data_1PQJ # _model_server_result.job_id Wyx54tnF9RiUFkFtR-kFaQ _model_server_result.datetime_utc '2025-03-04 09:25:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1pqj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":966}' # _entry.id 1PQJ # _exptl.entry_id 1PQJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 154.251 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-HYDROXYETHYL DISULFIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1PQJ _cell.length_a 59.52 _cell.length_b 59.52 _cell.length_c 95.52 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1PQJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE2 GLU 11 A GLU 11 1_555 B K K . A K 972 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.985 ? metalc ? metalc2 A O GLU 11 A GLU 11 1_555 B K K . A K 972 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.961 ? metalc ? metalc3 A OH TYR 18 A TYR 18 1_555 B K K . A K 972 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.97 ? metalc ? metalc4 F O HOH . A HOH 204 1_555 B K K . A K 972 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.966 ? metalc ? metalc5 F O HOH . A HOH 207 1_555 B K K . A K 972 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.99 ? metalc ? metalc6 F O HOH . A HOH 304 1_555 B K K . A K 972 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.99 ? # _chem_comp.formula 'C4 H10 O2 S2' _chem_comp.formula_weight 154.251 _chem_comp.id HED _chem_comp.mon_nstd_flag . _chem_comp.name '2-HYDROXYETHYL DISULFIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 HED sing 129 n n C1 C2 HED sing 130 n n C1 H11 HED sing 131 n n C1 H12 HED sing 132 n n O1 HO1 HED sing 133 n n C2 S3 HED sing 134 n n C2 H21 HED sing 135 n n C2 H22 HED sing 136 n n S3 S4 HED sing 137 n n S4 C5 HED sing 138 n n C5 C6 HED sing 139 n n C5 H51 HED sing 140 n n C5 H52 HED sing 141 n n C6 O6 HED sing 142 n n C6 H61 HED sing 143 n n C6 H62 HED sing 144 n n O6 HO6 HED sing 145 n n # _atom_sites.entry_id 1PQJ _atom_sites.fract_transf_matrix[1][1] 0.016801 _atom_sites.fract_transf_matrix[1][2] 0.0097 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.0194 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010469 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 K A 1 972 972 K K . C 3 CL A 1 973 973 CL CL . D 3 CL A 1 978 978 CL CL . E 4 HED A 1 966 966 HED HED . F 5 HOH A 1 171 171 HOH HOH . F 5 HOH A 2 172 172 HOH HOH . F 5 HOH A 3 174 174 HOH HOH . F 5 HOH A 4 175 175 HOH HOH . F 5 HOH A 5 177 177 HOH HOH . F 5 HOH A 6 179 179 HOH HOH . F 5 HOH A 7 180 180 HOH HOH . F 5 HOH A 8 181 181 HOH HOH . F 5 HOH A 9 182 182 HOH HOH . F 5 HOH A 10 183 183 HOH HOH . F 5 HOH A 11 184 184 HOH HOH . F 5 HOH A 12 185 185 HOH HOH . F 5 HOH A 13 186 186 HOH HOH . F 5 HOH A 14 187 187 HOH HOH . F 5 HOH A 15 188 188 HOH HOH . F 5 HOH A 16 189 189 HOH HOH . F 5 HOH A 17 190 190 HOH HOH . F 5 HOH A 18 191 191 HOH HOH . F 5 HOH A 19 192 192 HOH HOH . F 5 HOH A 20 193 193 HOH HOH . F 5 HOH A 21 194 194 HOH HOH . F 5 HOH A 22 195 195 HOH HOH . F 5 HOH A 23 196 196 HOH HOH . F 5 HOH A 24 197 197 HOH HOH . F 5 HOH A 25 200 200 HOH HOH . F 5 HOH A 26 202 202 HOH HOH . F 5 HOH A 27 204 204 HOH HOH . F 5 HOH A 28 207 207 HOH HOH . F 5 HOH A 29 208 208 HOH HOH . F 5 HOH A 30 209 209 HOH HOH . F 5 HOH A 31 211 211 HOH HOH . F 5 HOH A 32 213 213 HOH HOH . F 5 HOH A 33 215 215 HOH HOH . F 5 HOH A 34 216 216 HOH HOH . F 5 HOH A 35 217 217 HOH HOH . F 5 HOH A 36 218 218 HOH HOH . F 5 HOH A 37 219 219 HOH HOH . F 5 HOH A 38 220 220 HOH HOH . F 5 HOH A 39 221 221 HOH HOH . F 5 HOH A 40 222 222 HOH HOH . F 5 HOH A 41 223 223 HOH HOH . F 5 HOH A 42 224 224 HOH HOH . F 5 HOH A 43 225 225 HOH HOH . F 5 HOH A 44 226 226 HOH HOH . F 5 HOH A 45 227 227 HOH HOH . F 5 HOH A 46 228 228 HOH HOH . F 5 HOH A 47 230 230 HOH HOH . F 5 