data_1PRO # _model_server_result.job_id ueloq95KTFKRkarjpJAAZw _model_server_result.datetime_utc '2025-02-26 21:59:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1pro # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 1PRO # _exptl.entry_id 1PRO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 583.674 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (5R,6R)-2,4-BIS-(4-HYDROXY-3-METHOXYBENZYL)-1,5-DIBENZYL-3-OXO-6-HYDROXY-1,2,4-TRIAZACYCLOHEPTANE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1PRO _cell.length_a 63.08 _cell.length_b 63.08 _cell.length_c 83.68 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1PRO _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 61' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C34 H37 N3 O6' _chem_comp.formula_weight 583.674 _chem_comp.id A88 _chem_comp.mon_nstd_flag . _chem_comp.name (5R,6R)-2,4-BIS-(4-HYDROXY-3-METHOXYBENZYL)-1,5-DIBENZYL-3-OXO-6-HYDROXY-1,2,4-TRIAZACYCLOHEPTANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms A-98881 # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 N2 A88 sing 1 n n N1 C7 A88 sing 2 n n N1 C8 A88 sing 3 n n N2 C3 A88 sing 4 n n N2 C32 A88 sing 5 n n C3 O3 A88 doub 6 n n C3 N4 A88 sing 7 n n N4 C5 A88 sing 8 n n N4 C22 A88 sing 9 n n C5 C6 A88 sing 10 n n C5 C15 A88 sing 11 n n C5 H5 A88 sing 12 n n C6 O6 A88 sing 13 n n C6 C7 A88 sing 14 n n C6 H6 A88 sing 15 n n O6 HO6 A88 sing 16 n n C7 H71 A88 sing 17 n n C7 H72 A88 sing 18 n n C8 C9 A88 sing 19 n n C8 H81 A88 sing 20 n n C8 H82 A88 sing 21 n n C9 C10 A88 doub 22 n y C9 C14 A88 sing 23 n y C10 C11 A88 sing 24 n y C10 H10 A88 sing 25 n n C11 C12 A88 doub 26 n y C11 H11 A88 sing 27 n n C12 C13 A88 sing 28 n y C12 H12 A88 sing 29 n n C13 C14 A88 doub 30 n y C13 H13 A88 sing 31 n n C14 H14 A88 sing 32 n n C15 C16 A88 sing 33 n n C15 H151 A88 sing 34 n n C15 H152 A88 sing 35 n n C16 C17 A88 doub 36 n y C16 C21 A88 sing 37 n y C17 C18 A88 sing 38 n y C17 H17 A88 sing 39 n n C18 C19 A88 doub 40 n y C18 H18 A88 sing 41 n n C19 C20 A88 sing 42 n y C19 H19 A88 sing 43 n n C20 C21 A88 doub 44 n y C20 H20 A88 sing 45 n n C21 H21 A88 sing 46 n n C22 C23 A88 sing 47 n n C22 H221 A88 sing 48 n n C22 H222 A88 sing 49 n n C23 C24 A88 doub 50 n y C23 C28 A88 sing 51 n y C24 C25 A88 sing 52 n y C24 H24 A88 sing 53 n n C25 C26 A88 doub 54 n y C25 O30 A88 sing 55 n n C26 C27 A88 sing 56 n y C26 O29 A88 sing 57 n n C27 C28 A88 doub 58 n y C27 H27 A88 sing 59 n n C28 H28 A88 sing 60 n n O29 HO9 A88 sing 61 n n O30 C31 A88 sing 62 n n C31 H311 A88 sing 63 n n C31 H312 A88 sing 64 n n C31 H313 A88 sing 65 n n C32 C33 A88 sing 66 n n C32 H321 A88 sing 67 n n C32 H322 A88 sing 68 