data_1PU8
#
_model_server_result.job_id            fwybfbv-SK9knPyFp54eQw 
_model_server_result.datetime_utc      '2024-11-22 20:50:22' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1pu8 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":219}' 
#
_entry.id    1PU8 
#
_exptl.entry_id    1PU8 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              159.148 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            3H-IMIDAZO[2,1-I]PURINE 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          106.4 
_cell.angle_gamma         90 
_cell.entry_id            1PU8 
_cell.length_a            146.605 
_cell.length_b            44.399 
_cell.length_c            81.516 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1PU8 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,G 1 1 
B,E,F,H 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A SG CYS 83 A CYS 83 1_555 D S2 BME . A BME 983 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? 
covale ? covale2 A C GLY 204 A GLY 204 1_555 A N KCX 205 A KCX 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? 
covale ? covale3 A C KCX 205 A KCX 205 1_555 A N ILE 206 A ILE 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale4 B SG CYS 83 B CYS 83 1_555 F S2 BME . B BME 983 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
covale ? covale5 B C GLY 204 B GLY 204 1_555 B N KCX 205 B KCX 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? 
covale ? covale6 B C KCX 205 B KCX 205 1_555 B N ILE 206 B ILE 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
#
_chem_comp.formula           'C7 H5 N5' 
_chem_comp.formula_weight    159.148 
_chem_comp.id                EA1 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              3H-IMIDAZO[2,1-I]PURINE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     1,N6-ETHENOADENINE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N7 C8 EA1 doub 92 n y 
N7 C5 EA1 sing 93 n y 
C8 N9 EA1 sing 94 n y 
C8 H8 EA1 sing 95 n n 
C5 C4 EA1 doub 96 n y 
C5 C6 EA1 sing 97 n y 
C4 N3 EA1 sing 98 n y 
C4 N9 EA1 sing 99 n y 
N3 C2 EA1 doub 100 n y 
N9 HN9 EA1 sing 101 n n 
C6 N6 EA1 doub 102 n y 
C6 N1 EA1 sing 103 n y 
N6 C11 EA1 sing 104 n y 
C11 C10 EA1 doub 105 n y 
C11 H11 EA1 sing 106 n n 
N1 C10 EA1 sing 107 n y 
N1 C2 EA1 sing 108 n y 
C10 H10 EA1 sing 109 n n 
C2 H2 EA1 sing 110 n n 
#
_atom_sites.entry_id                     1PU8 
_atom_sites.fract_transf_matrix[1][1]    0.006821 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002008 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.022523 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012788 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 EA1 A 1 219 219 EA1 EDA . 
D 3 BME A 1 983 983 BME SEO . 
E 2 EA1 B 1 220 219 EA1 EDA . 
F 3 BME B 1 983 983 BME SEO . 
G 4 HOH A 1 301 301 HOH HOH . 
G 4 HOH A 2 302 302 HOH HOH . 
G 4 HOH A 3 306 306 HOH HOH . 
G 4 HOH A 4 308 308 HOH HOH . 
G 4 HOH A 5 309 309 HOH HOH . 
G 4 HOH A 6 312 312 HOH HOH . 
G 4 HOH A 7 313 313 HOH HOH . 
G 4 HOH A 8 316 316 HOH HOH . 
G 4 HOH A 9 317 317 HOH HOH . 
G 4 HOH A 10 318 318 HOH HOH . 
G 4 HOH A 11 322 322 HOH HOH . 
G 4 HOH A 12 327 327 HOH HOH . 
G 4 HOH A 13 329 329 HOH HOH . 
G 4 HOH A 14 334 334 HOH HOH . 
G 4 HOH A 15 338 338 HOH HOH . 
G 4 HOH A 16 341 341 HOH HOH . 
G 4 HOH A 17 345 345 HOH HOH . 
G 4 HOH A 18 348 348 HOH HOH . 
G 4 HOH A 19 349 349 HOH HOH . 
G 4 HOH A 20 350 350 HOH HOH . 
G 4 HOH A 21 351 351 HOH HOH . 
G 4 HOH A 22 353 353 HOH HOH . 
G 4 HOH A 23 356 356 HOH HOH . 
G 4 HOH A 24 358 358 HOH HOH . 
G 4 HOH A 25 360 360 HOH HOH . 
G 4 HOH A 26 361 361 HOH HOH . 
G 4 HOH A 27 362 362 HOH HOH . 
G 4 HOH A 28 365 365 HOH HOH . 
G 4 HOH A 29 366 366 HOH HOH . 
G 4 HOH A 30 367 367 HOH HOH . 
G 4 HOH A 31 368 368 HOH HOH . 
G 4 HOH A 32 369 369 HOH HOH . 
G 4 HOH A 33 370 370 HOH HOH . 