HOH A 48 231 231 HOH HOH . F 5 HOH A 49 233 233 HOH HOH . F 5 HOH A 50 234 234 HOH HOH . F 5 HOH A 51 236 236 HOH HOH . F 5 HOH A 52 237 237 HOH HOH . F 5 HOH A 53 238 238 HOH HOH . F 5 HOH A 54 239 239 HOH HOH . F 5 HOH A 55 240 240 HOH HOH . F 5 HOH A 56 244 244 HOH HOH . F 5 HOH A 57 246 246 HOH HOH . F 5 HOH A 58 247 247 HOH HOH . F 5 HOH A 59 248 248 HOH HOH . F 5 HOH A 60 249 249 HOH HOH . F 5 HOH A 61 250 250 HOH HOH . F 5 HOH A 62 251 251 HOH HOH . F 5 HOH A 63 253 253 HOH HOH . F 5 HOH A 64 256 256 HOH HOH . F 5 HOH A 65 257 257 HOH HOH . F 5 HOH A 66 259 259 HOH HOH . F 5 HOH A 67 260 260 HOH HOH . F 5 HOH A 68 261 261 HOH HOH . F 5 HOH A 69 266 266 HOH HOH . F 5 HOH A 70 269 269 HOH HOH . F 5 HOH A 71 270 270 HOH HOH . F 5 HOH A 72 272 272 HOH HOH . F 5 HOH A 73 273 273 HOH HOH . F 5 HOH A 74 274 274 HOH HOH . F 5 HOH A 75 276 276 HOH HOH . F 5 HOH A 76 281 281 HOH HOH . F 5 HOH A 77 283 283 HOH HOH . F 5 HOH A 78 284 284 HOH HOH . F 5 HOH A 79 285 285 HOH HOH . F 5 HOH A 80 286 286 HOH HOH . F 5 HOH A 81 288 288 HOH HOH . F 5 HOH A 82 292 292 HOH HOH . F 5 HOH A 83 295 295 HOH HOH . F 5 HOH A 84 296 296 HOH HOH . F 5 HOH A 85 297 297 HOH HOH . F 5 HOH A 86 304 304 HOH HOH . F 5 HOH A 87 308 308 HOH HOH . F 5 HOH A 88 311 311 HOH HOH . F 5 HOH A 89 312 312 HOH HOH . F 5 HOH A 90 313 313 HOH HOH . F 5 HOH A 91 314 314 HOH HOH . F 5 HOH A 92 315 315 HOH HOH . F 5 HOH A 93 317 317 HOH HOH . F 5 HOH A 94 319 319 HOH HOH . F 5 HOH A 95 320 320 HOH HOH . F 5 HOH A 96 402 402 HOH HOH . F 5 HOH A 97 403 403 HOH HOH . F 5 HOH A 98 406 406 HOH HOH . F 5 HOH A 99 409 409 HOH HOH . F 5 HOH A 100 411 411 HOH HOH . F 5 HOH A 101 414 414 HOH HOH . F 5 HOH A 102 415 415 HOH HOH . F 5 HOH A 103 419 419 HOH HOH . F 5 HOH A 104 420 420 HOH HOH . F 5 HOH A 105 423 423 HOH HOH . F 5 HOH A 106 425 425 HOH HOH . F 5 HOH A 107 427 427 HOH HOH . F 5 HOH A 108 428 428 HOH HOH . F 5 HOH A 109 429 429 HOH HOH . F 5 HOH A 110 430 430 HOH HOH . F 5 HOH A 111 432 432 HOH HOH . F 5 HOH A 112 433 433 HOH HOH . F 5 HOH A 113 435 435 HOH HOH . F 5 HOH A 114 436 436 HOH HOH . F 5 HOH A 115 440 440 HOH HOH . F 5 HOH A 116 442 442 HOH HOH . F 5 HOH A 117 445 445 HOH HOH . F 5 HOH A 118 448 448 HOH HOH . F 5 HOH A 119 454 454 HOH HOH . F 5 HOH A 120 456 456 HOH HOH . F 5 HOH A 121 458 458 HOH HOH . F 5 HOH A 122 461 461 HOH HOH . F 5 HOH A 123 462 462 HOH HOH . F 5 HOH A 124 463 463 HOH HOH . F 5 HOH A 125 466 466 HOH HOH . F 5 HOH A 126 467 467 HOH HOH . F 5 HOH A 127 468 468 HOH HOH . F 5 HOH A 128 474 474 HOH HOH . F 5 HOH A 129 475 475 HOH HOH . F 5 HOH A 130 482 482 HOH HOH . F 5 HOH A 131 493 493 HOH HOH . F 5 HOH A 132 494 494 HOH HOH . F 5 HOH A 133 495 495 HOH HOH . F 5 HOH A 134 499 499 HOH HOH . F 5 HOH A 135 500 500 HOH HOH . F 5 HOH A 136 501 501 HOH HOH . F 5 HOH A 137 502 502 HOH HOH . F 5 HOH A 138 504 504 HOH HOH . F 5 HOH A 139 505 505 HOH HOH . F 5 HOH A 140 506 506 HOH HOH . F 5 HOH A 141 508 508 HOH HOH . F 5 HOH A 142 509 509 HOH HOH . F 5 HOH A 143 510 510 HOH HOH . F 5 HOH A 144 511 511 HOH HOH . F 5 HOH A 145 512 512 HOH HOH . F 5 HOH A 146 514 514 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 HED . . . E 4 32.974 1.628 22.255 0.5 10.8 ? C1 HED 966 A 1 HETATM 2 O O1 HED . . . E 4 32.215 2.295 23.23 0.5 100 ? O1 HED 966 A 1 HETATM 3 C C2 HED . . . E 4 32.072 0.532 21.692 0.5 26.6 ? C2 HED 966 A 1 HETATM 4 S S3 HED . . . E 4 32.933 -0.499 20.505 0.5 35.77 ? S3 HED 966 A 1 HETATM 5 S S4 HED . . . E 4 33.146 0.811 18.914 0.5 41.55 ? S4 HED 966 A 1 HETATM 6 C C5 HED . . . E 4 31.441 1.095 18.381 0.5 33.21 ? C5 HED 966 A 1 HETATM 7 C C6 HED . . . E 4 31.34 1.793 17.028 0.5 17 ? C6 HED 966 A 1 HETATM 8 O O6 HED . . . E 4 32.337 1.281 16.157 0.5 45.59 ? O6 HED 966 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 8 #