data_1PPY # _model_server_result.job_id O-oHrJlBuECtyrGh0NlO-A _model_server_result.datetime_utc '2024-11-14 17:08:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1ppy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":271}' # _entry.id 1PPY # _exptl.entry_id 1PPY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1PPY _cell.length_a 70.983 _cell.length_b 70.983 _cell.length_c 216.386 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1PPY _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 12_555 x,x-y,-z+1/6 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 0 0 36.064333 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C HIS 77 A HIS 77 1_555 A N CSX 78 A CSX 78 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale2 A C CSX 78 A CSX 78 1_555 A N ALA 79 A ALA 79 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale3 B C HIS 77 B HIS 77 1_555 B N CSX 78 B CSX 78 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale4 B C CSX 78 B CSX 78 1_555 B N ALA 79 B ALA 79 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 304 n n S O2 SO4 doub 305 n n S O3 SO4 sing 306 n n S O4 SO4 sing 307 n n # _atom_sites.entry_id 1PPY _atom_sites.fract_transf_matrix[1][1] 0.014088 _atom_sites.fract_transf_matrix[1][2] 0.008134 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016267 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004621 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 271 271 SO4 SUL . D 3 HOH A 1 272 1 HOH HOH . D 3 HOH A 2 273 2 HOH HOH . D 3 HOH A 3 274 4 HOH HOH . D 3 HOH A 4 275 6 HOH HOH . D 3 HOH A 5 276 7 HOH HOH . D 3 HOH A 6 277 9 HOH HOH . D 3 HOH A 7 278 15 HOH HOH . D 3 HOH A 8 279 16 HOH HOH . D 3 HOH A 9 280 17 HOH HOH . D 3 HOH A 10 281 18 HOH HOH . D 3 HOH A 11 282 19 HOH HOH . D 3 HOH A 12 283 22 HOH HOH . D 3 HOH A 13 284 23 HOH HOH . D 3 HOH A 14 285 26 HOH HOH . D 3 HOH A 15 286 27 HOH HOH . D 3 HOH A 16 287 29 HOH HOH . D 3 HOH A 17 288 30 HOH HOH . D 3 HOH A 18 289 31 HOH HOH . D 3 HOH A 19 290 32 HOH HOH . D 3 HOH A 20 291 33 HOH HOH . D 3 HOH A 21 292 34 HOH HOH . D 3 HOH A 22 293 35 HOH HOH . D 3 HOH A 23 294 37 HOH HOH . D 3 HOH A 24 295 38 HOH HOH . D 3 HOH A 25 296 41 HOH HOH . D 3 HOH A 26 297 42 HOH HOH . D 3 HOH A 27 298 43 HOH HOH . D 3 HOH A 28 299 44 HOH HOH . D 3 HOH A 29 300 45 HOH HOH . D 3 HOH A 30 301 47 HOH HOH . D 3 HOH A 31 302 48 HOH HOH . D 3 HOH A 32 303 49 HOH HOH . D 3 HOH A 33 304 51 HOH HOH . D 3 HOH A 34 305 52 HOH HOH . D 3 HOH A 35 306 53 HOH HOH . D 3 HOH A 36 307 54 HOH HOH . D 3 HOH A 37 308 56 HOH HOH . D 3 HOH A 38 309 57 HOH HOH . D 3 