data_1PSA # _model_server_result.job_id 1rOFXAT7IuZEHexnl7u_nA _model_server_result.datetime_utc '2024-11-04 22:50:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1psa # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":327}' # _entry.id 1PSA # _exptl.entry_id 1PSA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 541.763 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-(ethoxycarbonyl)-L-leucyl-N-[(1R,2S,3S)-1-(cyclohexylmethyl)-2,3-dihydroxy-5-methylhexyl]-L-leucinamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 100.8 _cell.entry_id 1PSA _cell.length_a 54.1 _cell.length_b 74.4 _cell.length_c 76.5 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1PSA _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 1 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 45 A CYS 45 1_555 A SG CYS 50 A CYS 50 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? disulf ? disulf2 A SG CYS 206 A CYS 206 1_555 A SG CYS 210 A CYS 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.008 ? disulf ? disulf3 A SG CYS 249 A CYS 249 1_555 A SG CYS 282 A CYS 282 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? disulf ? disulf4 B SG CYS 45 B CYS 45 1_555 B SG CYS 50 B CYS 50 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? disulf ? disulf5 B SG CYS 206 B CYS 206 1_555 B SG CYS 210 B CYS 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.009 ? disulf ? disulf6 B SG CYS 249 B CYS 249 1_555 B SG CYS 282 B CYS 282 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? # _chem_comp.formula 'C29 H55 N3 O6' _chem_comp.formula_weight 541.763 _chem_comp.id 0ZL _chem_comp.mon_nstd_flag . _chem_comp.name N-(ethoxycarbonyl)-L-leucyl-N-[(1R,2S,3S)-1-(cyclohexylmethyl)-2,3-dihydroxy-5-methylhexyl]-L-leucinamide _chem_comp.type peptide-like _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C3 C4 0ZL sing 1 n n C3 H31 0ZL sing 2 n n C3 H32 0ZL sing 3 n n C3 H33 0ZL sing 4 n n C4 O2 0ZL sing 5 n n C4 H41 0ZL sing 6 n n C4 H42 0ZL sing 7 n n O2 C1 0ZL sing 8 n n C1 O1 0ZL doub 9 n n C1 N 0ZL sing 10 n n N CA 0ZL sing 11 n n N H 0ZL sing 12 n n CA C 0ZL sing 13 n n CA CB 0ZL sing 14 n n CA HA 0ZL sing 15 n n C O 0ZL doub 16 n n CB CG 0ZL sing 17 n n CB HBC1 0ZL sing 18 n n CB HBC2 0ZL sing 19 n n CG CD1 0ZL sing 20 n n CG CD2 0ZL sing 21 n n CG HG 0ZL sing 22 n n CD1 HD11 0ZL sing 23 n n CD1 HD12 0ZL sing 24 n n CD1 HD13 0ZL sing 25 n n CD2 HD21 0ZL sing 26 n n CD2 HD22 0ZL sing 27 n n CD2 HD23 0ZL sing 28 n n N1 CA1 0ZL sing 29 n n N1 H1 0ZL sing 30 n n CA1 C2 0ZL sing 31 n n CA1 CB1 0ZL sing 32 n n CA1 HA1 0ZL sing 33 n n C2 O3 0ZL doub 34 n n CB1 CG1 0ZL sing 35 n n CB1 HB2 0ZL sing 36 n n CB1 HB3 0ZL sing 37 n n CG1 CD11 