data_1PU8 # _model_server_result.job_id VZWv6TVw68rxQhd_mhxvJw _model_server_result.datetime_utc '2024-11-22 20:37:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1pu8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":983}' # _entry.id 1PU8 # _exptl.entry_id 1PU8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description BETA-MERCAPTOETHANOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 106.4 _cell.angle_gamma 90 _cell.entry_id 1PU8 _cell.length_a 146.605 _cell.length_b 44.399 _cell.length_c 81.516 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1PU8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,G 1 1 B,E,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 83 A CYS 83 1_555 D S2 BME . A BME 983 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? covale ? covale2 A C GLY 204 A GLY 204 1_555 A N KCX 205 A KCX 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale3 A C KCX 205 A KCX 205 1_555 A N ILE 206 A ILE 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale4 B SG CYS 83 B CYS 83 1_555 F S2 BME . B BME 983 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? covale ? covale5 B C GLY 204 B GLY 204 1_555 B N KCX 205 B KCX 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale6 B C KCX 205 B KCX 205 1_555 B N ILE 206 B ILE 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id BME _chem_comp.mon_nstd_flag . _chem_comp.name BETA-MERCAPTOETHANOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 BME sing 70 n n C1 O1 BME sing 71 n n C1 H11 BME sing 72 n n C1 H12 BME sing 73 n n C2 S2 BME sing 74 n n C2 H21 BME sing 75 n n C2 H22 BME sing 76 n n O1 HO1 BME sing 77 n n S2 HS2 BME sing 78 n n # _atom_sites.entry_id 1PU8 _atom_sites.fract_transf_matrix[1][1] 0.006821 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002008 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.022523 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012788 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 EA1 A 1 219 219 EA1 EDA . D 3 BME A 1 983 983 BME SEO . E 2 EA1 B 1 220 219 EA1 EDA . F 3 BME B 1 983 983 BME SEO . G 4 HOH A 1 301 301 HOH HOH . G 4 HOH A 2 302 302 HOH HOH . G 4 HOH A 3 306 306 HOH HOH . G 4 HOH A 4 308 308 HOH HOH . G 4 HOH A 5 309 309 HOH HOH . G 4 HOH A 6 312 312 HOH HOH . G 4 HOH A 7 313 313 HOH HOH . G 4 HOH A 8 316 316 HOH HOH . G 4 HOH A 9 317 317 HOH HOH . G 4 HOH A 10 318 318 HOH HOH . G 4 HOH A 11 322 322 HOH HOH . G 4 HOH A 12 327 327 HOH HOH . G 4 HOH A 13 329 329 HOH HOH . G 4 HOH A 14 334 334 HOH HOH . G 4 HOH A 15 338 338 HOH HOH . G 4 HOH A 16 341 341 HOH HOH . G 4 HOH A 17 345 345 HOH HOH . G 4 HOH A 18 348 348 HOH HOH . G 4 HOH A 19 349 349 HOH HOH . G 4 HOH A 20 350 350 HOH HOH . G 4 HOH A 21 351 351 HOH HOH . G 4 HOH A 22 353 353 HOH HOH . G 4 HOH A 23 356 356 HOH HOH . G 4 HOH A 24 358 358 HOH HOH . G 4 HOH A 25 360 360 HOH HOH . G 4 HOH A 26 361 361 HOH HOH . G 4 HOH A 27 362 362 HOH HOH . G 4 HOH A 28 365 365 HOH HOH . G 4 HOH A 29 366 366 HOH HOH . G 4 HOH A 30 367 367 HOH HOH . G 4 HOH A 31 368 368 HOH HOH . G 4 HOH A 32 369 369 HOH HOH . G 4 HOH A 33 370 370 HOH HOH . G 4 HOH A 34 374 374 HOH HOH . G 4 HOH A 35 376 376 HOH HOH . G 4 HOH A 36 378 378 HOH HOH . G 4 HOH A 37 379 379 HOH HOH . G 4 HOH A 38 381 381 HOH HOH . G 4 HOH A 39 384 384 HOH HOH . G 4 HOH A 40 385 385 HOH HOH . G 4 HOH A 41 386 386 HOH HOH . G 4 HOH A 42 387 387 HOH HOH . G 4 HOH A 43 389 389 HOH HOH . G 4 HOH A 44 390 390 HOH HOH . G 4 HOH A 45 391 391 HOH HOH . G 4 HOH A 46 392 392 HOH HOH . G 4 HOH A 47 393 393 HOH HOH . G 4 HOH A 48 396 396 HOH HOH . G 4 HOH A 49 397 397 HOH HOH . G 4 HOH A 50 400 400 HOH HOH . G 4 HOH A 51 401 401 HOH HOH . G 4 HOH A 52 407 407 HOH HOH . G 4 HOH A 53 408 408 HOH HOH . G 4 HOH A 54 410 410 HOH HOH . G 4 HOH A 55 412 412 