HOH A 39 310 58 HOH HOH . D 3 HOH A 40 311 62 HOH HOH . D 3 HOH A 41 312 63 HOH HOH . D 3 HOH A 42 313 64 HOH HOH . D 3 HOH A 43 314 67 HOH HOH . D 3 HOH A 44 315 69 HOH HOH . D 3 HOH A 45 316 71 HOH HOH . D 3 HOH A 46 317 72 HOH HOH . D 3 HOH A 47 318 73 HOH HOH . D 3 HOH A 48 319 75 HOH HOH . D 3 HOH A 49 320 76 HOH HOH . D 3 HOH A 50 321 77 HOH HOH . D 3 HOH A 51 322 79 HOH HOH . D 3 HOH A 52 323 80 HOH HOH . D 3 HOH A 53 324 81 HOH HOH . D 3 HOH A 54 325 83 HOH HOH . D 3 HOH A 55 326 84 HOH HOH . D 3 HOH A 56 327 87 HOH HOH . D 3 HOH A 57 328 88 HOH HOH . D 3 HOH A 58 329 90 HOH HOH . D 3 HOH A 59 330 91 HOH HOH . D 3 HOH A 60 331 93 HOH HOH . D 3 HOH A 61 332 94 HOH HOH . D 3 HOH A 62 333 95 HOH HOH . D 3 HOH A 63 334 96 HOH HOH . D 3 HOH A 64 335 97 HOH HOH . D 3 HOH A 65 336 98 HOH HOH . D 3 HOH A 66 337 99 HOH HOH . D 3 HOH A 67 338 101 HOH HOH . D 3 HOH A 68 339 103 HOH HOH . D 3 HOH A 69 340 105 HOH HOH . D 3 HOH A 70 341 106 HOH HOH . D 3 HOH A 71 342 107 HOH HOH . D 3 HOH A 72 343 110 HOH HOH . D 3 HOH A 73 344 111 HOH HOH . D 3 HOH A 74 345 112 HOH HOH . D 3 HOH A 75 346 113 HOH HOH . D 3 HOH A 76 347 114 HOH HOH . D 3 HOH A 77 348 119 HOH HOH . D 3 HOH A 78 349 120 HOH HOH . D 3 HOH A 79 350 121 HOH HOH . D 3 HOH A 80 351 122 HOH HOH . D 3 HOH A 81 352 123 HOH HOH . D 3 HOH A 82 353 124 HOH HOH . D 3 HOH A 83 354 125 HOH HOH . D 3 HOH A 84 355 126 HOH HOH . D 3 HOH A 85 356 127 HOH HOH . D 3 HOH A 86 357 128 HOH HOH . D 3 HOH A 87 358 129 HOH HOH . D 3 HOH A 88 359 130 HOH HOH . D 3 HOH A 89 360 131 HOH HOH . D 3 HOH A 90 361 132 HOH HOH . D 3 HOH A 91 362 133 HOH HOH . D 3 HOH A 92 363 134 HOH HOH . D 3 HOH A 93 364 135 HOH HOH . D 3 HOH A 94 365 136 HOH HOH . D 3 HOH A 95 366 137 HOH HOH . D 3 HOH A 96 367 138 HOH HOH . D 3 HOH A 97 368 139 HOH HOH . D 3 HOH A 98 369 140 HOH HOH . D 3 HOH A 99 370 141 HOH HOH . D 3 HOH A 100 371 142 HOH HOH . D 3 HOH A 101 372 143 HOH HOH . D 3 HOH A 102 373 144 HOH HOH . D 3 HOH A 103 374 146 HOH HOH . D 3 HOH A 104 375 147 HOH HOH . D 3 HOH A 105 376 148 HOH HOH . D 3 HOH A 106 377 159 HOH HOH . D 3 HOH A 107 378 171 HOH HOH . D 3 HOH A 108 379 172 HOH HOH . D 3 HOH A 109 380 173 HOH HOH . D 3 HOH A 110 381 174 HOH HOH . D 3 HOH A 111 382 175 HOH HOH . D 3 HOH A 112 383 176 HOH HOH . D 3 HOH A 113 384 177 HOH HOH . D 3 HOH A 114 385 178 HOH HOH . D 3 HOH A 115 386 179 HOH HOH . D 3 HOH A 116 387 182 HOH HOH . D 3 HOH A 117 388 184 HOH HOH . D 3 HOH A 118 389 185 HOH HOH . D 3 HOH A 119 390 186 HOH HOH . D 3 HOH A 120 391 187 HOH HOH . D 3 HOH A 121 392 188 HOH HOH . D 3 HOH A 122 