data_1PQ2 # _model_server_result.job_id wdnLm1ZXwq6CQlgCIdjMjw _model_server_result.datetime_utc '2024-11-29 04:24:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1pq2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":501}' # _entry.id 1PQ2 # _exptl.entry_id 1PQ2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 256.424 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PALMITIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 112.51 _cell.angle_gamma 90 _cell.entry_id 1PQ2 _cell.length_a 105.988 _cell.length_b 137.405 _cell.length_c 97.322 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1PQ2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,H 1 1 B,F,G,I 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 417 A CYS 435 1_555 D FE HEM . A HEM 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.225 ? metalc ? metalc2 B SG CYS 417 B CYS 435 1_555 G FE HEM . B HEM 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.195 ? # _chem_comp.formula 'C16 H32 O2' _chem_comp.formula_weight 256.424 _chem_comp.id PLM _chem_comp.mon_nstd_flag . _chem_comp.name 'PALMITIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PLM sing 342 n n C1 O2 PLM doub 343 n n C1 C2 PLM sing 344 n n O1 H PLM sing 345 n n C2 C3 PLM sing 346 n n C2 H21 PLM sing 347 n n C2 H22 PLM sing 348 n n C3 C4 PLM sing 349 n n C3 H31 PLM sing 350 n n C3 H32 PLM sing 351 n n C4 C5 PLM sing 352 n n C4 H41 PLM sing 353 n n C4 H42 PLM sing 354 n n C5 C6 PLM sing 355 n n C5 H51 PLM sing 356 n n C5 H52 PLM sing 357 n n C6 C7 PLM sing 358 n n C6 H61 PLM sing 359 n n C6 H62 PLM sing 360 n n C7 C8 PLM sing 361 n n C7 H71 PLM sing 362 n n C7 H72 PLM sing 363 n n C8 C9 PLM sing 364 n n C8 H81 PLM sing 365 n n C8 H82 PLM sing 366 n n C9 CA PLM sing 367 n n C9 H91 PLM sing 368 n n C9 H92 PLM sing 369 n n CA CB PLM sing 370 n n CA HA1 PLM sing 371 n n CA HA2 PLM sing 372 n n CB CC PLM sing 373 n n CB HB1 PLM sing 374 n n CB HB2 PLM sing 375 n n CC CD PLM sing 376 n n CC HC1 PLM sing 377 n n CC HC2 PLM sing 378 n n CD CE PLM sing 379 n n CD HD1 PLM sing 380 n n CD HD2 PLM sing 381 n n CE CF PLM sing 382 n n CE HE1 PLM sing 383 n n CE HE2 PLM sing 384 n n CF CG PLM sing 385 n n CF HF1 PLM sing 386 n n CF HF2 PLM sing 387 n n CG HG1 PLM sing 388 n n CG HG2 PLM sing 389 n n CG HG3 PLM sing 390 n n # _atom_sites.entry_id 1PQ2 _atom_sites.fract_transf_matrix[1][1] 0.009435 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00391 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007278 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011123 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PO4 A 1 504 504 PO4 PO4 . D 3 HEM A 1 500 500 HEM HEM . E 4 PLM A 1 502 502 PLM PLM . F 4 PLM B 