data_1POD # _model_server_result.job_id Zt0CN0pAelrvsfGCEcBwRw _model_server_result.datetime_utc '2024-12-06 07:25:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1pod # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 1POD # _exptl.entry_id 1POD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1POD _cell.length_a 76.3 _cell.length_b 76.3 _cell.length_c 90.6 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1POD _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 12_556 x,x-y,-z+7/6 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 0 0 105.7 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 26 A CYS 26 1_555 A SG CYS 117 A CYS 117 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.766 ? disulf ? disulf2 A SG CYS 28 A CYS 28 1_555 A SG CYS 44 A CYS 44 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.943 ? disulf ? disulf3 A SG CYS 43 A CYS 43 1_555 A SG CYS 97 A CYS 97 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.92 ? disulf ? disulf4 A SG CYS 49 A CYS 49 1_555 A SG CYS 124 A CYS 124 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.355 ? disulf ? disulf5 A SG CYS 50 A CYS 50 1_555 A SG CYS 90 A CYS 90 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.809 ? disulf ? disulf6 A SG CYS 59 A CYS 59 1_555 A SG CYS 83 A CYS 83 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.006 ? disulf ? disulf7 A SG CYS 77 A CYS 77 1_555 A SG CYS 88 A CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.103 ? metalc ? metalc1 A O PHE 23 A PHE 23 1_555 B CA CA . A CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.626 ? metalc ? metalc2 A O GLY 25 A GLY 25 1_555 B CA CA . A CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.372 ? metalc ? metalc3 A O TYR 112 A TYR 112 1_555 B CA CA . A CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.19 ? metalc ? metalc4 A OD1 ASN 114 A ASN 114 1_555 B CA CA . A CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.615 ? metalc ? metalc5 C O HOH . A HOH 304 1_555 B CA CA . A CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.041 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1POD _atom_sites.fract_transf_matrix[1][1] 0.013106 _atom_sites.fract_transf_matrix[1][2] 0.007567 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015134 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011038 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 401 401 CA CA . C 3 HOH A 1 201 201 HOH HOH . C 3 HOH A 2 202 202 HOH HOH . C 3 HOH A 3 203 203 HOH HOH . C 3 HOH A 4 204 204 HOH HOH . C 3 HOH A 5 206 206 HOH HOH . C 3 HOH A 6 207 207 HOH HOH . C 3 HOH A 7 208 208 HOH HOH . C 3 HOH A 8 209 209 HOH HOH . C 3 HOH A 9 210 210 HOH HOH . C 3 HOH A 10 211 211 HOH HOH . C 3 HOH A 11 212 212 HOH HOH . C 3 HOH A 12 213 213 HOH HOH . C 3 HOH A 13 214 214 HOH HOH . C 3 HOH A 14 215 215 HOH HOH . C 3 HOH A 15 216 216 HOH HOH . C 3 HOH A 16 217 217 HOH HOH . C 3 HOH A 17 218 218 HOH HOH . C 3 HOH A 18 219 219 HOH HOH . C 3 HOH A 19 220 220 HOH HOH . C 3 HOH A 20 221 221 HOH HOH . C 3 HOH A 21 222 222 HOH HOH . C 3 HOH A 22 224 224 HOH HOH . C 3 HOH A 23 225 225 HOH HOH . C 3 HOH A 24 226 226 HOH HOH . C 3 HOH A 25 227 227 HOH HOH . C 3 HOH A 26 228 228 HOH HOH . C 3 HOH A 27 229 229 HOH HOH . C 3 HOH A 28 230 230 HOH HOH . C 3 HOH A 29 231 231 HOH HOH . C 3 HOH A 30 232 232 HOH HOH . C 3 HOH A 31 233 233 HOH HOH . C 3 HOH A 32 234 234 HOH HOH . C 3 HOH A 33 235 235 HOH HOH . C 3 HOH A 34 236 236 HOH HOH . C 3 HOH A 35 237 237 HOH HOH . C 3 HOH A 36 238 238 HOH HOH . C 3 HOH A 37 239 239 HOH HOH . C 3 HOH A 38 240 240 HOH HOH . C 3 HOH A 39 241 241 HOH HOH . C 3 HOH A 40 242 242 HOH HOH . C 3 HOH A 41 243 243 HOH HOH . C 3 HOH A 42 244 244 HOH HOH . C 3 HOH A 43 245 245 HOH HOH . C 3 HOH A 44 246 246 HOH HOH . C 3 HOH