393 189 HOH HOH . D 3 HOH A 123 394 190 HOH HOH . D 3 HOH A 124 395 191 HOH HOH . D 3 HOH A 125 396 192 HOH HOH . D 3 HOH A 126 397 193 HOH HOH . D 3 HOH A 127 398 194 HOH HOH . D 3 HOH A 128 399 195 HOH HOH . D 3 HOH A 129 400 196 HOH HOH . D 3 HOH A 130 401 197 HOH HOH . D 3 HOH A 131 402 198 HOH HOH . D 3 HOH A 132 403 199 HOH HOH . D 3 HOH A 133 404 200 HOH HOH . D 3 HOH A 134 405 201 HOH HOH . D 3 HOH A 135 406 202 HOH HOH . D 3 HOH A 136 407 203 HOH HOH . D 3 HOH A 137 408 204 HOH HOH . D 3 HOH A 138 409 205 HOH HOH . D 3 HOH A 139 410 208 HOH HOH . D 3 HOH A 140 411 212 HOH HOH . D 3 HOH A 141 412 213 HOH HOH . D 3 HOH A 142 413 231 HOH HOH . D 3 HOH A 143 414 232 HOH HOH . D 3 HOH A 144 415 233 HOH HOH . D 3 HOH A 145 416 234 HOH HOH . D 3 HOH A 146 417 235 HOH HOH . D 3 HOH A 147 418 236 HOH HOH . D 3 HOH A 148 419 237 HOH HOH . D 3 HOH A 149 420 238 HOH HOH . D 3 HOH A 150 421 239 HOH HOH . D 3 HOH A 151 422 240 HOH HOH . D 3 HOH A 152 423 241 HOH HOH . D 3 HOH A 153 424 242 HOH HOH . D 3 HOH A 154 425 243 HOH HOH . D 3 HOH A 155 426 248 HOH HOH . D 3 HOH A 156 427 249 HOH HOH . D 3 HOH A 157 428 250 HOH HOH . D 3 HOH A 158 429 251 HOH HOH . D 3 HOH A 159 430 252 HOH HOH . D 3 HOH A 160 431 253 HOH HOH . D 3 HOH A 161 432 256 HOH HOH . D 3 HOH A 162 433 257 HOH HOH . D 3 HOH A 163 434 258 HOH HOH . D 3 HOH A 164 435 259 HOH HOH . D 3 HOH A 165 436 260 HOH HOH . D 3 HOH A 166 437 261 HOH HOH . D 3 HOH A 167 438 262 HOH HOH . D 3 HOH A 168 439 265 HOH HOH . D 3 HOH A 169 440 266 HOH HOH . D 3 HOH A 170 441 267 HOH HOH . D 3 HOH A 171 442 268 HOH HOH . D 3 HOH A 172 443 269 HOH HOH . D 3 HOH A 173 444 270 HOH HOH . E 3 HOH B 1 127 3 HOH HOH . E 3 HOH B 2 128 5 HOH HOH . E 3 HOH B 3 129 8 HOH HOH . E 3 HOH B 4 130 10 HOH HOH . E 3 HOH B 5 131 11 HOH HOH . E 3 HOH B 6 132 12 HOH HOH . E 3 HOH B 7 133 13 HOH HOH . E 3 HOH B 8 134 14 HOH HOH . E 3 HOH B 9 135 20 HOH HOH . E 3 HOH B 10 136 21 HOH HOH . E 3 HOH B 11 137 24 HOH HOH . E 3 HOH B 12 138 25 HOH HOH . E 3 HOH B 13 139 28 HOH HOH . E 3 HOH B 14 140 36 HOH HOH . E 3 HOH B 15 141 39 HOH HOH . E 3 HOH B 16 142 40 HOH HOH . E 3 HOH B 17 143 46 HOH HOH . E 3 HOH B 18 144 50 HOH HOH . E 3 HOH B 19 145 55 HOH HOH . E 3 HOH B 20 146 59 HOH HOH . E 3 HOH B 21 147 60 HOH HOH . E 3 HOH B 22 148 61 HOH HOH . E 3 HOH B 23 149 65 HOH HOH . E 3 HOH B 24 150 66 HOH HOH . E 3 HOH B 25 151 68 HOH HOH . E 3 HOH B 26 152 70 HOH HOH . E 3 HOH B 27 153 74 HOH HOH . E 3 HOH B 28 154 78 HOH HOH . E 3 HOH B 29 155 82 HOH HOH . E 3 HOH B 30 156 85 HOH HOH . E 3 HOH B 31 157 86 HOH HOH . E 3 HOH B 32 