data_1PQO # _model_server_result.job_id SGbs9xbDhiWNMK5c4xa0fw _model_server_result.datetime_utc '2024-11-27 19:19:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1pqo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":966}' # _entry.id 1PQO # _exptl.entry_id 1PQO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 154.251 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-HYDROXYETHYL DISULFIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1PQO _cell.length_a 60.181 _cell.length_b 60.181 _cell.length_c 95.862 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1PQO _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE2 GLU 11 A GLU 11 1_555 B K K . A K 972 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.165 ? metalc ? metalc2 A O GLU 11 A GLU 11 1_555 B K K . A K 972 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.975 ? metalc ? metalc3 A OH TYR 18 A TYR 18 1_555 B K K . A K 972 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.981 ? metalc ? metalc4 F O HOH . A HOH 270 1_555 B K K . A K 972 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.964 ? metalc ? metalc5 F O HOH . A HOH 358 1_555 B K K . A K 972 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.979 ? # _chem_comp.formula 'C4 H10 O2 S2' _chem_comp.formula_weight 154.251 _chem_comp.id HED _chem_comp.mon_nstd_flag . _chem_comp.name '2-HYDROXYETHYL DISULFIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 HED sing 129 n n C1 C2 HED sing 130 n n C1 H11 HED sing 131 n n C1 H12 HED sing 132 n n O1 HO1 HED sing 133 n n C2 S3 HED sing 134 n n C2 H21 HED sing 135 n n C2 H22 HED sing 136 n n S3 S4 HED sing 137 n n S4 C5 HED sing 138 n n C5 C6 HED sing 139 n n C5 H51 HED sing 140 n n C5 H52 HED sing 141 n n C6 O6 HED sing 142 n n C6 H61 HED sing 143 n n C6 H62 HED sing 144 n n O6 HO6 HED sing 145 n n # _atom_sites.entry_id 1PQO _atom_sites.fract_transf_matrix[1][1] 0.016617 _atom_sites.fract_transf_matrix[1][2] 0.009594 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019187 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010432 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 K A 1 972 972 K K . C 3 CL A 1 973 973 CL CL . D 3 CL A 1 978 978 CL CL . E 4 HED A 1 966 966 HED HED . F 5 HOH A 1 200 200 HOH HOH . F 5 HOH A 2 203 203 HOH HOH . F 5 HOH A 3 204 204 HOH HOH . F 5 HOH A 4 206 206 HOH HOH . F 5 HOH A 5 209 209 HOH HOH . F 5 HOH A 6 210 210 HOH HOH . F 5 HOH A 7 211 211 HOH HOH . F 5 HOH A 8 212 212 HOH HOH . F 5 HOH A 9 213 213 HOH HOH . F 5 HOH A 10 214 214 HOH HOH . F 5 HOH A 11 215 215 HOH HOH . F 5 HOH A 12 216 216 HOH HOH . F 5 HOH A 13 219 219 HOH HOH . F 5 HOH A 14 222 222 HOH HOH . F 5 HOH A 15 227 227 HOH HOH . F 5 HOH A 16 228 228 HOH HOH . F 5 HOH A 17 231 231 HOH HOH . F 5 HOH A 18 232 232 HOH HOH . F 5 HOH A 19 234 234 HOH HOH . F 5 HOH A 20 235 235 HOH HOH . F 5 HOH A 21 240 240 HOH HOH . F 5 HOH A 22 244 244 HOH HOH . F 5 HOH A 23 266 266 HOH HOH . F 5 HOH A 24 269 269 HOH HOH . F 5 HOH A 25 270 270 HOH HOH . F 5 HOH A 26 271 271 HOH HOH . F 5 HOH A 27 272 272 HOH HOH . F 5 HOH A 28 273 273 HOH HOH . F 5 HOH A 29 275 275 HOH HOH . F 5 HOH A 30 276 276 HOH HOH . F 5 HOH A 31 278 278 HOH HOH . F 5 HOH A 32 279 279 HOH HOH . F 5 HOH A 33 280 280 HOH HOH . F 5 HOH A 34 281 281 HOH HOH . F 5 HOH A 35 282 282 HOH HOH . F 5 HOH A 36 283 283 HOH HOH . F 5 HOH A 37 284 284 HOH HOH . F 5 HOH A 38 285 285 HOH HOH . F 5 HOH A 39 286 286 