n n C33 C34 A88 doub 69 n y C33 C38 A88 sing 70 n y C34 C35 A88 sing 71 n y C34 H34 A88 sing 72 n n C35 C36 A88 doub 73 n y C35 H35 A88 sing 74 n n C36 C37 A88 sing 75 n y C36 O39 A88 sing 76 n n C37 C38 A88 doub 77 n y C37 O40 A88 sing 78 n n C38 H38 A88 sing 79 n n O39 HO3 A88 sing 80 n n O40 C41 A88 sing 81 n n C41 H411 A88 sing 82 n n C41 H412 A88 sing 83 n n C41 H413 A88 sing 84 n n # _atom_sites.entry_id 1PRO _atom_sites.fract_transf_matrix[1][1] 0.015853 _atom_sites.fract_transf_matrix[1][2] 0.009153 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018305 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01195 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 A88 A 1 301 301 A88 A88 . D 3 HOH A 1 402 402 HOH HOH . D 3 HOH A 2 404 404 HOH HOH . D 3 HOH A 3 406 406 HOH HOH . D 3 HOH A 4 408 408 HOH HOH . D 3 HOH A 5 409 409 HOH HOH . D 3 HOH A 6 411 411 HOH HOH . D 3 HOH A 7 420 420 HOH HOH . D 3 HOH A 8 424 424 HOH HOH . D 3 HOH A 9 426 426 HOH HOH . D 3 HOH A 10 429 429 HOH HOH . D 3 HOH A 11 432 432 HOH HOH . D 3 HOH A 12 434 434 HOH HOH . D 3 HOH A 13 437 437 HOH HOH . D 3 HOH A 14 439 439 HOH HOH . E 3 HOH B 1 401 401 HOH HOH . E 3 HOH B 2 403 403 HOH HOH . E 3 HOH B 3 405 405 HOH HOH . E 3 HOH B 4 407 407 HOH HOH . E 3 HOH B 5 410 410 HOH HOH . E 3 HOH B 6 412 412 HOH HOH . E 3 HOH B 7 413 413 HOH HOH . E 3 HOH B 8 414 414 HOH HOH . E 3 HOH B 9 415 415 HOH HOH . E 3 HOH B 10 416 416 HOH HOH . E 3 HOH B 11 417 417 HOH HOH . E 3 HOH B 12 418 418 HOH HOH . E 3 HOH B 13 419 419 HOH HOH . E 3 HOH B 14 421 421 HOH HOH . E 3 HOH B 15 422 422 HOH HOH . E 3 HOH B 16 423 423 HOH HOH . E 3 HOH B 17 425 425 HOH HOH . E 3 HOH B 18 427 427 HOH HOH . E 3 HOH B 19 428 428 HOH HOH . E 3 HOH B 20 430 430 HOH HOH . E 3 HOH B 21 431 431 HOH HOH . E 3 HOH B 22 433 433 HOH HOH . E 3 HOH B 23 435 435 HOH HOH . E 3 HOH B 24 436 436 HOH HOH . E 3 HOH B 25 438 438 HOH HOH . E 3 HOH B 26 440 440 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 A88 . . . C 2 -8.609 17.479 26.967 1 18.49 ? N1 A88 301 A 1 HETATM 2 N N2 A88 . . . C 2 -8.635 16.034 26.795 1 15.08 ? N2 A88 301 A 1 HETATM 3 C C3 A88 . . . C 2 -8.834 15.139 27.793 1 17.58 ? C3 A88 301 A 1 HETATM 4 O O3 A88 . . . C 2 -8.196 14.058 27.749 1 18.96 ? O3 A88 301 A 1 HETATM 5 N N4 A88 . . . C 2 -9.738 15.5 28.737 1 16.05 ? N4 A88 301 A 1 HETATM 6 C C5 A88 . . . C 2 -10.783 16.411 28.69 1 15.15 ? C5 A88 301 A 1 HETATM 7 C C6 A88 . . . C 2 -10.507 17.943 28.312 1 15.57 ? C6 A88 301 A 1 HETATM 8 O O6 A88 . . . C 2 -11.712 18.578 28.625 1 27.8 ? O6 A88 301 A 1 HETATM 9 C C7 A88 . . . C 2 -9.955 18.217 26.928 1 16.98 ? C7 A88 301 A 1 HETATM 10 C C8 A88 . . . C 2 -7.597 18.011 