G 4 HOH A 34 374 374 HOH HOH . 
G 4 HOH A 35 376 376 HOH HOH . 
G 4 HOH A 36 378 378 HOH HOH . 
G 4 HOH A 37 379 379 HOH HOH . 
G 4 HOH A 38 381 381 HOH HOH . 
G 4 HOH A 39 384 384 HOH HOH . 
G 4 HOH A 40 385 385 HOH HOH . 
G 4 HOH A 41 386 386 HOH HOH . 
G 4 HOH A 42 387 387 HOH HOH . 
G 4 HOH A 43 389 389 HOH HOH . 
G 4 HOH A 44 390 390 HOH HOH . 
G 4 HOH A 45 391 391 HOH HOH . 
G 4 HOH A 46 392 392 HOH HOH . 
G 4 HOH A 47 393 393 HOH HOH . 
G 4 HOH A 48 396 396 HOH HOH . 
G 4 HOH A 49 397 397 HOH HOH . 
G 4 HOH A 50 400 400 HOH HOH . 
G 4 HOH A 51 401 401 HOH HOH . 
G 4 HOH A 52 407 407 HOH HOH . 
G 4 HOH A 53 408 408 HOH HOH . 
G 4 HOH A 54 410 410 HOH HOH . 
G 4 HOH A 55 412 412 HOH HOH . 
G 4 HOH A 56 413 413 HOH HOH . 
G 4 HOH A 57 426 426 HOH HOH . 
G 4 HOH A 58 427 427 HOH HOH . 
G 4 HOH A 59 428 428 HOH HOH . 
G 4 HOH A 60 429 429 HOH HOH . 
G 4 HOH A 61 430 430 HOH HOH . 
G 4 HOH A 62 431 431 HOH HOH . 
G 4 HOH A 63 432 432 HOH HOH . 
G 4 HOH A 64 433 433 HOH HOH . 
G 4 HOH A 65 434 434 HOH HOH . 
G 4 HOH A 66 435 435 HOH HOH . 
G 4 HOH A 67 436 436 HOH HOH . 
G 4 HOH A 68 437 437 HOH HOH . 
G 4 HOH A 69 450 450 HOH HOH . 
G 4 HOH A 70 452 452 HOH HOH . 
G 4 HOH A 71 453 453 HOH HOH . 
G 4 HOH A 72 454 454 HOH HOH . 
G 4 HOH A 73 455 455 HOH HOH . 
G 4 HOH A 74 458 458 HOH HOH . 
G 4 HOH A 75 459 459 HOH HOH . 
H 4 HOH B 1 303 303 HOH HOH . 
H 4 HOH B 2 304 304 HOH HOH . 
H 4 HOH B 3 305 305 HOH HOH . 
H 4 HOH B 4 307 307 HOH HOH . 
H 4 HOH B 5 310 310 HOH HOH . 
H 4 HOH B 6 311 311 HOH HOH . 
H 4 HOH B 7 314 314 HOH HOH . 
H 4 HOH B 8 315 315 HOH HOH . 
H 4 HOH B 9 319 319 HOH HOH . 
H 4 HOH B 10 320 320 HOH HOH . 
H 4 HOH B 11 321 321 HOH HOH . 
H 4 HOH B 12 323 323 HOH HOH . 
H 4 HOH B 13 324 324 HOH HOH . 
H 4 HOH B 14 325 325 HOH HOH . 
H 4 HOH B 15 326 326 HOH HOH . 
H 4 HOH B 16 328 328 HOH HOH . 
H 4 HOH B 17 330 330 HOH HOH . 
H 4 HOH B 18 331 331 HOH HOH . 
H 4 HOH B 19 332 332 HOH HOH . 
H 4 HOH B 20 333 333 HOH HOH . 
H 4 HOH B 21 335 335 HOH HOH . 
H 4 HOH B 22 336 336 HOH HOH . 
H 4 HOH B 23 337 337 HOH HOH . 
H 4 HOH B 24 339 339 HOH HOH . 
H 4 HOH B 25 340 340 HOH HOH . 
H 4 HOH B 26 342 342 HOH HOH . 
H 4 HOH B 27 343 343 HOH HOH . 
H 4 HOH B 28 344 344 HOH HOH . 
H 4 HOH B 29 346 346 HOH HOH . 
H 4 HOH B 30 347 347 HOH HOH . 
H 4 HOH B 31 352 352 HOH HOH . 
H 4 HOH B 32 354 354 HOH HOH . 
H 4 HOH B 33 355 355 HOH HOH . 
H 4 HOH B 34 357 357 HOH HOH . 
H 4 HOH B 35 359 359 HOH HOH . 
H 4 HOH B 36 363 363 HOH HOH . 