HOH HOH . F 5 HOH A 40 287 287 HOH HOH . F 5 HOH A 41 288 288 HOH HOH . F 5 HOH A 42 289 289 HOH HOH . F 5 HOH A 43 290 290 HOH HOH . F 5 HOH A 44 291 291 HOH HOH . F 5 HOH A 45 292 292 HOH HOH . F 5 HOH A 46 293 293 HOH HOH . F 5 HOH A 47 294 294 HOH HOH . F 5 HOH A 48 297 297 HOH HOH . F 5 HOH A 49 298 298 HOH HOH . F 5 HOH A 50 299 299 HOH HOH . F 5 HOH A 51 301 301 HOH HOH . F 5 HOH A 52 302 302 HOH HOH . F 5 HOH A 53 303 303 HOH HOH . F 5 HOH A 54 304 304 HOH HOH . F 5 HOH A 55 305 305 HOH HOH . F 5 HOH A 56 309 309 HOH HOH . F 5 HOH A 57 310 310 HOH HOH . F 5 HOH A 58 312 312 HOH HOH . F 5 HOH A 59 313 313 HOH HOH . F 5 HOH A 60 314 314 HOH HOH . F 5 HOH A 61 315 315 HOH HOH . F 5 HOH A 62 316 316 HOH HOH . F 5 HOH A 63 317 317 HOH HOH . F 5 HOH A 64 318 318 HOH HOH . F 5 HOH A 65 319 319 HOH HOH . F 5 HOH A 66 320 320 HOH HOH . F 5 HOH A 67 321 321 HOH HOH . F 5 HOH A 68 322 322 HOH HOH . F 5 HOH A 69 323 323 HOH HOH . F 5 HOH A 70 324 324 HOH HOH . F 5 HOH A 71 327 327 HOH HOH . F 5 HOH A 72 329 329 HOH HOH . F 5 HOH A 73 330 330 HOH HOH . F 5 HOH A 74 333 333 HOH HOH . F 5 HOH A 75 334 334 HOH HOH . F 5 HOH A 76 336 336 HOH HOH . F 5 HOH A 77 337 337 HOH HOH . F 5 HOH A 78 339 339 HOH HOH . F 5 HOH A 79 340 340 HOH HOH . F 5 HOH A 80 341 341 HOH HOH . F 5 HOH A 81 342 342 HOH HOH . F 5 HOH A 82 343 343 HOH HOH . F 5 HOH A 83 345 345 HOH HOH . F 5 HOH A 84 346 346 HOH HOH . F 5 HOH A 85 350 350 HOH HOH . F 5 HOH A 86 352 352 HOH HOH . F 5 HOH A 87 356 356 HOH HOH . F 5 HOH A 88 357 357 HOH HOH . F 5 HOH A 89 358 358 HOH HOH . F 5 HOH A 90 359 359 HOH HOH . F 5 HOH A 91 360 360 HOH HOH . F 5 HOH A 92 363 363 HOH HOH . F 5 HOH A 93 364 364 HOH HOH . F 5 HOH A 94 365 365 HOH HOH . F 5 HOH A 95 370 370 HOH HOH . F 5 HOH A 96 374 374 HOH HOH . F 5 HOH A 97 376 376 HOH HOH . F 5 HOH A 98 378 378 HOH HOH . F 5 HOH A 99 380 380 HOH HOH . F 5 HOH A 100 384 384 HOH HOH . F 5 HOH A 101 386 386 HOH HOH . F 5 HOH A 102 387 387 HOH HOH . F 5 HOH A 103 390 390 HOH HOH . F 5 HOH A 104 392 392 HOH HOH . F 5 HOH A 105 395 395 HOH HOH . F 5 HOH A 106 396 396 HOH HOH . F 5 HOH A 107 398 398 HOH HOH . F 5 HOH A 108 399 399 HOH HOH . F 5 HOH A 109 400 400 HOH HOH . F 5 HOH A 110 401 401 HOH HOH . F 5 HOH A 111 403 403 HOH HOH . F 5 HOH A 112 405 405 HOH HOH . F 5 HOH A 113 406 406 HOH HOH . F 5 HOH A 114 409 409 HOH HOH . F 5 HOH A 115 416 416 HOH HOH . F 5 HOH A 116 419 419 HOH HOH . F 5 HOH A 117 432 432 HOH HOH . F 5 HOH A 118 455 455 HOH HOH . F 5 HOH A 119 472 472 HOH HOH . F 5 HOH A 120 486 486 HOH HOH . F 5 HOH A 121 497 497 HOH HOH . F 5 HOH A 122 524 524 HOH HOH . F 5 HOH A 123 532 532 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 HED . . . E 4 31.544 0.841 21.583 0.5 27.04 ? C1 HED 966 A 1 HETATM 2 O O1 HED . . . E 4 32.866 1.278 21.864 0.5 28.33 ? O1 HED 966 A 1 HETATM 3 C C2 HED . . . E 4 31.455 0.395 20.116 0.5 56.46 ? C2 HED 966 A 1 HETATM 4 S S3 HED . . . E 4 32.899 0.929 19.169 0.5 35.44 ? S3 HED 966 A 1 HETATM 5 S S4 HED . . . E 4 32.128 2.248 17.881 0.5 69.01 ? S4 HED 966 A 1 HETATM 6 C C5 HED . . . E 4 30.889 1.321 16.962 0.5 17.34 ? C5 HED 966 A 1 HETATM 7 C C6 HED . . . E 4 31.517 0.503 15.817 0.5 98.58 ? C6 HED 966 A 1 HETATM 8 O O6 HED . . . E 4 32.9 0.799 15.709 0.5 32.66 ? O6 HED 966 A 1 # _model_server_stats.io_time_ms 5 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 236 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 8 #