HOH HOH . G 4 HOH A 56 413 413 HOH HOH . G 4 HOH A 57 426 426 HOH HOH . G 4 HOH A 58 427 427 HOH HOH . G 4 HOH A 59 428 428 HOH HOH . G 4 HOH A 60 429 429 HOH HOH . G 4 HOH A 61 430 430 HOH HOH . G 4 HOH A 62 431 431 HOH HOH . G 4 HOH A 63 432 432 HOH HOH . G 4 HOH A 64 433 433 HOH HOH . G 4 HOH A 65 434 434 HOH HOH . G 4 HOH A 66 435 435 HOH HOH . G 4 HOH A 67 436 436 HOH HOH . G 4 HOH A 68 437 437 HOH HOH . G 4 HOH A 69 450 450 HOH HOH . G 4 HOH A 70 452 452 HOH HOH . G 4 HOH A 71 453 453 HOH HOH . G 4 HOH A 72 454 454 HOH HOH . G 4 HOH A 73 455 455 HOH HOH . G 4 HOH A 74 458 458 HOH HOH . G 4 HOH A 75 459 459 HOH HOH . H 4 HOH B 1 303 303 HOH HOH . H 4 HOH B 2 304 304 HOH HOH . H 4 HOH B 3 305 305 HOH HOH . H 4 HOH B 4 307 307 HOH HOH . H 4 HOH B 5 310 310 HOH HOH . H 4 HOH B 6 311 311 HOH HOH . H 4 HOH B 7 314 314 HOH HOH . H 4 HOH B 8 315 315 HOH HOH . H 4 HOH B 9 319 319 HOH HOH . H 4 HOH B 10 320 320 HOH HOH . H 4 HOH B 11 321 321 HOH HOH . H 4 HOH B 12 323 323 HOH HOH . H 4 HOH B 13 324 324 HOH HOH . H 4 HOH B 14 325 325 HOH HOH . H 4 HOH B 15 326 326 HOH HOH . H 4 HOH B 16 328 328 HOH HOH . H 4 HOH B 17 330 330 HOH HOH . H 4 HOH B 18 331 331 HOH HOH . H 4 HOH B 19 332 332 HOH HOH . H 4 HOH B 20 333 333 HOH HOH . H 4 HOH B 21 335 335 HOH HOH . H 4 HOH B 22 336 336 HOH HOH . H 4 HOH B 23 337 337 HOH HOH . H 4 HOH B 24 339 339 HOH HOH . H 4 HOH B 25 340 340 HOH HOH . H 4 HOH B 26 342 342 HOH HOH . H 4 HOH B 27 343 343 HOH HOH . H 4 HOH B 28 344 344 HOH HOH . H 4 HOH B 29 346 346 HOH HOH . H 4 HOH B 30 347 347 HOH HOH . H 4 HOH B 31 352 352 HOH HOH . H 4 HOH B 32 354 354 HOH HOH . H 4 HOH B 33 355 355 HOH HOH . H 4 HOH B 34 357 357 HOH HOH . H 4 HOH B 35 359 359 HOH HOH . H 4 HOH B 36 363 363 HOH HOH . H 4 HOH B 37 364 364 HOH HOH . H 4 HOH B 38 371 371 HOH HOH . H 4 HOH B 39 372 372 HOH HOH . H 4 HOH B 40 373 373 HOH HOH . H 4 HOH B 41 375 375 HOH HOH . H 4 HOH B 42 377 377 HOH HOH . H 4 HOH B 43 380 380 HOH HOH . H 4 HOH B 44 382 382 HOH HOH . H 4 HOH B 45 383 383 HOH HOH . H 4 HOH B 46 388 388 HOH HOH . H 4 HOH B 47 394 394 HOH HOH . H 4 HOH B 48 395 395 HOH HOH . H 4 HOH B 49 398 398 HOH HOH . H 4 HOH B 50 399 399 HOH HOH . H 4 HOH B 51 402 402 HOH HOH . H 4 HOH B 52 403 403 HOH HOH . H 4 HOH B 53 404 404 HOH HOH . H 4 HOH B 54 405 405 HOH HOH . H 4 HOH B 55 406 406 HOH HOH . H 4 HOH B 56 409 409 HOH HOH . H 4 HOH B 57 411 411 HOH HOH . H 4 HOH B 58 414 414 HOH HOH . H 4 HOH B 59 415 415 HOH HOH . H 4 HOH B 60 416 416 HOH HOH . H 4 HOH B 61 417 417 HOH HOH . H 4 HOH B 62 418 418 HOH HOH . H 4 HOH B 63 419 419 HOH HOH . H 4 HOH B 64 420 420 HOH HOH . H 4 HOH B 65 421 421 HOH HOH . H 4 HOH B 66 422 422 HOH HOH . H 4 HOH B 67 423 423 HOH HOH . H 4 HOH B 68 424 424 HOH HOH . H 4 HOH B 69 425 425 HOH HOH . H 4 HOH B 70 438 438 HOH HOH . H 4 HOH B 71 439 439 HOH HOH . H 4 HOH B 72 440 440 HOH HOH . H 4 HOH B 73 441 441 HOH HOH . H 4 HOH B 74 442 442 HOH HOH . H 4 HOH B 75 443 443 HOH HOH . H 4 HOH B 76 444 444 HOH HOH . H 4 HOH B 77 445 445 HOH HOH . H 4 HOH B 78 446 446 HOH HOH . H 4 HOH B 79 447 447 HOH HOH . H 4 HOH B 80 448 448 HOH HOH . H 4 HOH B 81 449 449 HOH HOH . H 4 HOH B 82 451 451 HOH HOH . H 4 HOH B 83 456 456 HOH HOH . H 4 HOH B 84 457 457 HOH HOH . H 4 HOH B 85 460 460 HOH HOH . H 4 HOH B 86 461 461 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 BME . . . F 3 121.942 21.333 -13.377 1 30.78 ? C1 BME 983 B 1 HETATM 2 C C2 BME . . . F 3 123.114 22.233 -13.066 1 29.59 ? C2 BME 983 B 1 HETATM 3 O O1 BME . . . F 3 121.795 21.36 -14.786 1 32.87 ? O1 BME 983 B 1 HETATM 4 S S2 BME . . . F 3 122.613 23.929 -13.463 1 28.14 ? S2 BME 983 B 1 # _model_server_stats.io_time_ms 69 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 303 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 4 #