data_1PO3 # _model_server_result.job_id GgwXefqxO2VkTUe-lMOpig _model_server_result.datetime_utc '2024-11-21 14:49:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1po3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":743}' # _entry.id 1PO3 # _exptl.entry_id 1PO3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 189.1 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CITRATE ANION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment 'diferric dicitrate' _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 110.58 _cell.angle_gamma 90 _cell.entry_id 1PO3 _cell.length_a 85.489 _cell.length_b 147.003 _cell.length_c 96.131 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1PO3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F 1 1 B,G,H,I,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 G N N ? 2 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 GLN 580 A GLN 570 1_555 F FE FE . A FE 745 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.226 ? metalc ? metalc2 C OB2 FLC . A FLC 742 1_555 E FE FE . A FE 744 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.17 ? metalc ? metalc3 C OHB FLC . A FLC 742 1_555 E FE FE . A FE 744 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.5 ? metalc ? metalc4 C OG2 FLC . A FLC 742 1_555 E FE FE . A FE 744 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.453 ? metalc ? metalc5 C OA2 FLC . A FLC 742 1_555 F FE FE . A FE 745 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.226 ? metalc ? metalc6 C OHB FLC . A FLC 742 1_555 F FE FE . A FE 745 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.519 ? metalc ? metalc7 D OG2 FLC . A FLC 743 1_555 E FE FE . A FE 744 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.14 ? metalc ? metalc8 D OHB FLC . A FLC 743 1_555 E FE FE . A FE 744 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.237 ? metalc ? metalc9 D OB2 FLC . A FLC 743 1_555 E FE FE . A FE 744 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.691 ? metalc ? metalc10 D OHB FLC . A FLC 743 1_555 F FE FE . A FE 745 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.657 ? metalc ? metalc11 G OHB FLC . B FLC 742 1_555 I FE FE . B FE 744 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? metalc ? metalc12 G OB2 FLC . B FLC 742 1_555 I FE FE . B FE 744 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.838 ? metalc ? metalc13 G OG2 FLC . B FLC 742 1_555 I FE FE . B FE 744 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.386 ? metalc ? metalc14 G OA2 FLC . B FLC 742 1_555 J FE FE . B FE 745 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.088 ? metalc ? metalc15 G OHB FLC . B FLC 742 1_555 J FE FE . B FE 745 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.364 ? metalc ? metalc16 H OG2 FLC . B FLC 743 1_555 I FE FE . B FE 744 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.954 ? metalc ? metalc17 H OHB FLC . B FLC 743 1_555 I FE FE . B FE 744 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.505 ? metalc ? metalc18 H OHB FLC . B FLC 743 1_555 J FE FE . B FE 745 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.103 ? metalc ? metalc19 H OB1 FLC . B FLC 743 1_555 J FE FE . B FE 745 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.117 ? metalc ? metalc20 H OA1 FLC . B FLC 743 1_555 J FE FE . B FE 745 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.503 ? # _chem_comp.formula 'C6 H5 O7 -3' _chem_comp.formula_weight 189.1 _chem_comp.id FLC _chem_comp.mon_nstd_flag . _chem_comp.name 'CITRATE ANION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAC CA FLC sing 70 n n CAC OA1 FLC doub 71 n n CAC OA2 FLC sing 72 n n CA CB FLC sing 73 n n CA HA1 FLC sing 74 n n CA HA2 FLC sing 75 n n CB CBC FLC sing 76 n n CB CG FLC sing 77 n n CB OHB FLC sing 78 n n CBC OB1 FLC doub 79 n n CBC OB2 FLC sing 80 n n CG CGC FLC sing 81 n n CG HG1 FLC sing 82 n n CG HG2 FLC sing 83 n n CGC OG1 FLC doub 84 n n CGC OG2 FLC sing 85 n n OHB HOB FLC sing 86 n n # _atom_sites.entry_id 1PO3 _atom_sites.fract_transf_matrix[1][1] 0.011697 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004393 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006803 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011112 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FLC A 1 742 1 FLC FLC . D 2 FLC A 1 743 2 FLC FLC . E 3 FE A 1 744 3 FE FE . F 3 FE A 1 745 4 FE FE . G 2 FLC B 1 742 1 FLC FLC . H 2 FLC B 1 743 2 FLC FLC . I 3 FE B 1 744 3 FE FE . J 3 FE B 1 745 4 FE FE . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAC FLC . . . D 2 15.913 -1.819 25.861 1 56.03 ? CAC FLC 743 A 1 HETATM 2 C CA FLC . . . D 2 15.742 -1.969 27.45 1 56.03 ? CA FLC 743 A 1 HETATM 3 C CB FLC . . . D 2 17.034 -2.191 28.459 1 56.03 ? CB FLC 743 A 1 HETATM 4 C CBC FLC . . . D 2 18.482 -2.391 27.84 1 56.03 ? CBC FLC 743 A 1 HETATM 5 C CG FLC . . . D 2 16.689 -2.763 29.979 1 56.03 ? CG FLC 743 A 1 HETATM 6 C CGC FLC . . . D 2 17.856 -3.097 31.03 1 56.03 ? CGC FLC 743 A 1 HETATM 7 O OA1 FLC . . . D 2 16.749 -2.465 25.204 1 56.03 ? OA1 FLC 743 A 1 HETATM 8 O OA2 FLC . . . D 2 15.164 -1.019 25.312 1 56.03 ? OA2 FLC 743 A 1 HETATM 9 O OB1 FLC . . . D 2 18.845 -1.776 26.827 1 56.03 ? OB1 FLC 743 A 1 HETATM 10 O OB2 FLC . . . D 2 19.212 -3.197 28.434 1 56.03 ? OB2 FLC 743 A 1 HETATM 11 O OG1 FLC . . . D 2 18.01 -2.36 31.973 1 56.03 ? OG1 FLC 743 A 1 HETATM 12 O OG2 FLC . . . D 2 18.587 -4.084 30.817 1 56.03 ? OG2 FLC 743 A 1 HETATM 13 O OHB FLC . . . D 2 16.976 -3.575 28.214 1 56.03 ? OHB FLC 743 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 272 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 13 #