H 4 HOH B 37 364 364 HOH HOH . 
H 4 HOH B 38 371 371 HOH HOH . 
H 4 HOH B 39 372 372 HOH HOH . 
H 4 HOH B 40 373 373 HOH HOH . 
H 4 HOH B 41 375 375 HOH HOH . 
H 4 HOH B 42 377 377 HOH HOH . 
H 4 HOH B 43 380 380 HOH HOH . 
H 4 HOH B 44 382 382 HOH HOH . 
H 4 HOH B 45 383 383 HOH HOH . 
H 4 HOH B 46 388 388 HOH HOH . 
H 4 HOH B 47 394 394 HOH HOH . 
H 4 HOH B 48 395 395 HOH HOH . 
H 4 HOH B 49 398 398 HOH HOH . 
H 4 HOH B 50 399 399 HOH HOH . 
H 4 HOH B 51 402 402 HOH HOH . 
H 4 HOH B 52 403 403 HOH HOH . 
H 4 HOH B 53 404 404 HOH HOH . 
H 4 HOH B 54 405 405 HOH HOH . 
H 4 HOH B 55 406 406 HOH HOH . 
H 4 HOH B 56 409 409 HOH HOH . 
H 4 HOH B 57 411 411 HOH HOH . 
H 4 HOH B 58 414 414 HOH HOH . 
H 4 HOH B 59 415 415 HOH HOH . 
H 4 HOH B 60 416 416 HOH HOH . 
H 4 HOH B 61 417 417 HOH HOH . 
H 4 HOH B 62 418 418 HOH HOH . 
H 4 HOH B 63 419 419 HOH HOH . 
H 4 HOH B 64 420 420 HOH HOH . 
H 4 HOH B 65 421 421 HOH HOH . 
H 4 HOH B 66 422 422 HOH HOH . 
H 4 HOH B 67 423 423 HOH HOH . 
H 4 HOH B 68 424 424 HOH HOH . 
H 4 HOH B 69 425 425 HOH HOH . 
H 4 HOH B 70 438 438 HOH HOH . 
H 4 HOH B 71 439 439 HOH HOH . 
H 4 HOH B 72 440 440 HOH HOH . 
H 4 HOH B 73 441 441 HOH HOH . 
H 4 HOH B 74 442 442 HOH HOH . 
H 4 HOH B 75 443 443 HOH HOH . 
H 4 HOH B 76 444 444 HOH HOH . 
H 4 HOH B 77 445 445 HOH HOH . 
H 4 HOH B 78 446 446 HOH HOH . 
H 4 HOH B 79 447 447 HOH HOH . 
H 4 HOH B 80 448 448 HOH HOH . 
H 4 HOH B 81 449 449 HOH HOH . 
H 4 HOH B 82 451 451 HOH HOH . 
H 4 HOH B 83 456 456 HOH HOH . 
H 4 HOH B 84 457 457 HOH HOH . 
H 4 HOH B 85 460 460 HOH HOH . 
H 4 HOH B 86 461 461 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N7 EA1 . . . C 2 116.487 8.437 47.655 1 42.72 ? N7 EA1 219 A 1 
HETATM 2 C C8 EA1 . . . C 2 115.405 9.135 47.168 1 42.67 ? C8 EA1 219 A 1 
HETATM 3 C C5 EA1 . . . C 2 117.552 8.951 47.019 1 42.26 ? C5 EA1 219 A 1 
HETATM 4 C C4 EA1 . . . C 2 117.042 9.993 46.125 1 41.28 ? C4 EA1 219 A 1 
HETATM 5 N N3 EA1 . . . C 2 117.9 10.778 45.27 1 40.79 ? N3 EA1 219 A 1 
HETATM 6 N N9 EA1 . . . C 2 115.728 10.088 46.232 1 41.52 ? N9 EA1 219 A 1 
HETATM 7 C C6 EA1 . . . C 2 118.927 8.788 46.961 1 43.22 ? C6 EA1 219 A 1 
HETATM 8 N N6 EA1 . . . C 2 119.688 7.917 47.661 1 44.14 ? N6 EA1 219 A 1 
HETATM 9 C C11 EA1 . . . C 2 121.097 8.096 47.286 1 44.49 ? C11 EA1 219 A 1 
HETATM 10 N N1 EA1 . . . C 2 119.719 9.586 46.116 1 43.18 ? N1 EA1 219 A 1 
HETATM 11 C C10 EA1 . . . C 2 121.022 9.213 46.254 1 43.53 ? C10 EA1 219 A 1 
HETATM 12 C C2 EA1 . . . C 2 119.223 10.54 45.299 1 42.01 ? C2 EA1 219 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           295 
_model_server_stats.encode_time_ms          9 
_model_server_stats.element_count           12 
#