0ZL sing 38 n n CG1 CD21 0ZL sing 39 n n CG1 HG1 0ZL sing 40 n n CD11 HD14 0ZL sing 41 n n CD11 HD15 0ZL sing 42 n n CD11 HD16 0ZL sing 43 n n CD21 HD24 0ZL sing 44 n n CD21 HD25 0ZL sing 45 n n CD21 HD26 0ZL sing 46 n n C11 N2 0ZL sing 47 n n C11 C21 0ZL sing 48 n n C11 C7' 0ZL sing 49 n n C11 H11 0ZL sing 50 n n N2 HN2 0ZL sing 51 n n C21 O21 0ZL sing 52 n n C21 C31 0ZL sing 53 n n C21 H2 0ZL sing 54 n n O21 HO2 0ZL sing 55 n n C31 O31 0ZL sing 56 n n C31 C41 0ZL sing 57 n n C31 H3 0ZL sing 58 n n O31 HO3 0ZL sing 59 n n C41 C5 0ZL sing 60 n n C41 H411 0ZL sing 61 n n C41 H421 0ZL sing 62 n n C5 C6 0ZL sing 63 n n C5 C7 0ZL sing 64 n n C5 H5 0ZL sing 65 n n C6 H61 0ZL sing 66 n n C6 H62 0ZL sing 67 n n C6 H63 0ZL sing 68 n n C7 H71 0ZL sing 69 n n C7 H72 0ZL sing 70 n n C7 H73 0ZL sing 71 n n C7' C1' 0ZL sing 72 n n C7' "H7'1" 0ZL sing 73 n n C7' "H7'2" 0ZL sing 74 n n C1' C2' 0ZL sing 75 n n C1' C6' 0ZL sing 76 n n C1' H1' 0ZL sing 77 n n C2' C3' 0ZL sing 78 n n C2' "H2'1" 0ZL sing 79 n n C2' "H2'2" 0ZL sing 80 n n C6' C5' 0ZL sing 81 n n C6' "H6'1" 0ZL sing 82 n n C6' "H6'2" 0ZL sing 83 n n C3' C4' 0ZL sing 84 n n C3' "H3'1" 0ZL sing 85 n n C3' "H3'2" 0ZL sing 86 n n C5' C4' 0ZL sing 87 n n C5' "H5'1" 0ZL sing 88 n n C5' "H5'2" 0ZL sing 89 n n C4' "H4'1" 0ZL sing 90 n n C4' "H4'2" 0ZL sing 91 n n C N1 0ZL sing 92 n n C2 N2 0ZL sing 93 n n # _atom_sites.entry_id 1PSA _atom_sites.fract_transf_matrix[1][1] 0.018484 _atom_sites.fract_transf_matrix[1][2] 0.003526 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013683 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013072 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 0ZL A 1 327 2 0ZL 0AG . D 2 0ZL B 1 327 2 0ZL 0AG . E 3 HOH A 1 328 328 HOH HOH . E 3 HOH A 2 329 329 HOH HOH . E 3 HOH A 3 330 330 HOH HOH . E 3 HOH A 4 331 331 HOH HOH . E 3 HOH A 5 332 332 HOH HOH . E 3 HOH A 6 333 333 HOH HOH . E 3 HOH A 7 334 334 HOH HOH . E 3 HOH A 8 335 335 HOH HOH . E 3 HOH A 9 336 336 HOH HOH . E 3 HOH A 10 337 337 HOH HOH . E 3 HOH A 11 338 338 HOH HOH . E 3 HOH A 12 339 339 HOH HOH . E 3 HOH A 13 340 340 HOH HOH . E 3 HOH A 14 341 341 HOH HOH . E 3 HOH A 15 342 342 HOH HOH . E 3 HOH A 16 343 343 HOH HOH . E 3 HOH A 17 344 344 HOH HOH . E 3 HOH A 18 345 345 HOH HOH . E 3 HOH A 19 346 346 HOH HOH . E 3 HOH A 20 347 347 HOH HOH . E 3 HOH A 21 348 348 HOH HOH . E 3 HOH A 22 349 349 HOH HOH . E 3 HOH A 23 350 350 HOH HOH . E 3 HOH A 24 351 351 HOH HOH . E 3 HOH A 25 352 352 HOH HOH . E 3 HOH A 26 353 353 HOH HOH . E 3 HOH A 27 354 354 HOH HOH . E 3 HOH A 28 355 355 HOH HOH . E 3 HOH A 29 356 356 HOH HOH . E 3 HOH A 30 357 357 HOH HOH . E 3 HOH A 31 358 358 HOH HOH . E 3 HOH A 32 359 359 HOH HOH . E 3 HOH A 33 360 360 HOH HOH . E 3 HOH A 34 361 361 HOH HOH . E 3 HOH A 35 362 362 HOH HOH . E 3 HOH A 36 363 363 HOH HOH . E 3 HOH A 37 364 364 HOH HOH . E 3 HOH A 38 365 365 HOH HOH . E 3 HOH A 39 366 366 HOH HOH . E 3 HOH A 40 367 367 HOH HOH . E 3 HOH A 41 368 368 HOH HOH . E 3 HOH A 42 369 369 HOH HOH . E 3 HOH A 43 370 370 HOH HOH . E 3 HOH A 44 371 371 HOH HOH . E 3 HOH A 45 372 372 HOH HOH . E 3 HOH A 46 373 373 HOH HOH . E 3 HOH A 47 374 374 HOH HOH . E 3 HOH A 48 375 375 HOH HOH . E 3 HOH A 49 376 376 HOH HOH . E 3 HOH A 50 377 377 HOH HOH . E 3 HOH A 51 378 378 HOH HOH . E 3 HOH A 52 379 379 HOH HOH . E 3 HOH A 53 380 380 HOH HOH . E 3 HOH A 54 381 327 HOH HOH . F 3 HOH B 1 328 328 HOH HOH . F 3 HOH B 2 329 329 HOH HOH . F 3 HOH B 3 330 330 HOH HOH . F 3 HOH B 4 331 331 HOH HOH . F 3 HOH B 5 332 332 HOH HOH . F 3 HOH B 6 333 333 HOH HOH . F 3 HOH B 7 334 334 HOH HOH . F 3 HOH B 8 335 335 HOH HOH . F 3 HOH B 9 336 336 HOH HOH . F 3 HOH B 10 337 337 HOH HOH . F 3 HOH B 11 338 338 HOH HOH . F 3 HOH B 12 339 339 HOH HOH . F 3 HOH B 13 340 340 HOH HOH . F 3 HOH B 14 341 341 HOH HOH . F 3 HOH B 15 342 342 HOH HOH . F 3 HOH B 16 343 343 HOH HOH . F 3 HOH B 17 344 344 HOH HOH . F 3 HOH B 18 345 345 HOH HOH . F 3 HOH B 19 346 346 HOH HOH . F 3 HOH B 20 347 347 HOH HOH . F 3 HOH B 21 348 348 HOH HOH . F 3 HOH B 22 349 349 HOH HOH . F 3 HOH B 23 350 350 HOH HOH . F 3 HOH B 24 351 351 HOH HOH . F 3 HOH B 25 352 352 HOH HOH . F 3 HOH B 26 353 353 HOH HOH . F 3 HOH B 27 354 354 HOH HOH . F 3 HOH B 28 355 355 HOH HOH . F 3 HOH B 29 356 356 HOH HOH . F 3 HOH B 30 357 357 HOH HOH . F 3 HOH B 31 358 358 HOH HOH . F 3 HOH B 32 359 359 HOH HOH . F 3 HOH B 33 360 360 HOH HOH . F 3 HOH B 34 361 361 HOH HOH . F 3 HOH B 35 362 362 HOH HOH . F 3 HOH B 36 363 363 HOH HOH . F 3 HOH B 37 364 364 HOH HOH . F 3 HOH B 38 365 365 HOH HOH . F 3 HOH B 39 366 366 HOH HOH . F 3 HOH B 40 367 367 HOH HOH . F 3 HOH B 41 368 368 HOH HOH . F 3 HOH B 42 369 369 HOH HOH . F 3 HOH B 43 370 370 HOH HOH . F 3 HOH B 44 371 371 HOH HOH . F 3 HOH B 45 372 372 HOH HOH . F 3 HOH B 46 373 373 HOH HOH . F 3 HOH B 47 374 374 HOH HOH . F 3 HOH B 48 375 375 HOH HOH . F 3 HOH B 49 376 376 HOH HOH . F 3 HOH B 50 377 377 HOH HOH . F 3 HOH B 51 378 378 HOH HOH . F 3 HOH B 52 379 379 HOH HOH . F 3 HOH B 53 380 380 HOH HOH . F 3 HOH B 54 381 381 HOH HOH . F 3 HOH B 55 382 382 HOH HOH . F 3 HOH B 56 383 327 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C3 0ZL . . . D 2 34.599 36.708 -6.166 1 3.11 ? C3 0ZL 327 B 1 HETATM 2 C C4 0ZL . . . D 2 33.205 37.252 -5.819 1 2 ? C4 0ZL 327 B 1 HETATM 3 O O2 0ZL . . . D 2 32.905 36.961 -4.505 1 7.39 ? O2 0ZL 327 B 1 HETATM 4 