A 45 247 247 HOH HOH . C 3 HOH A 46 248 248 HOH HOH . C 3 HOH A 47 249 249 HOH HOH . C 3 HOH A 48 250 250 HOH HOH . C 3 HOH A 49 251 251 HOH HOH . C 3 HOH A 50 252 252 HOH HOH . C 3 HOH A 51 254 254 HOH HOH . C 3 HOH A 52 255 255 HOH HOH . C 3 HOH A 53 256 256 HOH HOH . C 3 HOH A 54 257 257 HOH HOH . C 3 HOH A 55 258 258 HOH HOH . C 3 HOH A 56 259 259 HOH HOH . C 3 HOH A 57 260 260 HOH HOH . C 3 HOH A 58 261 261 HOH HOH . C 3 HOH A 59 262 262 HOH HOH . C 3 HOH A 60 263 263 HOH HOH . C 3 HOH A 61 264 264 HOH HOH . C 3 HOH A 62 265 265 HOH HOH . C 3 HOH A 63 266 266 HOH HOH . C 3 HOH A 64 267 267 HOH HOH . C 3 HOH A 65 268 268 HOH HOH . C 3 HOH A 66 269 269 HOH HOH . C 3 HOH A 67 270 270 HOH HOH . C 3 HOH A 68 271 271 HOH HOH . C 3 HOH A 69 272 272 HOH HOH . C 3 HOH A 70 273 273 HOH HOH . C 3 HOH A 71 274 274 HOH HOH . C 3 HOH A 72 275 275 HOH HOH . C 3 HOH A 73 276 276 HOH HOH . C 3 HOH A 74 277 277 HOH HOH . C 3 HOH A 75 278 278 HOH HOH . C 3 HOH A 76 279 279 HOH HOH . C 3 HOH A 77 280 280 HOH HOH . C 3 HOH A 78 281 281 HOH HOH . C 3 HOH A 79 282 282 HOH HOH . C 3 HOH A 80 283 283 HOH HOH . C 3 HOH A 81 284 284 HOH HOH . C 3 HOH A 82 285 285 HOH HOH . C 3 HOH A 83 286 286 HOH HOH . C 3 HOH A 84 287 287 HOH HOH . C 3 HOH A 85 288 288 HOH HOH . C 3 HOH A 86 289 289 HOH HOH . C 3 HOH A 87 290 290 HOH HOH . C 3 HOH A 88 291 291 HOH HOH . C 3 HOH A 89 292 292 HOH HOH . C 3 HOH A 90 293 293 HOH HOH . C 3 HOH A 91 294 294 HOH HOH . C 3 HOH A 92 296 296 HOH HOH . C 3 HOH A 93 297 297 HOH HOH . C 3 HOH A 94 298 298 HOH HOH . C 3 HOH A 95 299 299 HOH HOH . C 3 HOH A 96 300 300 HOH HOH . C 3 HOH A 97 301 301 HOH HOH . C 3 HOH A 98 302 302 HOH HOH . C 3 HOH A 99 303 303 HOH HOH . C 3 HOH A 100 304 304 HOH HOH . C 3 HOH A 101 305 305 HOH HOH . C 3 HOH A 102 306 306 HOH HOH . C 3 HOH A 103 307 307 HOH HOH . C 3 HOH A 104 308 308 HOH HOH . C 3 HOH A 105 309 309 HOH HOH . C 3 HOH A 106 310 310 HOH HOH . C 3 HOH A 107 311 311 HOH HOH . C 3 HOH A 108 312 312 HOH HOH . C 3 HOH A 109 313 313 HOH HOH . C 3 HOH A 110 314 314 HOH HOH . C 3 HOH A 111 315 315 HOH HOH . C 3 HOH A 112 316 316 HOH HOH . C 3 HOH A 113 317 317 HOH HOH . C 3 HOH A 114 318 318 HOH HOH . C 3 HOH A 115 319 319 HOH HOH . C 3 HOH A 116 320 320 HOH HOH . C 3 HOH A 117 321 321 HOH HOH . C 3 HOH A 118 322 322 HOH HOH . C 3 HOH A 119 323 323 HOH HOH . C 3 HOH A 120 324 324 HOH HOH . C 3 HOH A 121 325 325 HOH HOH . C 3 HOH A 122 326 326 HOH HOH . C 3 HOH A 123 327 327 HOH HOH . C 3 HOH A 124 328 328 HOH HOH . C 3 HOH A 125 329 329 HOH HOH . C 3 HOH A 126 331 331 HOH HOH . C 3 HOH A 127 332 332 HOH HOH . C 3 HOH A 128 333 333 HOH HOH . C 3 HOH A 129 334 334 HOH HOH . C 3 HOH A 130 335 335 HOH HOH . C 3 HOH A 131 336 336 HOH HOH . C 3 HOH A 132 337 337 HOH HOH . C 3 HOH A 133 338 338 HOH HOH . C 3 HOH A 134 339 339 HOH HOH . C 3 HOH A 135 340 340 HOH HOH . C 3 HOH A 136 341 341 HOH HOH . C 3 HOH A 137 342 342 HOH HOH . C 3 HOH A 138 343 343 HOH HOH . C 3 HOH A 139 344 344 HOH HOH . C 3 HOH A 140 345 345 HOH HOH . C 3 HOH A 141 346 346 HOH HOH . C 3 HOH A 142 347 347 HOH HOH . C 3 HOH A 143 348 348 HOH HOH . C 3 HOH A 144 349 349 HOH HOH . C 3 HOH A 145 350 350 HOH HOH . C 3 HOH A 146 351 351 HOH HOH . C 3 HOH A 147 352 352 HOH HOH . C 3 HOH A 148 353 353 HOH HOH . C 3 HOH A 149 354 354 HOH HOH . C 3 HOH A 150 355 355 HOH HOH . C 3 HOH A 151 356 356 HOH HOH . C 3 HOH A 152 357 357 HOH HOH . C 3 HOH A 153 358 358 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 64.885 _atom_site.Cartn_y 32.377 _atom_site.Cartn_z 49.832 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 23.82 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 401 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 279 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #