data_1PXM # _model_server_result.job_id '_uyNJb80nZLNmkfHycZxQw' _model_server_result.datetime_utc '2024-11-23 00:17:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1pxm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":500}' # _entry.id 1PXM # _exptl.entry_id 1PXM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 298.363 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-[4-(2,4-DIMETHYL-THIAZOL-5-YL)-PYRIMIDIN-2-YLAMINO]-PHENOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1PXM _cell.length_a 53.489 _cell.length_b 71.987 _cell.length_c 72.362 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1PXM _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C15 H14 N4 O S' _chem_comp.formula_weight 298.363 _chem_comp.id CK5 _chem_comp.mon_nstd_flag . _chem_comp.name 3-[4-(2,4-DIMETHYL-THIAZOL-5-YL)-PYRIMIDIN-2-YLAMINO]-PHENOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O7B C3B CK5 sing 70 n n O7B H7B CK5 sing 71 n n C3B C2B CK5 doub 72 n y C3B C4B CK5 sing 73 n y C2B C1B CK5 sing 74 n y C2B H2B CK5 sing 75 n n C1B C6B CK5 doub 76 n y C1B N7 CK5 sing 77 n n C6B C5B CK5 sing 78 n y C6B H6B CK5 sing 79 n n C5B C4B CK5 doub 80 n y C5B H5B CK5 sing 81 n n C4B H4B CK5 sing 82 n n N7 C2 CK5 sing 83 n n N7 HN7 CK5 sing 84 n n C2 N1 CK5 doub 85 n y C2 N3 CK5 sing 86 n y N1 C6 CK5 sing 87 n y C6 C5 CK5 doub 88 n y C6 H6 CK5 sing 89 n n N3 C4 CK5 doub 90 n y C4 C5 CK5 sing 91 n y C4 C5A CK5 sing 92 n y C5 H5 CK5 sing 93 n n C5A C1A CK5 doub 94 n y C5A S4A CK5 sing 95 n y C1A C6A CK5 sing 96 n n C1A N2A CK5 sing 97 n y C6A H6A1 CK5 sing 98 n n C6A H6A2 CK5 sing 99 n n C6A H6A3 CK5 sing 100 n n S4A C3A CK5 sing 101 n y C3A N2A CK5 doub 102 n y C3A C7A CK5 sing 103 n n C7A H7A1 CK5 sing 104 n n C7A H7A2 CK5 sing 105 n n C7A H7A3 CK5 sing 106 n n # _atom_sites.entry_id 1PXM _atom_sites.fract_transf_matrix[1][1] 0.018695 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013891 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013819 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CK5 A 1 500 500 CK5 CK5 . C 3 HOH A 1 501 501 HOH HOH . C 3 HOH A 2 502 502 HOH HOH . C 3 HOH A 3 503 503 HOH HOH . C 3 HOH A 4 504 504 HOH HOH . C 3 HOH A 5 505 505 HOH HOH . C 3 HOH A 6 506 506 HOH HOH . C 3 HOH A 7 507 507 HOH HOH . C 3 HOH A 8 508 508 HOH HOH . C 3 HOH A 9 509 509 HOH HOH . C 3 HOH A 10 510 510 HOH HOH . C 3 HOH A 11 511 511 HOH HOH . C 3 HOH A 12 512 512 HOH HOH . C 3 HOH A 13 513 513 HOH HOH . C 3 HOH A 14 514 514 HOH HOH . C 3 HOH A 15 515 515 HOH HOH . C 3 HOH A 16 516 516 HOH HOH . C 3 HOH A 17 517 517 HOH HOH . C 3 HOH A 18 518 518 HOH HOH . C 3 HOH A 19 519 519 HOH HOH . C 3 HOH A 20 520 520 HOH HOH . C 3 HOH A 21 521 521 HOH HOH . C 3 HOH A 22 522 522 HOH HOH . C 3 HOH A 23 523 523 HOH HOH . C 3 HOH A 24 524 524 HOH HOH . C 3 HOH A 25 525 525 HOH HOH . C 3 HOH A 26 526 526 HOH HOH . C 3 HOH A 27 527 527 HOH HOH . C 3 HOH A 28 528 528 HOH HOH . C 3 HOH A 29 529 529 HOH HOH . C 3 HOH A 30 530 530 HOH HOH . C 3 HOH A 31 531 531 HOH HOH . C 3 HOH A 32 532 532 HOH HOH . C 3 HOH A 33 533 533 HOH HOH . C 3 HOH A 34 534 534 HOH HOH . C 3 HOH A 35 535 535 HOH HOH . C 3 HOH A 36 536 536 HOH HOH . C 3 HOH A 37 537 537 HOH HOH . C 3 HOH A 38 538 538 HOH HOH . C 3 HOH A 39 539 539 HOH HOH . C 3 HOH A 40 540 540 HOH HOH . C 3 HOH A 41 541 541 HOH HOH . C 3 HOH A 42 542 542 HOH HOH . C 3 HOH A 43 543 543 HOH HOH . C 3 HOH A 44 544 544 HOH HOH . C 3 HOH A 45 545 545 HOH HOH . C 3 HOH A 46 546 546 HOH HOH . C 3 HOH A 47 547 547 HOH HOH . C 3 HOH A 48 548 548 HOH HOH . C 3 HOH A 49 549 549 HOH HOH . C 3 HOH A 50 550 550 HOH HOH . C 3 HOH A 51 551 551 HOH HOH . C 3 HOH A 52 552 552 HOH HOH . C 3 HOH A 53 553 553 HOH HOH . C 3 HOH A 54 554 554 HOH HOH . C 3 HOH A 55 555 555 HOH HOH . C 3 HOH A 56 556 556 HOH HOH . C 3 HOH A 57 557 557 HOH HOH . C 3 HOH A 58 558 558 HOH HOH . C 3 HOH A 59 559 559 HOH HOH . C 3 HOH A 60 560 560 HOH HOH . C 3 HOH A 61 561 561 HOH HOH . C 3 HOH A 62 562 562 HOH HOH . C 3 HOH A 63 563 563 HOH HOH . C 3 HOH A 64 564 564 HOH HOH . C 3 HOH A 65 565 565 HOH HOH . C 3 HOH A 66 566 566 HOH HOH . C 3 HOH A 67 567 567 HOH HOH . C 3 HOH A 68 568 568 HOH HOH . C 3 HOH A 69 569 569 HOH HOH . C 3 HOH A 70 570 570 HOH HOH . C 3 HOH A 71 571 571 HOH HOH . C 3 HOH A 72 572 572 HOH HOH . C 3 HOH A 73 573 573 HOH HOH . C 3 HOH A 74 574 574 HOH HOH . C 3 HOH A 75 575 575 HOH HOH . C 3 HOH A 76 576 576 HOH HOH . C 3 HOH A 77 577 577 HOH HOH . C 3 HOH A 78 578 578 HOH HOH . C 3 HOH A 79 579 579 HOH HOH . C 3 HOH A 80 580 580 HOH HOH . C 3 HOH A 81 581 581 HOH HOH . C 3 HOH A 82 582 582 HOH HOH . C 3 HOH A 83 583 583 HOH HOH . C 3 HOH A 84 584 584 HOH HOH . C 3 HOH A 85 585 585 HOH HOH . C 3 HOH A 86 586 586 HOH HOH . C 3 HOH A 87 587 587 HOH HOH . C 3 HOH A 88 588 588 HOH HOH . C 3 HOH A 89 589 589 HOH HOH . C 3 HOH A 90 590 590 HOH HOH . C 3 HOH A 91 591 591 HOH HOH . C 3 HOH A 92 592 592 HOH HOH . C 3 HOH A 93 593 593 HOH HOH . C 3 HOH A 94 594 594 HOH HOH . C 3 HOH A 95 595 595 HOH HOH . C 3 HOH A 96 596 596 HOH HOH . C 3 HOH A 97 597 597 HOH HOH . C 3 HOH A 98 598 598 HOH HOH . C 3 HOH A 99 599 599 HOH HOH . C 3 HOH A 100 600 600 HOH HOH . C 3 HOH A 101 601 601 HOH HOH . C 3 HOH A 102 602 602 HOH HOH . C 3 HOH A 103 603 603 HOH HOH . C 3 HOH A 104 604 604 HOH HOH . C 3 HOH A 105 605 605 HOH HOH . C 3 HOH A 106 606 606 HOH HOH . C 3 HOH A 107 607 607 HOH HOH . C 3 HOH A 108 608 608 HOH HOH . C 3 HOH A 109 609 609 HOH HOH . C 3 HOH A 110 610 610 HOH HOH . C 3 HOH A 111 611 611 HOH HOH . C 3 HOH A 112 612 612 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O7B CK5 . A . B 2 17.324 44.261 8.606 0.97 32.06 ? O7B CK5 500 A 1 HETATM 2 C C3B CK5 . A . B 2 17.6 45.23 9.526 0.97 32.41 ? C3B CK5 500 A 1 HETATM 3 C C2B CK5 . A . B 2 16.852 45.376 10.727 0.97 31.94 ? C2B CK5 500 A 1 HETATM 4 C C1B CK5 . A . B 2 17.167 46.42 11.675 0.97 31.79 ? C1B CK5 500 A 1 HETATM 5 C C6B CK5 . A . B 2 18.239 47.292 11.372 0.97 31.96 ? C6B CK5 500 A 1 HETATM 6 C C5B CK5 . A . B 2 18.992 47.149 10.178 0.97 33.45 ? C5B CK5 500 A 1 HETATM 7 C C4B CK5 . A . B 2 18.665 46.118 9.261 0.97 33.06 ? C4B CK5 500 A 1 HETATM 8 N N7 CK5 . A . B 2 16.486 46.686 12.947 0.97 29.73 ? N7 CK5 500 A 1 HETATM 9 C C2 CK5 . A . B 2 15.397 46 13.554 0.97 31.72 ? C2 CK5 500 A 1 HETATM 10 N N1 CK5 . A . B 2 15.24 46.299 14.844 0.97 35.57 ? N1 CK5 500 A 1 HETATM 11 C C6 CK5 . A . B 2 14.256 45.708 15.55 0.97 34.68 ? C6 CK5 500 A 1 HETATM 12 N N3 CK5 . A . B 2 14.644 45.144 12.907 0.97 32.62 ? N3 CK5 500 A 1 HETATM 13 C C4 CK5 . A . B 2 13.633 44.504 13.549 0.97 34.56 ? C4 CK5 500 A 1 HETATM 14 C C5 CK5 . A . B 2 13.394 44.77 14.935 0.97 35.27 ? C5 CK5 500 A 1 HETATM 15 C C5A CK5 . A . B 2 12.866 43.565 12.786 0.97 36.14 ? C5A CK5 500 A 1 HETATM 16 C C1A CK5 . A . B 2 11.617 42.926 12.883 0.97 36.92 ? C1A CK5 500 A 1 HETATM 17 C C6A CK5 . A . B 2 10.543 43.047 13.961 0.97 37.29 ? C6A CK5 500 A 1 HETATM 18 S S4A CK5 . A . B 2 13.619 43.001 11.328 0.97 35.81 ? S4A CK5 500 A 1 HETATM 19 C C3A CK5 . A . B 2 12.336 42.021 10.952 0.97 35.76 ? C3A CK5 500 A 1 HETATM 20 N N2A CK5 . A . B 2 11.347 42.057 11.828 0.97 37.8 ? N2A CK5 500 A 1 HETATM 21 C C7A CK5 . A . B 2 12.382 41.197 9.701 0.97 36.56 ? C7A CK5 500 A 1 # _model_server_stats.io_time_ms 52 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 305 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 21 #