27.981 1 13.65 ? C8 A88 301 A 1 HETATM 11 C C9 A88 . . . C 2 -6.261 18.014 27.26 1 17.88 ? C9 A88 301 A 1 HETATM 12 C C10 A88 . . . C 2 -5.999 18.999 26.29 1 21.41 ? C10 A88 301 A 1 HETATM 13 C C11 A88 . . . C 2 -4.798 18.968 25.587 1 21.93 ? C11 A88 301 A 1 HETATM 14 C C12 A88 . . . C 2 -3.866 17.965 25.866 1 23.69 ? C12 A88 301 A 1 HETATM 15 C C13 A88 . . . C 2 -4.14 16.995 26.834 1 20.97 ? C13 A88 301 A 1 HETATM 16 C C14 A88 . . . C 2 -5.33 17.01 27.541 1 18.55 ? C14 A88 301 A 1 HETATM 17 C C15 A88 . . . C 2 -11.835 15.724 27.779 1 14.38 ? C15 A88 301 A 1 HETATM 18 C C16 A88 . . . C 2 -12.513 14.511 28.44 1 19.06 ? C16 A88 301 A 1 HETATM 19 C C17 A88 . . . C 2 -13.515 14.689 29.41 1 19.04 ? C17 A88 301 A 1 HETATM 20 C C18 A88 . . . C 2 -14.126 13.57 29.989 1 23.67 ? C18 A88 301 A 1 HETATM 21 C C19 A88 . . . C 2 -13.742 12.283 29.609 1 21.52 ? C19 A88 301 A 1 HETATM 22 C C20 A88 . . . C 2 -12.748 12.118 28.647 1 20.01 ? C20 A88 301 A 1 HETATM 23 C C21 A88 . . . C 2 -12.129 13.22 28.057 1 18.43 ? C21 A88 301 A 1 HETATM 24 C C22 A88 . . . C 2 -9.508 14.689 30.031 1 14.64 ? C22 A88 301 A 1 HETATM 25 C C23 A88 . . . C 2 -9.761 15.313 31.393 1 15.12 ? C23 A88 301 A 1 HETATM 26 C C24 A88 . . . C 2 -10.888 14.957 32.122 1 14.39 ? C24 A88 301 A 1 HETATM 27 C C25 A88 . . . C 2 -11.106 15.55 33.365 1 15.9 ? C25 A88 301 A 1 HETATM 28 C C26 A88 . . . C 2 -10.186 16.464 33.869 1 13.71 ? C26 A88 301 A 1 HETATM 29 C C27 A88 . . . C 2 -9.06 16.83 33.141 1 14.7 ? C27 A88 301 A 1 HETATM 30 C C28 A88 . . . C 2 -8.854 16.253 31.895 1 14.98 ? C28 A88 301 A 1 HETATM 31 O O29 A88 . . . C 2 -10.386 17.027 35.07 1 16 ? O29 A88 301 A 1 HETATM 32 O O30 A88 . . . C 2 -12.33 15.289 33.995 1 23.21 ? O30 A88 301 A 1 HETATM 33 C C31 A88 . . . C 2 -13.219 14.146 33.846 1 27.17 ? C31 A88 301 A 1 HETATM 34 C C32 A88 . . . C 2 -7.903 15.578 25.526 1 12.52 ? C32 A88 301 A 1 HETATM 35 C C33 A88 . . . C 2 -8.325 16.126 24.19 1 13.72 ? C33 A88 301 A 1 HETATM 36 C C34 A88 . . . C 2 -9.601 15.845 23.679 1 16.91 ? C34 A88 301 A 1 HETATM 37 C C35 A88 . . . C 2 -9.964 16.357 22.435 1 15.36 ? C35 A88 301 A 1 HETATM 38 C C36 A88 . . . C 2 -9.05 17.141 21.725 1 17.62 ? C36 A88 301 A 1 HETATM 39 C C37 A88 . . . C 2 -7.79 17.408 22.246 1 16.38 ? C37 A88 301 A 1 HETATM 40 C C38 A88 . . . C 2 -7.423 16.897 23.47 1 13.02 ? C38 A88 301 A 1 HETATM 41 O O39 A88 . . . C 2 -9.642 17.479 20.566 1 19.74 ? O39 A88 301 A 1 HETATM 42 O O40 A88 . . . C 2 -6.977 18.284 21.532 1 27.1 ? O40 A88 301 A 1 HETATM 43 C C41 A88 . . . C 2 -6.275 19.323 22.266 1 30.54 ? C41 A88 301 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 289 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 43 #