C C1 0ZL . . . D 2 31.564 36.862 -3.995 1 11.11 ? C1 0ZL 327 B 1 HETATM 5 O O1 0ZL . . . D 2 30.615 36.844 -4.786 1 16.58 ? O1 0ZL 327 B 1 HETATM 6 N N 0ZL . . . D 2 31.383 36.74 -2.679 1 10.63 ? N 0ZL 327 B 1 HETATM 7 C CA 0ZL . . . D 2 30.064 36.782 -2.055 1 9.17 ? CA 0ZL 327 B 1 HETATM 8 C C 0ZL . . . D 2 29.752 38.278 -1.914 1 9.68 ? C 0ZL 327 B 1 HETATM 9 O O 0ZL . . . D 2 30.676 39.116 -1.786 1 10.86 ? O 0ZL 327 B 1 HETATM 10 C CB 0ZL . . . D 2 30.095 36.182 -0.653 1 8.9 ? CB 0ZL 327 B 1 HETATM 11 C CG 0ZL . . . D 2 30.763 34.837 -0.34 1 9.74 ? CG 0ZL 327 B 1 HETATM 12 C CD1 0ZL . . . D 2 31.133 34.84 1.132 1 10.93 ? CD1 0ZL 327 B 1 HETATM 13 C CD2 0ZL . . . D 2 29.846 33.662 -0.633 1 7.8 ? CD2 0ZL 327 B 1 HETATM 14 N N1 0ZL . . . D 2 28.487 38.691 -1.951 1 8.85 ? N1 0ZL 327 B 1 HETATM 15 C CA1 0ZL . . . D 2 28.171 40.068 -1.616 1 6.61 ? CA1 0ZL 327 B 1 HETATM 16 C C2 0ZL . . . D 2 27.043 39.931 -0.617 1 4.49 ? C2 0ZL 327 B 1 HETATM 17 O O3 0ZL . . . D 2 25.881 39.825 -1.01 1 2.81 ? O3 0ZL 327 B 1 HETATM 18 C CB1 0ZL . . . D 2 27.703 40.83 -2.831 1 8.14 ? CB1 0ZL 327 B 1 HETATM 19 C CG1 0ZL . . . D 2 28.118 42.293 -2.837 1 10.6 ? CG1 0ZL 327 B 1 HETATM 20 C CD11 0ZL . . . D 2 29.379 42.44 -3.687 1 12.28 ? CD11 0ZL 327 B 1 HETATM 21 C CD21 0ZL . . . D 2 27.012 43.156 -3.416 1 11.98 ? CD21 0ZL 327 B 1 HETATM 22 C C11 0ZL . . . D 2 26.287 39.669 1.677 1 2.2 ? C11 0ZL 327 B 1 HETATM 23 N N2 0ZL . . . D 2 27.339 39.833 0.682 1 2.68 ? N2 0ZL 327 B 1 HETATM 24 C C21 0ZL . . . D 2 26.002 40.886 2.578 1 2.55 ? C21 0ZL 327 B 1 HETATM 25 O O21 0ZL . . . D 2 27.251 41.247 3.147 1 2 ? O21 0ZL 327 B 1 HETATM 26 C C31 0ZL . . . D 2 25.516 42.126 1.77 1 3.75 ? C31 0ZL 327 B 1 HETATM 27 O O31 0ZL . . . D 2 24.301 41.738 1.134 1 2.56 ? O31 0ZL 327 B 1 HETATM 28 C C41 0ZL . . . D 2 25.421 43.485 2.498 1 2.22 ? C41 0ZL 327 B 1 HETATM 29 C C5 0ZL . . . D 2 24.923 44.72 1.741 1 2 ? C5 0ZL 327 B 1 HETATM 30 C C6 0ZL . . . D 2 25.636 44.868 0.44 1 2 ? C6 0ZL 327 B 1 HETATM 31 C C7 0ZL . . . D 2 25.252 45.96 2.502 1 2 ? C7 0ZL 327 B 1 HETATM 32 C C7' 0ZL . . . D 2 26.639 38.464 2.513 1 2 ? C7' 0ZL 327 B 1 HETATM 33 C C1' 0ZL . . . D 2 26.71 37.116 1.842 1 2 ? C1' 0ZL 327 B 1 HETATM 34 C C2' 0ZL . . . D 2 25.433 36.784 1.114 1 2.02 ? C2' 0ZL 327 B 1 HETATM 35 C C6' 0ZL . . . D 2 26.927 36.073 2.906 1 2 ? C6' 0ZL 327 B 1 HETATM 36 C C3' 0ZL . . . D 2 25.708 35.576 0.307 1 2.01 ? C3' 0ZL 327 B 1 HETATM 37 C C5' 0ZL . . . D 2 27.218 34.761 2.224 1 2.15 ? C5' 0ZL 327 B 1 HETATM 38 C C4' 0ZL . . . D 2 26.054 34.46 1.282 1 5.32 ? C4' 0ZL 327 B 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 288 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 38 #