1 501 501 PLM PLM . G 3 HEM B 1 500 500 HEM HEM . H 5 HOH A 1 600 600 HOH HOH . H 5 HOH A 2 602 602 HOH HOH . H 5 HOH A 3 605 605 HOH HOH . H 5 HOH A 4 607 607 HOH HOH . H 5 HOH A 5 608 608 HOH HOH . H 5 HOH A 6 609 609 HOH HOH . H 5 HOH A 7 610 610 HOH HOH . H 5 HOH A 8 611 611 HOH HOH . H 5 HOH A 9 613 613 HOH HOH . H 5 HOH A 10 614 614 HOH HOH . H 5 HOH A 11 616 616 HOH HOH . H 5 HOH A 12 618 618 HOH HOH . H 5 HOH A 13 619 619 HOH HOH . H 5 HOH A 14 620 620 HOH HOH . H 5 HOH A 15 623 623 HOH HOH . H 5 HOH A 16 624 624 HOH HOH . H 5 HOH A 17 626 626 HOH HOH . H 5 HOH A 18 628 628 HOH HOH . H 5 HOH A 19 629 629 HOH HOH . H 5 HOH A 20 631 631 HOH HOH . H 5 HOH A 21 634 634 HOH HOH . H 5 HOH A 22 635 635 HOH HOH . I 5 HOH B 1 601 601 HOH HOH . I 5 HOH B 2 603 603 HOH HOH . I 5 HOH B 3 604 604 HOH HOH . I 5 HOH B 4 606 606 HOH HOH . I 5 HOH B 5 612 612 HOH HOH . I 5 HOH B 6 615 615 HOH HOH . I 5 HOH B 7 638 638 HOH HOH . I 5 HOH B 8 640 640 HOH HOH . I 5 HOH B 9 641 641 HOH HOH . I 5 HOH B 10 643 643 HOH HOH . I 5 HOH B 11 644 644 HOH HOH . I 5 HOH B 12 647 647 HOH HOH . I 5 HOH B 13 649 649 HOH HOH . I 5 HOH B 14 651 651 HOH HOH . I 5 HOH B 15 653 653 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PLM . . . F 4 -10.44 0.317 -19.238 1 62.05 ? C1 PLM 501 B 1 HETATM 2 O O1 PLM . . . F 4 -10.497 -0.875 -18.837 1 64.47 ? O1 PLM 501 B 1 HETATM 3 O O2 PLM . . . F 4 -9.636 0.708 -20.12 1 62.95 ? O2 PLM 501 B 1 HETATM 4 C C2 PLM . . . F 4 -11.389 1.317 -18.61 1 60.87 ? C2 PLM 501 B 1 HETATM 5 C C3 PLM . . . F 4 -11.948 0.799 -17.308 1 59.73 ? C3 PLM 501 B 1 HETATM 6 C C4 PLM . . . F 4 -12.896 1.796 -16.684 1 59.17 ? C4 PLM 501 B 1 HETATM 7 C C5 PLM . . . F 4 -13.434 1.249 -15.373 1 59.99 ? C5 PLM 501 B 1 HETATM 8 C C6 PLM . . . F 4 -14.465 2.164 -14.797 1 60.42 ? C6 PLM 501 B 1 HETATM 9 C C7 PLM . . . F 4 -15.264 1.438 -13.739 1 61.05 ? C7 PLM 501 B 1 HETATM 10 C C8 PLM . . . F 4 -16.324 2.348 -13.164 1 59.79 ? C8 PLM 501 B 1 HETATM 11 C C9 PLM . . . F 4 -17.122 1.622 -12.12 1 57.91 ? C9 PLM 501 B 1 HETATM 12 C CA PLM . . . F 4 -18.191 2.509 -11.566 1 57.9 ? CA PLM 501 B 1 HETATM 13 C CB PLM . . . F 4 -19.541 1.91 -11.883 1 58.63 ? CB PLM 501 B 1 HETATM 14 C CC PLM . . . F 4 -20.675 2.749 -11.325 1 57.03 ? CC PLM 501 B 1 HETATM 15 C CD PLM . . . F 4 -21.993 2.088 -11.658 1 57.04 ? CD PLM 501 B 1 HETATM 16 C CE PLM . . . F 4 -23.186 2.87 -11.128 1 56.9 ? CE PLM 501 B 1 HETATM 17 C CF PLM . . . F 4 -24.483 2.206 -11.55 1 58.41 ? CF PLM 501 B 1 HETATM 18 C CG PLM . . . F 4 -25.706 2.967 -11.042 1 61.8 ? CG PLM 501 B 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 27 _model_server_stats.query_time_ms 382 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 18 #