158 89 HOH HOH . E 3 HOH B 33 159 92 HOH HOH . E 3 HOH B 34 160 100 HOH HOH . E 3 HOH B 35 161 102 HOH HOH . E 3 HOH B 36 162 104 HOH HOH . E 3 HOH B 37 163 108 HOH HOH . E 3 HOH B 38 164 109 HOH HOH . E 3 HOH B 39 165 115 HOH HOH . E 3 HOH B 40 166 116 HOH HOH . E 3 HOH B 41 167 117 HOH HOH . E 3 HOH B 42 168 118 HOH HOH . E 3 HOH B 43 169 145 HOH HOH . E 3 HOH B 44 170 149 HOH HOH . E 3 HOH B 45 171 150 HOH HOH . E 3 HOH B 46 172 151 HOH HOH . E 3 HOH B 47 173 152 HOH HOH . E 3 HOH B 48 174 153 HOH HOH . E 3 HOH B 49 175 154 HOH HOH . E 3 HOH B 50 176 155 HOH HOH . E 3 HOH B 51 177 156 HOH HOH . E 3 HOH B 52 178 157 HOH HOH . E 3 HOH B 53 179 158 HOH HOH . E 3 HOH B 54 180 160 HOH HOH . E 3 HOH B 55 181 161 HOH HOH . E 3 HOH B 56 182 162 HOH HOH . E 3 HOH B 57 183 163 HOH HOH . E 3 HOH B 58 184 164 HOH HOH . E 3 HOH B 59 185 165 HOH HOH . E 3 HOH B 60 186 166 HOH HOH . E 3 HOH B 61 187 167 HOH HOH . E 3 HOH B 62 188 168 HOH HOH . E 3 HOH B 63 189 169 HOH HOH . E 3 HOH B 64 190 170 HOH HOH . E 3 HOH B 65 191 180 HOH HOH . E 3 HOH B 66 192 181 HOH HOH . E 3 HOH B 67 193 183 HOH HOH . E 3 HOH B 68 194 206 HOH HOH . E 3 HOH B 69 195 207 HOH HOH . E 3 HOH B 70 196 209 HOH HOH . E 3 HOH B 71 197 210 HOH HOH . E 3 HOH B 72 198 211 HOH HOH . E 3 HOH B 73 199 214 HOH HOH . E 3 HOH B 74 200 215 HOH HOH . E 3 HOH B 75 201 216 HOH HOH . E 3 HOH B 76 202 217 HOH HOH . E 3 HOH B 77 203 218 HOH HOH . E 3 HOH B 78 204 219 HOH HOH . E 3 HOH B 79 205 220 HOH HOH . E 3 HOH B 80 206 221 HOH HOH . E 3 HOH B 81 207 222 HOH HOH . E 3 HOH B 82 208 223 HOH HOH . E 3 HOH B 83 209 224 HOH HOH . E 3 HOH B 84 210 225 HOH HOH . E 3 HOH B 85 211 226 HOH HOH . E 3 HOH B 86 212 227 HOH HOH . E 3 HOH B 87 213 228 HOH HOH . E 3 HOH B 88 214 229 HOH HOH . E 3 HOH B 89 215 230 HOH HOH . E 3 HOH B 90 216 244 HOH HOH . E 3 HOH B 91 217 245 HOH HOH . E 3 HOH B 92 218 246 HOH HOH . E 3 HOH B 93 219 247 HOH HOH . E 3 HOH B 94 220 254 HOH HOH . E 3 HOH B 95 221 255 HOH HOH . E 3 HOH B 96 222 263 HOH HOH . E 3 HOH B 97 223 264 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . C 2 69.979 34.84 39.891 0.8 47.35 ? S SO4 271 A 1 HETATM 2 O O1 SO4 . . . C 2 71.284 35.569 39.991 0.8 47.16 ? O1 SO4 271 A 1 HETATM 3 O O2 SO4 . . . C 2 70.016 33.716 38.959 0.8 47.71 ? O2 SO4 271 A 1 HETATM 4 O O3 SO4 . . . C 2 69.701 34.235 41.241 0.8 46.06 ? O3 SO4 271 A 1 HETATM 5 O O4 SO4 . . . C 2 68.945 35.877 39.65 0.8 46.49 ? O4 SO4 271 A 1 # _model_server_stats.io_time_ms 47 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 287 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #