data_1PXO # _model_server_result.job_id Qg02jfQLi2dechL2XdDsqg _model_server_result.datetime_utc '2024-11-08 22:12:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1pxo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":500}' # _entry.id 1PXO # _exptl.entry_id 1PXO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 328.349 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '[4-(2-AMINO-4-METHYL-THIAZOL-5-YL)-PYRIMIDIN-2-YL]-(3-NITRO-PHENYL)-AMINE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1PXO _cell.length_a 53.489 _cell.length_b 71.987 _cell.length_c 72.362 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1PXO _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C14 H12 N6 O2 S' _chem_comp.formula_weight 328.349 _chem_comp.id CK7 _chem_comp.mon_nstd_flag . _chem_comp.name '[4-(2-AMINO-4-METHYL-THIAZOL-5-YL)-PYRIMIDIN-2-YL]-(3-NITRO-PHENYL)-AMINE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N7A C3A CK7 sing 70 n n N7A H7A1 CK7 sing 71 n n N7A H7A2 CK7 sing 72 n n C3A N2A CK7 doub 73 n y C3A S4A CK7 sing 74 n y N2A C1A CK7 sing 75 n y C1A C6A CK7 sing 76 n n C1A C5A CK7 doub 77 n y C6A H6A1 CK7 sing 78 n n C6A H6A2 CK7 sing 79 n n C6A H6A3 CK7 sing 80 n n S4A C5A CK7 sing 81 n y C5A C4 CK7 sing 82 n y C4 N3 CK7 doub 83 n y C4 C5 CK7 sing 84 n y N3 C2 CK7 sing 85 n y C5 C6 CK7 doub 86 n y C5 H5 CK7 sing 87 n n C6 N1 CK7 sing 88 n y C6 H6 CK7 sing 89 n n N1 C2 CK7 doub 90 n y C2 N7 CK7 sing 91 n n N7 C1B CK7 sing 92 n n N7 HN7 CK7 sing 93 n n C1B C6B CK7 doub 94 n y C1B C2B CK7 sing 95 n y C6B C5B CK7 sing 96 n y C6B H6B CK7 sing 97 n n C2B C3B CK7 doub 98 n y C2B H2B CK7 sing 99 n n C3B N7B CK7 sing 100 n n C3B C4B CK7 sing 101 n y N7B O8B CK7 sing 102 n n N7B O9B CK7 doub 103 n n C4B C5B CK7 doub 104 n y C4B H4B CK7 sing 105 n n C5B H5B CK7 sing 106 n n # _atom_sites.entry_id 1PXO _atom_sites.fract_transf_matrix[1][1] 0.018695 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013891 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013819 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CK7 A 1 500 500 CK7 CK7 . C 3 HOH A 1 501 501 HOH HOH . C 3 HOH A 2 502 502 HOH HOH . C 3 HOH A 3 503 503 HOH HOH . C 3 HOH A 4 504 504 HOH HOH . C 3 HOH A 5 505 505 HOH HOH . C 3 HOH A 6 506 506 HOH HOH . C 3 HOH A 7 507 507 HOH HOH . C 3 HOH A 8 508 508 HOH HOH . C 3 HOH A 9 509 509 HOH HOH . C 3 HOH A 10 510 510 HOH HOH . C 3 HOH A 11 511 511 HOH HOH . C 3 HOH A 12 512 512 HOH HOH . C 3 HOH A 13 513 513 HOH HOH . C 3 HOH A 14 514 514 HOH HOH . C 3 HOH A 15 515 515 HOH HOH . C 3 HOH A 16 516 516 HOH HOH . C 3 HOH A 17 517 517 HOH HOH . C 3 HOH A 18 518 518 HOH HOH . C 3 HOH A 19 519 519 HOH HOH . C 3 HOH A 20 520 520 HOH HOH . C 3 HOH A 21 521 521 HOH HOH . C 3 HOH A 22 522 522 HOH HOH . C 3 HOH A 23 523 523 HOH HOH . C 3 HOH A 24 524 524 HOH HOH . C 3 HOH A 25 525 525 HOH HOH . C 3 HOH A 26 526 526 HOH HOH . C 3 HOH A 27 527 527 HOH HOH . C 3 HOH A 28 528 528 HOH HOH . C 3 HOH A 29 529 529 HOH HOH . C 3 HOH A 30 530 530 HOH HOH . C 3 HOH A 31 531 531 HOH HOH . C 3 HOH A 32 532 532 HOH HOH . C 3 HOH A 33 533 533 HOH HOH . C 3 HOH A 34 534 534 HOH HOH . C 3 HOH A 35 535 535 HOH HOH . C 3 HOH A 36 536 536 HOH HOH . C 3 HOH A 37 537 537 HOH HOH . C 3 HOH A 38 538 538 HOH HOH . C 3 HOH A 39 539 539 HOH HOH . C 3 HOH A 40 540 540 HOH HOH . C 3 HOH A 41 541 541 HOH HOH . C 3 HOH A 42 542 542 HOH HOH . C 3 HOH A 43 543 543 HOH HOH . C 3 HOH A 44 544 544 HOH HOH . C 3 HOH A 45 545 545 HOH HOH . C 3 HOH A 46 546 546 HOH HOH . C 3 HOH A 47 547 547 HOH HOH . C 3 HOH A 48 548 548 HOH HOH . C 3 HOH A 49 549 549 HOH HOH . C 3 HOH A 50 550 550 HOH HOH . C 3 HOH A 51 551 551 HOH HOH . C 3 HOH A 52 552 552 HOH HOH . C 3 HOH A 53 553 553 HOH HOH . C 3 HOH A 54 554 554 HOH HOH . C 3 HOH A 55 555 555 HOH HOH . C 3 HOH A 56 556 556 HOH HOH . C 3 HOH A 57 557 557 HOH HOH . C 3 HOH A 58 558 558 HOH HOH . C 3 HOH A 59 559 559 HOH HOH . C 3 HOH A 60 560 560 HOH HOH . C 3 HOH A 61 561 561 HOH HOH . C 3 HOH A 62 562 562 HOH HOH . C 3 HOH A 63 563 563 HOH HOH . C 3 HOH A 64 564 564 HOH HOH . C 3 HOH A 65 565 565 HOH HOH . C 3 HOH A 66 566 566 HOH HOH . C 3 HOH A 67 567 567 HOH HOH . C 3 HOH A 68 568 568 HOH HOH . C 3 HOH A 69 569 569 HOH HOH . C 3 HOH A 70 570 570 HOH HOH . C 3 HOH A 71 571 571 HOH HOH . C 3 HOH A 72 572 572 HOH HOH . C 3 HOH A 73 573 573 HOH HOH . C 3 HOH A 74 574 574 HOH HOH . C 3 HOH A 75 575 575 HOH HOH . C 3 HOH A 76 576 576 HOH HOH . C 3 HOH A 77 577 577 HOH HOH . C 3 HOH A 78 578 578 HOH HOH . C 3 HOH A 79 579 579 HOH HOH . C 3 HOH A 80 580 580 HOH HOH . C 3 HOH A 81 581 581 HOH HOH . C 3 HOH A 82 582 582 HOH HOH . C 3 HOH A 83 583 583 HOH HOH . C 3 HOH A 84 584 584 HOH HOH . C 3 HOH A 85 585 585 HOH HOH . C 3 HOH A 86 586 586 HOH HOH . C 3 HOH A 87 587 587 HOH HOH . C 3 HOH A 88 588 588 HOH HOH . C 3 HOH A 89 589 589 HOH HOH . C 3 HOH A 90 590 590 HOH HOH . C 3 HOH A 91 591 591 HOH HOH . C 3 HOH A 92 592 592 HOH HOH . C 3 HOH A 93 593 593 HOH HOH . C 3 HOH A 94 594 594 HOH HOH . C 3 HOH A 95 595 595 HOH HOH . C 3 HOH A 96 596 596 HOH HOH . C 3 HOH A 97 597 597 HOH HOH . C 3 HOH A 98 598 598 HOH HOH . C 3 HOH A 99 599 599 HOH HOH . C 3 HOH A 100 600 600 HOH HOH . C 3 HOH A 101 601 601 HOH HOH . C 3 HOH A 102 602 602 HOH HOH . C 3 HOH A 103 603 603 HOH HOH . C 3 HOH A 104 604 604 HOH HOH . C 3 HOH A 105 605 605 HOH HOH . C 3 HOH A 106 606 606 HOH HOH . C 3 HOH A 107 607 607 HOH HOH . C 3 HOH A 108 608 608 HOH HOH . C 3 HOH A 109 609 609 HOH HOH . C 3 HOH A 110 610 610 HOH HOH . C 3 HOH A 111 611 611 HOH HOH . C 3 HOH A 112 612 612 HOH HOH . C 3 HOH A 113 613 613 HOH HOH . C 3 HOH A 114 614 614 HOH HOH . C 3 HOH A 115 615 615 HOH HOH . C 3 HOH A 116 616 616 HOH HOH . C 3 HOH A 117 617 617 HOH HOH . C 3 HOH A 118 618 618 HOH HOH . C 3 HOH A 119 619 619 HOH HOH . C 3 HOH A 120 620 620 HOH HOH . C 3 HOH A 121 621 621 HOH HOH . C 3 HOH A 122 622 622 HOH HOH . C 3 HOH A 123 623 623 HOH HOH . C 3 HOH A 124 624 624 HOH HOH . C 3 HOH A 125 625 625 HOH HOH . C 3 HOH A 126 626 626 HOH HOH . C 3 HOH A 127 627 627 HOH HOH . C 3 HOH A 128 628 628 HOH HOH . C 3 HOH A 129 629 629 HOH HOH . C 3 HOH A 130 630 630 HOH HOH . C 3 HOH A 131 631 631 HOH HOH . C 3 HOH A 132 632 632 HOH HOH . C 3 HOH A 133 633 633 HOH HOH . C 3 HOH A 134 634 634 HOH HOH . C 3 HOH A 135 635 635 HOH HOH . C 3 HOH A 136 636 636 HOH HOH . C 3 HOH A 137 637 637 HOH HOH . C 3 HOH A 138 638 638 HOH HOH . C 3 HOH A 139 639 639 HOH HOH . C 3 HOH A 140 640 640 HOH HOH . C 3 HOH A 141 641 641 HOH HOH . C 3 HOH A 142 642 642 HOH HOH . C 3 HOH A 143 643 643 HOH HOH . C 3 HOH A 144 644 644 HOH HOH . C 3 HOH A 145 645 645 HOH HOH . C 3 HOH A 146 646 646 HOH HOH . C 3 HOH A 147 647 647 HOH HOH . C 3 HOH A 148 648 648 HOH HOH . C 3 HOH A 149 649 649 HOH HOH . C 3 HOH A 150 650 650 HOH HOH . C 3 HOH A 151 651 651 HOH HOH . C 3 HOH A 152 652 652 HOH HOH . C 3 HOH A 153 653 653 HOH HOH . C 3 HOH A 154 654 654 HOH HOH . C 3 HOH A 155 655 655 HOH HOH . C 3 HOH A 156 656 656 HOH HOH . C 3 HOH A 157 657 657 HOH HOH . C 3 HOH A 158 658 658 HOH HOH . C 3 HOH A 159 659 659 HOH HOH . C 3 HOH A 160 660 660 HOH HOH . C 3 HOH A 161 661 661 HOH HOH . C 3 HOH A 162 662 662 HOH HOH . C 3 HOH A 163 663 663 HOH HOH . C 3 HOH A 164 664 664 HOH HOH . C 3 HOH A 165 665 665 HOH HOH . C 3 HOH A 166 666 666 HOH HOH . C 3 HOH A 167 667 667 HOH HOH . C 3 HOH A 168 668 668 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N7A CK7 . A . B 2 14.702 -5.255 10.131 0.8 42.53 ? N7A CK7 500 A 1 HETATM 2 C C3A CK7 . A . B 2 14.766 -5.99 11.431 0.8 41.55 ? C3A CK7 500 A 1 HETATM 3 N N2A CK7 . A . B 2 15.496 -5.869 12.565 0.8 41.63 ? N2A CK7 500 A 1 HETATM 4 C C1A CK7 . A . B 2 15.196 -6.804 13.535 0.8 40.96 ? C1A CK7 500 A 1 HETATM 5 C C6A CK7 . A . B 2 15.897 -6.811 14.862 0.8 39.47 ? C6A CK7 500 A 1 HETATM 6 S S4A CK7 . A . B 2 13.699 -7.276 11.407 0.8 42.08 ? S4A CK7 500 A 1 HETATM 7 C C5A CK7 . A . B 2 14.189 -7.77 12.913 0.8 40.43 ? C5A CK7 500 A 1 HETATM 8 C C4 CK7 . A . B 2 13.279 -8.808 13.466 0.8 39.96 ? C4 CK7 500 A 1 HETATM 9 N N3 CK7 . A . B 2 12.373 -9.371 12.601 0.8 39.45 ? N3 CK7 500 A 1 HETATM 10 C C5 CK7 . A . B 2 13.358 -9.211 14.79 0.8 39.25 ? C5 CK7 500 A 1 HETATM 11 C C6 CK7 . A . B 2 12.43 -10.138 15.176 0.8 39.13 ? C6 CK7 500 A 1 HETATM 12 N N1 CK7 . A . B 2 11.525 -10.635 14.279 0.8 38.88 ? N1 CK7 500 A 1 HETATM 13 C C2 CK7 . A . B 2 11.505 -10.294 13.007 0.8 38.86 ? C2 CK7 500 A 1 HETATM 14 N N7 CK7 . A . B 2 10.578 -10.888 12.281 0.8 38 ? N7 CK7 500 A 1 HETATM 15 C C1B CK7 . C . B 2 10.052 -10.235 11.08 0.47 37.9 ? C1B CK7 500 A 1 HETATM 16 C C1B CK7 . D . B 2 10.061 -10.839 11.004 0.33 37.35 ? C1B CK7 500 A 1 HETATM 17 C C6B CK7 . C . B 2 8.805 -10.635 10.523 0.47 37.52 ? C6B CK7 500 A 1 HETATM 18 C C6B CK7 . D . B 2 10.069 -9.679 10.179 0.33 37.18 ? C6B CK7 500 A 1 HETATM 19 C C2B CK7 . C . B 2 10.71 -9.14 10.432 0.47 37.93 ? C2B CK7 500 A 1 HETATM 20 C C2B CK7 . D . B 2 9.461 -12.013 10.439 0.33 36.64 ? C2B CK7 500 A 1 HETATM 21 C C3B CK7 . C . B 2 10.184 -8.461 9.283 0.47 37.6 ? C3B CK7 500 A 1 HETATM 22 C C3B CK7 . D . B 2 8.9 -12.053 9.12 0.33 36.26 ? C3B CK7 500 A 1 HETATM 23 N N7B CK7 . C . B 2 10.78 -7.383 8.614 0.47 37.74 ? N7B CK7 500 A 1 HETATM 24 N N7B CK7 . D . B 2 8.324 -13.163 8.487 0.33 36 ? N7B CK7 500 A 1 HETATM 25 O O8B CK7 . C . B 2 10.445 -6.207 8.878 0.47 35.07 ? O8B CK7 500 A 1 HETATM 26 O O8B CK7 . D . B 2 7.839 -14.096 9.163 0.33 35.35 ? O8B CK7 500 A 1 HETATM 27 O O9B CK7 . C . B 2 11.657 -7.599 7.748 0.47 38.27 ? O9B CK7 500 A 1 HETATM 28 O O9B CK7 . D . B 2 8.303 -13.217 7.238 0.33 35.04 ? O9B CK7 500 A 1 HETATM 29 C C4B CK7 . C . B 2 8.96 -8.891 8.753 0.47 37.24 ? C4B CK7 500 A 1 HETATM 30 C C4B CK7 . D . B 2 8.937 -10.895 8.331 0.33 36.35 ? C4B CK7 500 A 1 HETATM 31 C C5B CK7 . C . B 2 8.269 -9.955 9.383 0.47 36.86 ? C5B CK7 500 A 1 HETATM 32 C C5B CK7 . D . B 2 9.517 -9.716 8.858 0.33 36.46 ? C5B CK7 500 A 1 # _model_server_stats.io_time_ms 53 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 32 #