1049 1049 HOH HOH . C 3 HOH A 39 1050 1050 HOH HOH . C 3 HOH A 40 1051 1051 HOH HOH . C 3 HOH A 41 1052 1052 HOH HOH . C 3 HOH A 42 1053 1053 HOH HOH . C 3 HOH A 43 1054 1054 HOH HOH . C 3 HOH A 44 1055 1055 HOH HOH . C 3 HOH A 45 1057 1057 HOH HOH . C 3 HOH A 46 1058 1058 HOH HOH . C 3 HOH A 47 1059 1059 HOH HOH . C 3 HOH A 48 1060 1060 HOH HOH . C 3 HOH A 49 1062 1062 HOH HOH . C 3 HOH A 50 1063 1063 HOH HOH . C 3 HOH A 51 1065 1065 HOH HOH . C 3 HOH A 52 1067 1067 HOH HOH . C 3 HOH A 53 1068 1068 HOH HOH . C 3 HOH A 54 1069 1069 HOH HOH . C 3 HOH A 55 1070 1070 HOH HOH . C 3 HOH A 56 1071 1071 HOH HOH . C 3 HOH A 57 1072 1072 HOH HOH . C 3 HOH A 58 1078 1078 HOH HOH . C 3 HOH A 59 1079 1079 HOH HOH . C 3 HOH A 60 1081 1081 HOH HOH . C 3 HOH A 61 1082 1082 HOH HOH . C 3 HOH A 62 1083 1083 HOH HOH . C 3 HOH A 63 1087 1087 HOH HOH . C 3 HOH A 64 1088 1088 HOH HOH . C 3 HOH A 65 1090 1090 HOH HOH . C 3 HOH A 66 1091 1091 HOH HOH . C 3 HOH A 67 1092 1092 HOH HOH . C 3 HOH A 68 1093 1093 HOH HOH . C 3 HOH A 69 1096 1096 HOH HOH . C 3 HOH A 70 1097 1097 HOH HOH . C 3 HOH A 71 1098 1098 HOH HOH . C 3 HOH A 72 1100 1100 HOH HOH . C 3 HOH A 73 1101 1101 HOH HOH . C 3 HOH A 74 1102 1102 HOH HOH . C 3 HOH A 75 1104 1104 HOH HOH . C 3 HOH A 76 1105 1105 HOH HOH . C 3 HOH A 77 1106 1106 HOH HOH . C 3 HOH A 78 1107 1107 HOH HOH . C 3 HOH A 79 1108 1108 HOH HOH . C 3 HOH A 80 1109 1109 HOH HOH . C 3 HOH A 81 1110 1110 HOH HOH . C 3 HOH A 82 1112 1112 HOH HOH . C 3 HOH A 83 1114 1114 HOH HOH . C 3 HOH A 84 1115 1115 HOH HOH . C 3 HOH A 85 1116 1116 HOH HOH . C 3 HOH A 86 1119 1119 HOH HOH . C 3 HOH A 87 1121 1121 HOH HOH . C 3 HOH A 88 1122 1122 HOH HOH . C 3 HOH A 89 1123 1123 HOH HOH . C 3 HOH A 90 1126 1126 HOH HOH . C 3 HOH A 91 1127 1127 HOH HOH . C 3 HOH A 92 1130 1130 HOH HOH . C 3 HOH A 93 1131 1131 HOH HOH . C 3 HOH A 94 1133 1133 HOH HOH . C 3 HOH A 95 1134 1134 HOH HOH . C 3 HOH A 96 1135 1135 HOH HOH . C 3 HOH A 97 1138 1138 HOH HOH . C 3 HOH A 98 1141 1141 HOH HOH . C 3 HOH A 99 1142 1142 HOH HOH . C 3 HOH A 100 1144 1144 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 537 . . . B 2 22.016 31.29 21.128 1 40.02 ? C1 537 501 A 1 HETATM 2 C C2 537 . . . B 2 20.912 31.009 20.271 1 39.47 ? C2 537 501 A 1 HETATM 3 C C3 537 . . . B 2 20.529 29.681 20.012 1 39.04 ? C3 537 501 A 1 HETATM 4 C C4 537 . . . B 2 21.262 28.58 20.629 1 39.48 ? C4 537 501 A 1 HETATM 5 C C5 537 . . . B 2 22.366 28.883 21.485 1 41.97 ? C5 537 501 A 1 HETATM 6 C C6 537 . . . B 2 22.746 30.233 21.735 1 40.4 ? C6 537 501 A 1 HETATM 7 C C11 537 . . . B 2 19.057 28.006 18.917 1 37.37 ? C11 537 501 A 1 HETATM 8 C C12 537 . . . B 2 17.98 27.811 18.086 1 35.87 ? C12 537 501 A 1 HETATM 9 C C13 537 . . . B 2 17.497 26.544 17.753 1 38.64 ? C13 537 501 A 1 HETATM 10 C C14 537 . . . B 2 18.149 25.389 18.305 1 39.52 ? C14 537 501 A 1 HETATM 11 C C15 537 . . . B 2 19.27 25.531 19.179 1 37.31 ? C15 537 501 A 1 HETATM 12 C C16 537 . . . B 2 19.741 26.848 19.498 1 37.77 ? C16 537 501 A 1 HETATM 13 C C20 537 . . . B 2 20.891 27.138 20.399 1 37.59 ? C20 537 501 A 1 HETATM 14 C C21 537 . . . B 2 19.357 29.372 19.111 1 39.06 ? C21 537 501 A 1 HETATM 15 O O22 537 . . . B 2 21.522 26.216 20.93 1 43.6 ? O22 537 501 A 1 HETATM 16 N N23 537 . . . B 2 18.449 30.098 18.371 1 36.28 ? N23 537 501 A 1 HETATM 17 N N24 537 . . . B 2 17.637 29.107 17.77 1 37.87 ? N24 537 501 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 290 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 17 #